Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 10:09:28 (6580): vboxwrapper version 26210
2025-11-22 10:09:28 (6580): BOINC client version: 8.0.2
2025-11-22 10:09:29 (6580): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-11-22 10:09:29 (6580): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 10:09:29 (6580): Create VM. (boinc_75cdf357690eef05, slot#0)
2025-11-22 10:09:30 (6580): Setting Memory Size for VM. (4200MB)
2025-11-22 10:09:30 (6580): Setting CPU Count for VM. (2)
2025-11-22 10:09:30 (6580): Setting Chipset Options for VM.
2025-11-22 10:09:31 (6580): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 10:09:31 (6580): Setting Boot Options for VM.
2025-11-22 10:09:31 (6580): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 10:09:32 (6580): Enabling VM Network Access.
2025-11-22 10:09:32 (6580): Disabling USB Support for VM.
2025-11-22 10:09:32 (6580): Disabling COM Port Support for VM.
2025-11-22 10:09:32 (6580): Disabling LPT Port Support for VM.
2025-11-22 10:09:33 (6580): Disabling Audio Support for VM.
2025-11-22 10:09:33 (6580): Disabling Clipboard Support for VM.
2025-11-22 10:09:33 (6580): Disabling Drag and Drop Support for VM.
2025-11-22 10:09:33 (6580): Adding storage controller(s) to VM.
2025-11-22 10:09:34 (6580): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 10:09:35 (6580): Adding VirtualBox Guest Additions to VM.
2025-11-22 10:09:35 (6580): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 10:09:35 (6580): forwarding host port 57210 to guest port 80
2025-11-22 10:09:36 (6580): Enabling remote desktop for VM.
2025-11-22 10:09:36 (6580): Required extension pack not installed, remote desktop not enabled.
2025-11-22 10:09:36 (6580): Enabling shared directory for VM.
2025-11-22 10:09:36 (6580): Starting VM using VBoxManage interface. (boinc_75cdf357690eef05, slot#0)
2025-11-22 10:09:41 (6580): Successfully started VM. (PID = '2412')
2025-11-22 10:09:41 (6580): Reporting VM Process ID to BOINC.
2025-11-22 10:09:41 (6580): Guest Log: BIOS: VirtualBox 7.0.10
2025-11-22 10:09:41 (6580): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 10:09:41 (6580): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 10:09:41 (6580): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 10:09:41 (6580): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 10:09:41 (6580): Detected: Web Application Enabled (http://localhost:57210)
2025-11-22 10:09:41 (6580): Preference change detected
2025-11-22 10:09:41 (6580): Setting CPU throttle for VM. (100%)
2025-11-22 10:09:42 (6580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 10:09:43 (6580): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 10:09:43 (6580): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 10:09:46 (6580): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 10:09:46 (6580): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 10:09:46 (6580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 10:09:50 (6580): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 10:09:50 (6580): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 10:09:54 (6580): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000079 main     Log opened 2025-11-22T10:09:52.598331000Z
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000139 main     OS Product: Linux
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000172 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000184 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000196 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000196 main     Process ID: 1260
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.000196 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 10:09:54 (6580): Guest Log: 00:00:00.002192 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 10:09:54 (6580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 10:09:54 (6580): Guest Log: [INFO] Mounting shared directory
2025-11-22 10:09:54 (6580): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 10:09:59 (6580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 10:09:59 (6580): Guest Log: [INFO] Detected branch: prod
2025-11-22 10:09:59 (6580): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 10:09:59 (6580): Guest Log: Copying input files
2025-11-22 10:10:00 (6580): Guest Log: Copied input files into RunAtlas.
2025-11-22 10:10:00 (6580): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 10:10:00 (6580): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 10:10:00 (6580): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 10:10:00 (6580): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 10:10:04 (6580): Guest Log: 00:00:10.020390 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 071 447 000ns (GuestNow=1 763 802 604 531 059 000 ns GuestLast=1 763 806 192 602 506 000 ns fSetTimeLastLoop=true )
2025-11-22 10:10:07 (6580): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 10:10:07 (6580): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 10:10:07 (6580): Guest Log: 2.6.3.0 1531 0 30120 153165 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 10:10:08 (6580): Guest Log: copied the webapp to /var/www
2025-11-22 10:10:08 (6580): Guest Log: ATHENA_PROC_NUMBER=2
2025-11-22 10:10:08 (6580): Guest Log: ATHENA_CORE_NUMBER=2
2025-11-22 10:10:08 (6580): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 10:10:08 (6580): Guest Log:  *** Starting ATLAS job. (PandaID=6894267842 taskID=47533967) ***
2025-11-22 11:49:45 (6580): Status Report: Elapsed Time: '6000.000000'
2025-11-22 11:49:45 (6580): Status Report: CPU Time: '10997.750000'
2025-11-22 13:29:49 (6580): Status Report: Elapsed Time: '12000.000000'
2025-11-22 13:29:49 (6580): Status Report: CPU Time: '22986.578125'
2025-11-22 15:09:52 (6580): Status Report: Elapsed Time: '18000.000000'
2025-11-22 15:09:52 (6580): Status Report: CPU Time: '34981.859375'
2025-11-22 16:49:58 (6580): Status Report: Elapsed Time: '24000.000000'
2025-11-22 16:49:58 (6580): Status Report: CPU Time: '46862.390625'
2025-11-22 18:30:02 (6580): Status Report: Elapsed Time: '30000.000000'
2025-11-22 18:30:02 (6580): Status Report: CPU Time: '58863.500000'
2025-11-22 20:10:06 (6580): Status Report: Elapsed Time: '36000.000000'
2025-11-22 20:10:06 (6580): Status Report: CPU Time: '70843.843750'
2025-11-22 21:50:10 (6580): Status Report: Elapsed Time: '42000.000000'
