Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:26:43 (7133): wrapper (7.7.26015): starting
03:26:43 (7133): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 03:26:43] Arguments: --nthreads 8
[2025-11-22 03:26:43] Threads: 8
[2025-11-22 03:26:43] Checking for CVMFS
[2025-11-22 03:26:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 03:26:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 03:26:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 03:26:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 03:26:44] 2.11.2.0 8539 111713 144948 153165 0 81 13696656 18432001 1765 130560 0 83397640 99.973 4670356 31475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 03:26:44] CVMFS is ok
[2025-11-22 03:26:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 03:26:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 03:26:44] Further information can be found at the LHC@home message board.
[2025-11-22 03:26:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 03:26:44] Checking for apptainer binary...
[2025-11-22 03:26:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 03:26:44] Running /usr/bin/apptainer --version
[2025-11-22 03:26:44] apptainer version 1.3.2-1.el7
[2025-11-22 03:26:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 03:26:45] c-206-1.aglt2.org
[2025-11-22 03:26:45] apptainer works
[2025-11-22 03:26:45] Set ATHENA_PROC_NUMBER=8
[2025-11-22 03:26:45] Set ATHENA_CORE_NUMBER=8
[2025-11-22 03:26:45] Starting ATLAS job with PandaID=6894291404
[2025-11-22 03:26:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:30:14 (17271): wrapper (7.7.26015): starting
08:30:14 (17271): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 08:30:14] Arguments: --nthreads 8
[2025-11-22 08:30:14] Threads: 8
[2025-11-22 08:30:14] This job has been restarted, cleaning up previous attempt
[2025-11-22 08:30:14] Checking for CVMFS
[2025-11-22 08:30:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 08:30:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 08:30:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 08:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 08:30:14] 2.11.2.0 8539 112017 144596 153173 1 56 13738644 18432001 1 130560 0 83746062 99.974 4680969 31472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 08:30:14] CVMFS is ok
[2025-11-22 08:30:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 08:30:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 08:30:14] Further information can be found at the LHC@home message board.
[2025-11-22 08:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 08:30:14] Checking for apptainer binary...
[2025-11-22 08:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 08:30:14] Running /usr/bin/apptainer --version
[2025-11-22 08:30:14] apptainer version 1.3.2-1.el7
[2025-11-22 08:30:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 08:30:16] c-206-1.aglt2.org
[2025-11-22 08:30:16] apptainer works
[2025-11-22 08:30:16] Set ATHENA_PROC_NUMBER=8
[2025-11-22 08:30:16] Set ATHENA_CORE_NUMBER=8
[2025-11-22 08:30:16] Starting ATLAS job with PandaID=6894291404
[2025-11-22 08:30:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 04:13:33]  *** The last 200 lines of the pilot log: ***
[2025-11-23 04:13:33] 2025-11-23 09:12:24,888 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2025-11-23 04:13:33] 2025-11-23 09:12:24,891 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894291404/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 04:13:33] 2025-11-23 09:12:24,892 | INFO     | extracted standard info from prmon json
[2025-11-23 04:13:33] 2025-11-23 09:12:24,892 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 04:13:33] 2025-11-23 09:12:24,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 04:13:33] 2025-11-23 09:12:24,912 | INFO     | fitting pss+swap vs Time
[2025-11-23 04:13:33] 2025-11-23 09:12:24,914 | INFO     | sum of square deviations: 486513378325.51154
[2025-11-23 04:13:33] 2025-11-23 09:12:24,941 | INFO     | sum of deviations: 2409720742365.762
[2025-11-23 04:13:33] 2025-11-23 09:12:24,941 | INFO     | mean x: 1763853666.2598968
[2025-11-23 04:13:33] 2025-11-23 09:12:24,942 | INFO     | mean y: 3194673.3683304647
[2025-11-23 04:13:33] 2025-11-23 09:12:24,942 | INFO     | intersect: -8733244971.3408
[2025-11-23 04:13:33] 2025-11-23 09:12:24,943 | INFO     | chi2: 5.711579992213299
[2025-11-23 04:13:33] 2025-11-23 09:12:24,944 | INFO     | sum of square deviations: 480260311785.1108
[2025-11-23 04:13:33] 2025-11-23 09:12:24,958 | INFO     | monitor loop #5071: job 0:6894291404 is in state 'finished'
[2025-11-23 04:13:33] 2025-11-23 09:12:24,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:13:33] 2025-11-23 09:12:24,972 | INFO     | sum of deviations: 2834055445490.7656
[2025-11-23 04:13:33] 2025-11-23 09:12:24,972 | INFO     | mean x: 1763853513.7631807
[2025-11-23 04:13:33] 2025-11-23 09:12:24,972 | INFO     | mean y: 3205019.769230769
[2025-11-23 04:13:33] 2025-11-23 09:12:24,973 | INFO     | intersect: -10405439069.824558
[2025-11-23 04:13:33] 2025-11-23 09:12:24,974 | INFO     | chi2: 2.630475446880566
[2025-11-23 04:13:33] 2025-11-23 09:12:24,974 | INFO     | current chi2=2.630475446880566 (change=53.94487251396739 %)
[2025-11-23 04:13:33] 2025-11-23 09:12:24,976 | INFO     | sum of square deviations: 474061060207.1866
[2025-11-23 04:13:33] 2025-11-23 09:12:25,021 | INFO     | sum of deviations: 2910851643058.243
[2025-11-23 04:13:33] 2025-11-23 09:12:25,022 | INFO     | mean x: 1763853361.266493
[2025-11-23 04:13:33] 2025-11-23 09:12:25,022 | INFO     | mean y: 3206904.552951389
[2025-11-23 04:13:33] 2025-11-23 09:12:25,022 | INFO     | intersect: -10827287067.07265
[2025-11-23 04:13:33] 2025-11-23 09:12:25,024 | INFO     | chi2: 2.3802977167306576
[2025-11-23 04:13:33] 2025-11-23 09:12:25,024 | INFO     | current chi2=2.3802977167306576 (change=9.510741886855083 %)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,024 | INFO     | right removable region: 1151
[2025-11-23 04:13:33] 2025-11-23 09:12:25,026 | INFO     | sum of square deviations: 480259773155.1108
[2025-11-23 04:13:33] 2025-11-23 09:12:25,071 | INFO     | sum of deviations: 2086339024766.626
[2025-11-23 04:13:33] 2025-11-23 09:12:25,072 | INFO     | mean x: 1763853818.7631807
[2025-11-23 04:13:33] 2025-11-23 09:12:25,072 | INFO     | mean y: 3202549.1227312014
[2025-11-23 04:13:33] 2025-11-23 09:12:25,072 | INFO     | intersect: -7659311077.394818
[2025-11-23 04:13:33] 2025-11-23 09:12:25,074 | INFO     | chi2: 3.66616716005889
[2025-11-23 04:13:33] 2025-11-23 09:12:25,074 | INFO     | current chi2=3.66616716005889 (change=35.811681442664856 %)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,076 | INFO     | sum of square deviations: 474059982947.1867
[2025-11-23 04:13:33] 2025-11-23 09:12:25,120 | INFO     | sum of deviations: 1984354817345.0044
[2025-11-23 04:13:33] 2025-11-23 09:12:25,121 | INFO     | mean x: 1763853971.266493
[2025-11-23 04:13:33] 2025-11-23 09:12:25,121 | INFO     | mean y: 3205057.3289930555
[2025-11-23 04:13:33] 2025-11-23 09:12:25,121 | INFO     | intersect: -7380063412.656412
[2025-11-23 04:13:33] 2025-11-23 09:12:25,123 | INFO     | chi2: 3.5750462882456886
[2025-11-23 04:13:33] 2025-11-23 09:12:25,123 | INFO     | current chi2=3.5750462882456886 (change=2.4854532768150595 %)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,123 | INFO     | left removable region: 20
[2025-11-23 04:13:33] 2025-11-23 09:12:25,125 | INFO     | sum of square deviations: 448605085598.60095
[2025-11-23 04:13:33] 2025-11-23 09:12:25,170 | INFO     | sum of deviations: 2343385572305.424
[2025-11-23 04:13:33] 2025-11-23 09:12:25,170 | INFO     | mean x: 1763853940.7727675
[2025-11-23 04:13:33] 2025-11-23 09:12:25,170 | INFO     | mean y: 3220850.6047745356
[2025-11-23 04:13:33] 2025-11-23 09:12:25,170 | INFO     | intersect: -9210651236.791508
[2025-11-23 04:13:33] 2025-11-23 09:12:25,172 | INFO     | chi2: 0.18055513728244635
[2025-11-23 04:13:33] 2025-11-23 09:12:25,173 | INFO     | current memory leak: 5.22 B/s (using 1131 data points, chi2=0.18)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,174 | INFO     | could have reported an average CPU frequency of 2581 MHz (42 samples)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,174 | INFO     | ..............................
[2025-11-23 04:13:33] 2025-11-23 09:12:25,174 | INFO     | . Timing measurements:
[2025-11-23 04:13:33] 2025-11-23 09:12:25,174 | INFO     | . get job = 0 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . initial setup = 2 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . payload setup = 6 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . stage-in = 0 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . payload execution = 70879 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . stage-out = 3 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,175 | INFO     | . log creation = 0 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,176 | INFO     | ..............................
[2025-11-23 04:13:33] 2025-11-23 09:12:25,208 | INFO     | time since job start (70917s) is within the limit (172800.0s)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,320 | INFO     | 
[2025-11-23 04:13:33] 2025-11-23 09:12:25,320 | INFO     | job summary report
[2025-11-23 04:13:33] 2025-11-23 09:12:25,320 | INFO     | --------------------------------------------------
[2025-11-23 04:13:33] 2025-11-23 09:12:25,320 | INFO     | PanDA job id: 6894291404
[2025-11-23 04:13:33] 2025-11-23 09:12:25,320 | INFO     | task id: 47533967
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | errors: (none)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | pilot state: finished 
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | transexitcode: 0
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | exeerrorcode: 0
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | exeerrordiag: 
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | exitcode: 0
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | exitmsg: OK
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | cpuconsumptiontime: 547756 s
[2025-11-23 04:13:33] 2025-11-23 09:12:25,321 | INFO     | nevents: 1000
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | neventsw: 0
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | pid: 16414
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | pgrp: 16414
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | corecount: 8
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | event service: False
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | sizes: {0: 2298534, 1: 2298733, 5: 2298995, 11: 2299051, 70888: 2355848, 70893: 2364842, 70895: 2365026, 70900: 2365272}
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | --------------------------------------------------
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | 
[2025-11-23 04:13:33] 2025-11-23 09:12:25,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 04:13:33] 2025-11-23 09:12:25,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 04:13:33] 2025-11-23 09:12:25,344 | INFO     | job 6894291404 has completed (purged errors)
[2025-11-23 04:13:33] 2025-11-23 09:12:25,344 | INFO     | overall cleanup function is called
[2025-11-23 04:13:33] 2025-11-23 09:12:26,361 | INFO     | --- collectZombieJob: --- 10, [16414]
[2025-11-23 04:13:33] 2025-11-23 09:12:26,361 | INFO     | zombie collector waiting for pid 16414
[2025-11-23 04:13:33] 2025-11-23 09:12:26,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 04:13:33] 2025-11-23 09:12:26,361 | INFO     | collected zombie processes
[2025-11-23 04:13:33] 2025-11-23 09:12:26,362 | INFO     | will attempt to kill all subprocesses of pid=16414
[2025-11-23 04:13:33] 2025-11-23 09:12:26,492 | INFO     | process IDs to be killed: [16414] (in reverse order)
[2025-11-23 04:13:33] 2025-11-23 09:12:26,548 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 04:13:33] 2025-11-23 09:12:26,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 04:13:33] 2025-11-23 09:12:26,551 | INFO     | did not find any defunct processes belonging to 16414
[2025-11-23 04:13:33] 2025-11-23 09:12:26,555 | INFO     | did not find any defunct processes belonging to 16414
[2025-11-23 04:13:33] 2025-11-23 09:12:26,557 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 04:13:33] 2025-11-23 09:12:26,557 | INFO     | ready for new job
[2025-11-23 04:13:33] 2025-11-23 09:12:26,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 04:13:33] 2025-11-23 09:12:26,562 | INFO     | ***************************************
[2025-11-23 04:13:33] 2025-11-23 09:12:26,562 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 04:13:33] 2025-11-23 09:12:26,562 | INFO     | ***************************************
[2025-11-23 04:13:33] 2025-11-23 09:12:26,562 | INFO     | 
[2025-11-23 04:13:33] 2025-11-23 09:12:26,563 | INFO     | architecture information:
[2025-11-23 04:13:33] 2025-11-23 09:12:26,563 | INFO     | executing command: cat /etc/os-release
[2025-11-23 04:13:33] 2025-11-23 09:12:26,574 | INFO     | cat /etc/os-release:
[2025-11-23 04:13:33] NAME="CentOS Linux"
[2025-11-23 04:13:33] VERSION="7 (Core)"
[2025-11-23 04:13:33] ID="centos"
[2025-11-23 04:13:33] ID_LIKE="rhel fedora"
[2025-11-23 04:13:33] VERSION_ID="7"
[2025-11-23 04:13:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 04:13:33] ANSI_COLOR="0;31"
[2025-11-23 04:13:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 04:13:33] HOME_URL="https://www.centos.org/"
[2025-11-23 04:13:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 04:13:33] 
[2025-11-23 04:13:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 04:13:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 04:13:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 04:13:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 04:13:33] 
[2025-11-23 04:13:33] 2025-11-23 09:12:26,574 | INFO     | ***************************************
[2025-11-23 04:13:33] 2025-11-23 09:12:27,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 04:13:33] 2025-11-23 09:12:27,097 | INFO     | sufficient remaining disk space (26690453504 B)
[2025-11-23 04:13:33] 2025-11-23 09:12:27,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 04:13:33] 2025-11-23 09:12:27,098 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 04:13:33] 2025-11-23 09:12:27,098 | INFO     | update_server=False
[2025-11-23 04:13:33] 2025-11-23 09:12:27,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 04:13:33] 2025-11-23 09:12:27,099 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 04:13:33] 2025-11-23 09:12:27,099 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 04:13:33] 2025-11-23 09:12:27,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 04:13:33] 2025-11-23 09:12:27,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 04:13:33] 2025-11-23 09:12:27,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:13:33] 2025-11-23 09:12:27,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 04:13:33] 2025-11-23 09:12:27,210 | INFO     | all payload control threads have been joined
[2025-11-23 04:13:33] 2025-11-23 09:12:27,472 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 04:13:33] 2025-11-23 09:12:27,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 04:13:33] 2025-11-23 09:12:27,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:13:33] 2025-11-23 09:12:27,473 | INFO     | will abort loop
[2025-11-23 04:13:33] 2025-11-23 09:12:28,106 | INFO     | [job] retrieve thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,107 | INFO     | [job] queue monitor thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,116 | INFO     | all data control threads have been joined
[2025-11-23 04:13:33] 2025-11-23 09:12:28,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,216 | INFO     | [payload] control thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,244 | INFO     | [payload] failed_post thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,308 | INFO     | [job] validate thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,424 | INFO     | [data] copytool_in thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,425 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,478 | INFO     | [job] job monitor thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:28,560 | INFO     | all job control threads have been joined
[2025-11-23 04:13:33] 2025-11-23 09:12:28,854 | INFO     | [payload] validate_post thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:29,107 | INFO     | [data] copytool_out thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:29,121 | INFO     | [data] control thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:29,254 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:29,377 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:29,565 | INFO     | [job] control thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:12:30,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 04:13:33] 2025-11-23 09:12:34,402 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 04:13:33] 2025-11-23 09:13:26,431 | INFO     | [monitor] cgroup control has ended
[2025-11-23 04:13:33] 2025-11-23 09:13:27,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698005112640)>', '<ExcThread(monitor, started 140697323681536)>']
[2025-11-23 04:13:33] 2025-11-23 09:13:28,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 04:13:33] 2025-11-23 09:13:28,409 | INFO     | [monitor] control thread has ended
[2025-11-23 04:13:33] 2025-11-23 09:13:32,739 | INFO     | all workflow threads have been joined
[2025-11-23 04:13:33] 2025-11-23 09:13:32,739 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 04:13:33] 2025-11-23 09:13:32,739 | INFO     | traces error code: 0
[2025-11-23 04:13:33] 2025-11-23 09:13:32,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 04:13:33] 2025-11-23 09:13:32,864 [wrapper] ==== pilot stdout END ====
[2025-11-23 04:13:33] 2025-11-23 09:13:32,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 04:13:33] 2025-11-23 09:13:32,869 [wrapper] pilotpid: 28382
[2025-11-23 04:13:33] 2025-11-23 09:13:32,871 [wrapper] Pilot exit status: 0
[2025-11-23 04:13:33] 2025-11-23 09:13:32,880 [wrapper] pandaids: 6894291404 6894291404
[2025-11-23 04:13:33] 2025-11-23 09:13:32,921 [wrapper] cleanup supervisor_pilot 27957 28383
[2025-11-23 04:13:33] 2025-11-23 09:13:32,923 [wrapper] Test setup, not cleaning
[2025-11-23 04:13:33] 2025-11-23 09:13:32,926 [wrapper] apfmon messages muted
[2025-11-23 04:13:33] 2025-11-23 09:13:32,928 [wrapper] ==== wrapper stdout END ====
[2025-11-23 04:13:33] 2025-11-23 09:13:32,929 [wrapper] ==== wrapper stderr END ====
[2025-11-23 04:13:33]  *** Error codes and diagnostics ***
[2025-11-23 04:13:33]     "exeErrorCode": 0,
[2025-11-23 04:13:33]     "exeErrorDiag": "",
[2025-11-23 04:13:33]     "pilotErrorCode": 0,
[2025-11-23 04:13:33]     "pilotErrorDiag": "",
[2025-11-23 04:13:33]  *** Listing of results directory ***
[2025-11-23 04:13:33] total 1735480
[2025-11-23 04:13:33] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 07:04 pilot3.tar.gz
[2025-11-23 04:13:33] -rwx------ 1 boincer umatlas     36292 Nov 21 07:15 runpilot2-wrapper.sh
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 07:15 queuedata.json
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas       100 Nov 22 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 04:13:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 03:26 run_atlas
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas       105 Nov 22 03:26 job.xml
[2025-11-23 04:13:33] -rw-r--r-- 3 boincer umatlas 410124702 Nov 22 03:26 EVNT.47493127._002442.pool.root.1
[2025-11-23 04:13:33] -rw-r--r-- 3 boincer umatlas 410124702 Nov 22 03:26 ATLAS.root_0
[2025-11-23 04:13:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 03:26 start_atlas.sh
[2025-11-23 04:13:33] drwxrwx--x 2 boincer umatlas      4096 Nov 22 03:26 shared
[2025-11-23 04:13:33] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 03:26 input.tar.gz
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas         0 Nov 22 03:26 boinc_lockfile
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 08:30 pandaJob.out
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas        57 Nov 22 08:30 setup.sh.local
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas    989768 Nov 22 08:30 agis_schedconf.cvmfs.json
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas       533 Nov 23 04:03 boinc_task_state.xml
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas 928637942 Nov 23 04:11 HITS.47533967._004137.pool.root.1
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas        96 Nov 23 04:11 pilot_heartbeat.json
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas      5953 Nov 23 04:12 init_data.xml
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas      1070 Nov 23 04:12 memory_monitor_summary.json
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas   1526164 Nov 23 04:12 agis_ddmendpoints.agis.ALL.json
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas   2335181 Nov 23 04:12 log.47533967._004137.job.log.tgz.1
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas      8647 Nov 23 04:12 heartbeat.json
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 04:13 boinc_mmap_file
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas        29 Nov 23 04:13 wrapper_checkpoint.txt
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas      4738 Nov 23 04:13 pilotlog.txt
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas   9820713 Nov 23 04:13 log.47533967._004137.job.log.1
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas       353 Nov 23 04:13 output.list
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas       620 Nov 23 04:13 runtime_log
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas  12175360 Nov 23 04:13 result.tar.gz
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas      9423 Nov 23 04:13 runtime_log.err
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas       792 Nov 23 04:13 ceaNDmbEfg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIPJKDmYlRKRo.diag
[2025-11-23 04:13:33] -rw-r--r-- 1 boincer umatlas     23404 Nov 23 04:13 stderr.txt
[2025-11-23 04:13:33] HITS file was successfully produced:
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas 928637942 Nov 23 04:11 shared/HITS.pool.root.1
[2025-11-23 04:13:33]  *** Contents of shared directory: ***
[2025-11-23 04:13:33] total 1319884
[2025-11-23 04:13:33] -rw-r--r-- 3 boincer umatlas 410124702 Nov 22 03:26 ATLAS.root_0
[2025-11-23 04:13:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 03:26 start_atlas.sh
[2025-11-23 04:13:33] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 03:26 input.tar.gz
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas 928637942 Nov 23 04:11 HITS.pool.root.1
[2025-11-23 04:13:33] -rw------- 1 boincer umatlas  12175360 Nov 23 04:13 result.tar.gz
04:13:34 (17271): run_atlas exited; CPU time 546811.987224
04:13:34 (17271): called boinc_finish(0)

</stderr_txt>
]]>

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