Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:57:15 (25512): wrapper (7.7.26015): starting
04:57:15 (25512): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:57:15] Arguments: --nthreads 8
[2025-11-25 04:57:15] Threads: 8
[2025-11-25 04:57:15] Checking for CVMFS
[2025-11-25 04:57:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:57:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:57:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:57:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:57:17] 2.11.2.0 30456 283253 141496 153268 3 85 19229333 25165824 4632 130560 11 120143180 99.865 81284479 2754 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 04:57:17] CVMFS is ok
[2025-11-25 04:57:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:57:18] Checking for apptainer binary...
[2025-11-25 04:57:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:57:18] Running /usr/bin/apptainer --version
[2025-11-25 04:57:18] apptainer version 1.3.2-1.el7
[2025-11-25 04:57:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:57:50] cg-vwn385.simple-grid.lan
[2025-11-25 04:57:50] apptainer works
[2025-11-25 04:57:50] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:57:50] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:57:50] Starting ATLAS job with PandaID=6894262104
[2025-11-25 04:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:32:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:32:31] 2025-11-26 05:31:39,900 | INFO     | time since job start (91797s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:39,955 | INFO     | monitor loop #6168: job 0:6894262104 is in state 'finished'
[2025-11-26 06:32:31] 2025-11-26 05:31:39,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:32:31] 2025-11-26 05:31:41,908 | INFO     | time since job start (91799s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:42,460 | INFO     | monitor loop #6169: job 0:6894262104 is in state 'finished'
[2025-11-26 06:32:31] 2025-11-26 05:31:42,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:32:31] 2025-11-26 05:31:43,915 | INFO     | time since job start (91801s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:44,967 | INFO     | monitor loop #6170: job 0:6894262104 is in state 'finished'
[2025-11-26 06:32:31] 2025-11-26 05:31:44,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:32:31] 2025-11-26 05:31:45,922 | INFO     | time since job start (91803s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:47,472 | INFO     | monitor loop #6171: job 0:6894262104 is in state 'finished'
[2025-11-26 06:32:31] 2025-11-26 05:31:47,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:32:31] 2025-11-26 05:31:47,936 | INFO     | time since job start (91805s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:49,691 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 06:32:31] 2025-11-26 05:31:49,692 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 06:32:31] 2025-11-26 05:31:49,694 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6894262104/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:32:31] 2025-11-26 05:31:49,695 | INFO     | extracted standard info from prmon json
[2025-11-26 06:32:31] 2025-11-26 05:31:49,695 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:32:31] 2025-11-26 05:31:49,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:32:31] 2025-11-26 05:31:49,725 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:32:31] 2025-11-26 05:31:49,728 | INFO     | sum of square deviations: 1036099185132.8585
[2025-11-26 06:32:31] 2025-11-26 05:31:49,800 | INFO     | sum of deviations: 3419117236115.4355