2025-11-22 21:50:10 (6580): Status Report: CPU Time: '82848.140625'
2025-11-22 22:47:43 (6580): Guest Log:  *** Job finished ***
2025-11-22 22:47:43 (6580): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:26,161 | INFO     | all workflow threads have been joined
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:26,161 | INFO     | end of generic workflow (traces error code: 0)
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:26,161 | INFO     | traces error code: 0
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:26,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,362 | INFO     | PID=5920 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,363 | INFO     | found 0 job(s) in 20 queues
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,363 | INFO     | [monitor] control thread has ended
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,417 [wrapper] ==== pilot stdout END ====
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,419 [wrapper] ==== wrapper stdout RESUME ====
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,421 [wrapper] pilotpid: 5920
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,423 [wrapper] Pilot exit status: 0
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,431 [wrapper] pandaids: 6894267842
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,444 [wrapper] cleanup supervisor_pilot  4830 5921
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,447 [wrapper] Test setup, not cleaning
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,449 [wrapper] apfmon messages muted
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,451 [wrapper] ==== wrapper stdout END ====
2025-11-22 22:47:43 (6580): Guest Log: 2025-11-22 21:47:41,454 [wrapper] ==== wrapper stderr END ====
2025-11-22 22:47:43 (6580): Guest Log:  *** Error codes and diagnostics ***
2025-11-22 22:47:43 (6580): Guest Log:     "exeErrorCode": 0,
2025-11-22 22:47:43 (6580): Guest Log:     "exeErrorDiag": "",
2025-11-22 22:47:43 (6580): Guest Log:     "pilotErrorCode": 0,
2025-11-22 22:47:43 (6580): Guest Log:     "pilotErrorDiag": "",
2025-11-22 22:47:43 (6580): Guest Log:  *** Listing of results directory ***
2025-11-22 22:47:43 (6580): Guest Log: total 914724
2025-11-22 22:47:43 (6580): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 05:09 pilot3.tar.gz
2025-11-22 22:47:43 (6580): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 05:31 queuedata.json
2025-11-22 22:47:43 (6580): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 05:31 runpilot2-wrapper.sh
2025-11-22 22:47:43 (6580): Guest Log: -rwxr-xr-x. 1 atlas atlas     12429 Nov 22 09:09 init_data.xml
2025-11-22 22:47:43 (6580): Guest Log: -rwxr-xr-x. 1 atlas atlas    590105 Nov 22 09:09 input.tar.gz
2025-11-22 22:47:43 (6580): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 22 09:09 start_atlas.sh
2025-11-22 22:47:43 (6580): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 09:09 EVNT.47493127._002256.pool.root.1 -> /data/./ATLAS.root_0
2025-11-22 22:47:43 (6580): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 22 09:10 pandaJob.out
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas    989760 Nov 22 09:11 agis_schedconf.cvmfs.json
2025-11-22 22:47:43 (6580): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 09:11 pilot3
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas 917828527 Nov 22 21:46 HITS.47533967._002273.pool.root.1
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 22 21:46 memory_monitor_summary.json
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 22 21:47 agis_ddmendpoints.agis.ALL.json
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas   1240578 Nov 22 21:47 log.47533967._002273.job.log.tgz.1
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas      8661 Nov 22 21:47 heartbeat.json
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas        95 Nov 22 21:47 pilot_heartbeat.json
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas       744 Nov 22 21:47 pilotlog.txt
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas   6258691 Nov 22 21:47 log.47533967._002273.job.log.1
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas       353 Nov 22 21:47 output.list
2025-11-22 22:47:43 (6580): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 22 21:47 runtime_log
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas   7516160 Nov 22 21:47 result.tar.gz
2025-11-22 22:47:43 (6580): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 22 21:47 runtime_log.err
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas       663 Nov 22 21:47 8TjNDmbvYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG7IKDmxnFRnm.diag
2025-11-22 22:47:43 (6580): Guest Log: Looking for outputfile HITS.47533967._002273.pool.root.1
2025-11-22 22:47:43 (6580): Guest Log: HITS file was successfully produced
2025-11-22 22:47:43 (6580): Guest Log: -rw-------. 1 atlas atlas 917828527 Nov 22 21:46 /home/atlas/RunAtlas/HITS.47533967._002273.pool.root.1
2025-11-22 22:47:46 (6580): Guest Log: Successfully finished the ATLAS job!
2025-11-22 22:47:46 (6580): Guest Log: Copying the results back to the shared directory!
2025-11-22 22:47:46 (6580): Guest Log:  *** Contents of shared directory: ***
2025-11-22 22:47:46 (6580): Guest Log: total 1306240
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root 411612573 Nov 22 09:09 ATLAS.root_0
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root 917828527 Nov 22 21:47 HITS.pool.root.1
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root     12429 Nov 22 09:09 init_data.xml
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root    590105 Nov 22 08:47 input.tar.gz
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root   7516160 Nov 22 21:47 result.tar.gz
2025-11-22 22:47:46 (6580): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 22 08:47 start_atlas.sh
2025-11-22 22:47:46 (6580): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-22 22:47:46 (6580): VM Completion File Detected.
2025-11-22 22:47:46 (6580): Powering off VM.
2025-11-22 22:47:47 (6580): Successfully stopped VM.
2025-11-22 22:47:47 (6580): Deregistering VM. (boinc_75cdf357690eef05, slot#0)
2025-11-22 22:47:47 (6580): Removing network bandwidth throttle group from VM.
2025-11-22 22:47:47 (6580): Removing VM from VirtualBox.
2025-11-22 22:47:52 (6580): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN