Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:55:40 (875165): wrapper (7.7.26015): starting
03:55:40 (875165): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 03:55:40] Arguments: --nthreads 3
[2025-11-25 03:55:40] Threads: 3
[2025-11-25 03:55:40] Checking for CVMFS
[2025-11-25 03:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:55:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:55:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:55:40] 2.9.2.0 3836662 9253 90936 153266 2 81 33695905 36864001 0 130560 0 3436285 99.925 487930 6849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 03:55:40] CVMFS is ok
[2025-11-25 03:55:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:55:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:55:40] Further information can be found at the LHC@home message board.
[2025-11-25 03:55:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:55:40] Checking for apptainer binary...
[2025-11-25 03:55:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:55:40] Running /usr/bin/apptainer --version
[2025-11-25 03:55:40] apptainer version 1.4.1-1.1
[2025-11-25 03:55:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:55:40] thA327
[2025-11-25 03:55:40] apptainer works
[2025-11-25 03:55:40] Set ATHENA_PROC_NUMBER=3
[2025-11-25 03:55:40] Set ATHENA_CORE_NUMBER=3
[2025-11-25 03:55:40] Starting ATLAS job with PandaID=6895330878
[2025-11-25 03:55:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:15:28]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:15:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:15:28] 
[2025-11-25 12:15:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:15:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:15:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:15:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:15:28] 
[2025-11-25 12:15:28] 2025-11-25 11:14:30,693 | INFO     | ***************************************
[2025-11-25 12:15:28] 2025-11-25 11:14:31,197 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | INFO     | sufficient remaining disk space (368166567936 B)
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | INFO     | update_server=False
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:15:28] 2025-11-25 11:14:31,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:15:28] 2025-11-25 11:14:31,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:15:28] 2025-11-25 11:14:31,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:15:28] 2025-11-25 11:14:31,442 | INFO     | aborting loop
[2025-11-25 12:15:28] 2025-11-25 11:14:31,448 | INFO     | all job control threads have been joined
[2025-11-25 12:15:28] 2025-11-25 11:14:31,623 | INFO     | all data control threads have been joined
[2025-11-25 12:15:28] 2025-11-25 11:14:31,782 | INFO     | all payload control threads have been joined
[2025-11-25 12:15:28] 2025-11-25 11:14:32,215 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,215 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,412 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,448 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,453 | INFO     | [job] control thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,629 | INFO     | [data] control thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,718 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,722 | INFO     | [job] validate thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,788 | INFO     | [payload] control thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,839 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:32,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:33,216 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:33,361 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:33,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:35,407 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:14:42,007 | INFO     | job.realtimelogging is not enabled
[2025-11-25 12:15:28] 2025-11-25 11:14:43,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:15:28] 2025-11-25 11:15:01,369 | INFO     | PID=878889 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:15:28] 2025-11-25 11:15:01,369 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:15:28] 2025-11-25 11:15:01,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:15:28] 2025-11-25 11:15:01,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:15:28] 2025-11-25 11:15:21,713 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:15:28] 2025-11-25 11:15:23,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764222543680)>', '<ExcThread(monitor, started 139763604518656)>']
[2025-11-25 12:15:28] 2025-11-25 11:15:23,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:15:28] 2025-11-25 11:15:23,487 | INFO     | [monitor] control thread has ended
[2025-11-25 12:15:28] 2025-11-25 11:15:28,383 | INFO     | all workflow threads have been joined
[2025-11-25 12:15:28] 2025-11-25 11:15:28,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:15:28] 2025-11-25 11:15:28,383 | INFO     | traces error code: 0
[2025-11-25 12:15:28] 2025-11-25 11:15:28,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:15:28] 2025-11-25 11:15:28,442 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:15:28] 2025-11-25 11:15:28,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:15:28] 2025-11-25 11:15:28,447 [wrapper] pilotpid: 878889
[2025-11-25 12:15:28] 2025-11-25 11:15:28,449 [wrapper] Pilot exit status: 0
[2025-11-25 12:15:28] 2025-11-25 11:15:28,456 [wrapper] pandaids: 6895330878
[2025-11-25 12:15:28] 2025-11-25 11:15:28,474 [wrapper] cleanup supervisor_pilot  938971 878890
[2025-11-25 12:15:28] 2025-11-25 11:15:28,476 [wrapper] Test setup, not cleaning
[2025-11-25 12:15:28] 2025-11-25 11:15:28,478 [wrapper] apfmon messages muted
[2025-11-25 12:15:28] 2025-11-25 11:15:28,481 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:15:28] 2025-11-25 11:15:28,483 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:15:28]  *** Error codes and diagnostics ***
[2025-11-25 12:15:28]     "exeErrorCode": 0,
[2025-11-25 12:15:28]     "exeErrorDiag": "",
[2025-11-25 12:15:28]     "pilotErrorCode": 0,
[2025-11-25 12:15:28]     "pilotErrorDiag": "",
[2025-11-25 12:15:28]  *** Listing of results directory ***
[2025-11-25 12:15:28] total 1327496
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc    576529 Nov 21 22:26 pilot3.tar.gz
[2025-11-25 12:15:28] -rwx------ 1 boinc boinc     36292 Nov 21 22:47 runpilot2-wrapper.sh
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      5112 Nov 21 22:47 queuedata.json
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc       100 Nov 25 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:15:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 03:55 run_atlas
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc       105 Nov 25 03:55 job.xml
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc 411152162 Nov 25 03:55 EVNT.47483658._000147.pool.root.1
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc    590102 Nov 25 03:55 input.tar.gz
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc     15847 Nov 25 03:55 start_atlas.sh
[2025-11-25 12:15:28] drwxrwx--x 2 boinc boinc      4096 Nov 25 03:55 shared
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc         0 Nov 25 03:55 boinc_setup_complete
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      6447 Nov 25 03:55 init_data.xml
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc         0 Nov 25 03:55 boinc_lockfile
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      2785 Nov 25 03:55 pandaJob.out
[2025-11-25 12:15:28] -rw------- 1 boinc boinc    991801 Nov 25 03:55 agis_schedconf.cvmfs.json
[2025-11-25 12:15:28] drwx------ 5 boinc boinc      4096 Nov 25 03:55 pilot3
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc       531 Nov 25 12:10 boinc_task_state.xml
[2025-11-25 12:15:28] -rw------- 1 boinc boinc 933535681 Nov 25 12:14 HITS.47556137._001470.pool.root.1
[2025-11-25 12:15:28] -rw------- 1 boinc boinc        95 Nov 25 12:14 pilot_heartbeat.json
[2025-11-25 12:15:28] -rw------- 1 boinc boinc      1022 Nov 25 12:14 memory_monitor_summary.json
[2025-11-25 12:15:28] -rw------- 1 boinc boinc   1516240 Nov 25 12:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:15:28] -rw------- 1 boinc boinc   1176683 Nov 25 12:14 log.47556137._001470.job.log.tgz.1
[2025-11-25 12:15:28] -rw------- 1 boinc boinc      8570 Nov 25 12:14 heartbeat.json
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:15 boinc_mmap_file
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:15 wrapper_checkpoint.txt
[2025-11-25 12:15:28] -rw------- 1 boinc boinc      4823 Nov 25 12:15 pilotlog.txt
[2025-11-25 12:15:28] -rw------- 1 boinc boinc   4205179 Nov 25 12:15 log.47556137._001470.job.log.1
[2025-11-25 12:15:28] -rw------- 1 boinc boinc       353 Nov 25 12:15 output.list
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:15 runtime_log
[2025-11-25 12:15:28] -rw------- 1 boinc boinc   5406720 Nov 25 12:15 result.tar.gz
[2025-11-25 12:15:28] -rw------- 1 boinc boinc       665 Nov 25 12:15 vkMLDmq9ng8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmApHKDmH0nefm.diag
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      8898 Nov 25 12:15 runtime_log.err
[2025-11-25 12:15:28] -rw-r--r-- 1 boinc boinc      8388 Nov 25 12:15 stderr.txt
[2025-11-25 12:15:28] HITS file was successfully produced:
[2025-11-25 12:15:28] -rw------- 1 boinc boinc 933535681 Nov 25 12:14 shared/HITS.pool.root.1
[2025-11-25 12:15:28]  *** Contents of shared directory: ***
[2025-11-25 12:15:28] total 1319052
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc 411152162 Nov 25 03:55 ATLAS.root_0
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc    590102 Nov 25 03:55 input.tar.gz
[2025-11-25 12:15:28] -rw-r--r-- 2 boinc boinc     15847 Nov 25 03:55 start_atlas.sh
[2025-11-25 12:15:28] -rw------- 1 boinc boinc 933535681 Nov 25 12:14 HITS.pool.root.1
[2025-11-25 12:15:28] -rw------- 1 boinc boinc   5406720 Nov 25 12:15 result.tar.gz
12:15:30 (875165): run_atlas exited; CPU time 88366.325234
12:15:30 (875165): called boinc_finish(0)

</stderr_txt>
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