[2025-11-26 06:32:31] 2025-11-26 05:31:49,800 | INFO     | mean x: 1764089433.2428093
[2025-11-26 06:32:31] 2025-11-26 05:31:49,800 | INFO     | mean y: 2836725.1806020066
[2025-11-26 06:32:31] 2025-11-26 05:31:49,800 | INFO     | intersect: -5818641250.864873
[2025-11-26 06:32:31] 2025-11-26 05:31:49,803 | INFO     | chi2: 25.887727374748327
[2025-11-26 06:32:31] 2025-11-26 05:31:49,807 | INFO     | sum of square deviations: 1025738822667.6113
[2025-11-26 06:32:31] 2025-11-26 05:31:49,902 | INFO     | sum of deviations: 3938093020822.14
[2025-11-26 06:32:31] 2025-11-26 05:31:49,903 | INFO     | mean x: 1764089280.74698
[2025-11-26 06:32:31] 2025-11-26 05:31:49,903 | INFO     | mean y: 2844361.973825503
[2025-11-26 06:32:31] 2025-11-26 05:31:49,904 | INFO     | intersect: -6769978827.607291
[2025-11-26 06:32:31] 2025-11-26 05:31:49,906 | INFO     | chi2: 22.311720708944826
[2025-11-26 06:32:31] 2025-11-26 05:31:49,907 | INFO     | current chi2=22.311720708944826 (change=13.813521032717787 %)
[2025-11-26 06:32:31] 2025-11-26 05:31:49,907 | INFO     | right removable region: 1489
[2025-11-26 06:32:31] 2025-11-26 05:31:49,910 | INFO     | sum of square deviations: 1025737689287.6116
[2025-11-26 06:32:31] 2025-11-26 05:31:49,967 | INFO     | time since job start (91807s) is within the limit (172800.0s)
[2025-11-26 06:32:31] 2025-11-26 05:31:49,980 | INFO     | monitor loop #6172: job 0:6894262104 is in state 'finished'
[2025-11-26 06:32:31] 2025-11-26 05:31:49,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,009 | INFO     | sum of deviations: 2802891167604.683
[2025-11-26 06:32:31] 2025-11-26 05:31:50,010 | INFO     | mean x: 1764089585.74698
[2025-11-26 06:32:31] 2025-11-26 05:31:50,010 | INFO     | mean y: 2845794.1503355703
[2025-11-26 06:32:31] 2025-11-26 05:31:50,010 | INFO     | intersect: -4817637230.303676
[2025-11-26 06:32:31] 2025-11-26 05:31:50,012 | INFO     | chi2: 21.337592721309598
[2025-11-26 06:32:31] 2025-11-26 05:31:50,012 | INFO     | current chi2=21.337592721309598 (change=17.576415988825143 %)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,012 | INFO     | left removable region: 10
[2025-11-26 06:32:31] 2025-11-26 05:31:50,014 | INFO     | sum of square deviations: 1003187379795.8813
[2025-11-26 06:32:31] 2025-11-26 05:31:50,102 | INFO     | sum of deviations: 2909644525952.848
[2025-11-26 06:32:31] 2025-11-26 05:31:50,102 | INFO     | mean x: 1764089555.2562542
[2025-11-26 06:32:31] 2025-11-26 05:31:50,102 | INFO     | mean y: 2862674.0162271806
[2025-11-26 06:32:31] 2025-11-26 05:31:50,102 | INFO     | intersect: -5113702407.560398
[2025-11-26 06:32:31] 2025-11-26 05:31:50,104 | INFO     | chi2: 13.96838468817469
[2025-11-26 06:32:31] 2025-11-26 05:31:50,104 | INFO     | current memory leak: 2.90 B/s (using 1479 data points, chi2=13.97)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,106 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,106 | INFO     | ..............................
[2025-11-26 06:32:31] 2025-11-26 05:31:50,106 | INFO     | . Timing measurements:
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . get job = 0 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . initial setup = 7 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . payload setup = 193 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . stage-in = 0 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . payload execution = 91300 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . stage-out = 5 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | . log creation = 1 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,107 | INFO     | ..............................
[2025-11-26 06:32:31] 2025-11-26 05:31:50,299 | INFO     | 
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | job summary report
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | --------------------------------------------------
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | PanDA job id: 6894262104
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | task id: 47533967
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | errors: (none)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | pilot state: finished 
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | transexitcode: 0
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | exeerrorcode: 0
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | exeerrordiag: 
[2025-11-26 06:32:31] 2025-11-26 05:31:50,300 | INFO     | exitcode: 0
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | exitmsg: OK
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | cpuconsumptiontime: 342960 s
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | nevents: 1000
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | neventsw: 0
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | pid: 3472
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | pgrp: 3472
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | corecount: 8
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | event service: False
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | sizes: {0: 2283475, 1: 2284161, 2: 2284360, 13: 2284360, 24: 2284416, 34: 2284444, 45: 2284600, 56: 2284628, 66: 2284656, 77: 2284684, 88: 2284740, 99: 2285048, 10
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | --------------------------------------------------
[2025-11-26 06:32:31] 2025-11-26 05:31:50,301 | INFO     | 
[2025-11-26 06:32:31] 2025-11-26 05:31:50,302 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-26 06:32:31] 2025-11-26 05:31:50,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:32:31] 2025-11-26 05:31:50,623 | INFO     | job 6894262104 has completed (purged errors)
[2025-11-26 06:32:31] 2025-11-26 05:31:50,624 | INFO     | overall cleanup function is called
[2025-11-26 06:32:31] 2025-11-26 05:31:51,641 | INFO     | --- collectZombieJob: --- 10, [3472]
[2025-11-26 06:32:31] 2025-11-26 05:31:51,642 | INFO     | zombie collector waiting for pid 3472
[2025-11-26 06:32:31] 2025-11-26 05:31:51,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:32:31] 2025-11-26 05:31:51,642 | INFO     | collected zombie processes
[2025-11-26 06:32:31] 2025-11-26 05:31:51,642 | INFO     | will attempt to kill all subprocesses of pid=3472
[2025-11-26 06:32:31] 2025-11-26 05:31:51,758 | INFO     | process IDs to be killed: [3472] (in reverse order)
[2025-11-26 06:32:31] 2025-11-26 05:31:51,865 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:32:31] 2025-11-26 05:31:51,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:32:31] 2025-11-26 05:31:51,869 | INFO     | did not find any defunct processes belonging to 3472
[2025-11-26 06:32:31] 2025-11-26 05:31:51,871 | INFO     | did not find any defunct processes belonging to 3472
[2025-11-26 06:32:31] 2025-11-26 05:31:51,897 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:32:31] 2025-11-26 05:31:51,897 | INFO     | ready for new job
[2025-11-26 06:32:31] 2025-11-26 05:31:51,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:32:31] 2025-11-26 05:31:51,902 | INFO     | ***************************************
[2025-11-26 06:32:31] 2025-11-26 05:31:51,903 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:32:31] 2025-11-26 05:31:51,903 | INFO     | ***************************************
[2025-11-26 06:32:31] 2025-11-26 05:31:51,903 | INFO     | 
[2025-11-26 06:32:31] 2025-11-26 05:31:51,903 | INFO     | pilot is running in a VM
[2025-11-26 06:32:31] 2025-11-26 05:31:51,904 | INFO     | architecture information:
[2025-11-26 06:32:31] 2025-11-26 05:31:51,912 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:32:31] 2025-11-26 05:31:52,049 | INFO     | cat /etc/os-release:
[2025-11-26 06:32:31] NAME="CentOS Linux"
[2025-11-26 06:32:31] VERSION="7 (Core)"
[2025-11-26 06:32:31] ID="centos"
[2025-11-26 06:32:31] ID_LIKE="rhel fedora"
[2025-11-26 06:32:31] VERSION_ID="7"
[2025-11-26 06:32:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:32:31] ANSI_COLOR="0;31"
[2025-11-26 06:32:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:32:31] HOME_URL="https://www.centos.org/"
[2025-11-26 06:32:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:32:31] 
[2025-11-26 06:32:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:32:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:32:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:32:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:32:31] 
[2025-11-26 06:32:31] 2025-11-26 05:31:52,050 | INFO     | ***************************************
[2025-11-26 06:32:31] 2025-11-26 05:31:52,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-26 06:32:31] 2025-11-26 05:31:52,618 | INFO     | sufficient remaining disk space (494838743040 B)
[2025-11-26 06:32:31] 2025-11-26 05:31:52,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:32:31] 2025-11-26 05:31:52,619 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:32:31] 2025-11-26 05:31:52,619 | INFO     | update_server=False
[2025-11-26 06:32:31] 2025-11-26 05:31:52,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:32:31] 2025-11-26 05:31:52,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:32:31] 2025-11-26 05:31:53,090 | INFO     | all data control threads have been joined
[2025-11-26 06:32:31] 2025-11-26 05:31:53,166 | INFO     | all job control threads have been joined
[2025-11-26 06:32:31] 2025-11-26 05:31:53,484 | INFO     | all payload control threads have been joined
[2025-11-26 06:32:31] 2025-11-26 05:31:53,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:32:31] 2025-11-26 05:31:53,491 | INFO     | aborting loop
[2025-11-26 06:32:31] 2025-11-26 05:31:53,624 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:53,652 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:53,781 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:53,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:32:31] 2025-11-26 05:31:54,051 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,097 | INFO     | [data] control thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,172 | INFO     | [job] control thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,490 | INFO     | [payload] control thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,496 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,577 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,622 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,703 | INFO     | [job] validate thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:54,755 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:55,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:32:31] 2025-11-26 05:31:55,833 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:56,253 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:31:56,710 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:32:31] 2025-11-26 05:32:21,624 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:32:31] 2025-11-26 05:32:22,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608400267072)>', '<ExcThread(monitor, started 140607825635072)>']
[2025-11-26 06:32:31] 2025-11-26 05:32:23,182 | INFO     | PID=29316 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:32:31] 2025-11-26 05:32:23,183 | INFO     | .. there are 9 such processes running
[2025-11-26 06:32:31] 2025-11-26 05:32:23,184 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:32:31] 2025-11-26 05:32:23,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:32:31] 2025-11-26 05:32:23,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:32:31] 2025-11-26 05:32:23,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:32:31] 2025-11-26 05:32:23,184 | INFO     | [monitor] control thread has ended
[2025-11-26 06:32:31] 2025-11-26 05:32:27,762 | INFO     | all workflow threads have been joined
[2025-11-26 06:32:31] 2025-11-26 05:32:27,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:32:31] 2025-11-26 05:32:27,763 | INFO     | traces error code: 0
[2025-11-26 06:32:31] 2025-11-26 05:32:27,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:32:31] 2025-11-26 05:32:27,928 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:32:31] 2025-11-26 05:32:27,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:32:31] 2025-11-26 05:32:27,942 [wrapper] pilotpid: 29316
[2025-11-26 06:32:31] 2025-11-26 05:32:27,950 [wrapper] Pilot exit status: 0
[2025-11-26 06:32:31] 2025-11-26 05:32:28,219 [wrapper] pandaids: 6894262104
[2025-11-26 06:32:31] 2025-11-26 05:32:29,194 [wrapper] cleanup supervisor_pilot  9748 29317
[2025-11-26 06:32:31] 2025-11-26 05:32:29,262 [wrapper] Test setup, not cleaning
[2025-11-26 06:32:31] 2025-11-26 05:32:29,380 [wrapper] apfmon messages muted
[2025-11-26 06:32:31] 2025-11-26 05:32:29,490 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:32:31] 2025-11-26 05:32:29,593 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:32:31]  *** Error codes and diagnostics ***
[2025-11-26 06:32:31]     "exeErrorCode": 0,
[2025-11-26 06:32:31]     "exeErrorDiag": "",
[2025-11-26 06:32:31]     "pilotErrorCode": 0,
[2025-11-26 06:32:31]     "pilotErrorDiag": "",
[2025-11-26 06:32:31]  *** Listing of results directory ***
[2025-11-26 06:32:31] total 1344124
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc      5112 Nov 21 05:43 queuedata.json
[2025-11-26 06:32:31] -rwx------. 1 boinc boinc     36292 Nov 21 05:44 runpilot2-wrapper.sh
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc       100 Nov 25 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:32:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 04:57 run_atlas
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc       105 Nov 25 04:57 job.xml
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc      6393 Nov 25 04:57 init_data.xml
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc 411938578 Nov 25 04:57 EVNT.47493127._002198.pool.root.1
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc     15847 Nov 25 04:57 start_atlas.sh
[2025-11-26 06:32:31] drwxrwx--x. 2 boinc boinc        68 Nov 25 04:57 shared
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc    590105 Nov 25 04:57 input.tar.gz
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc         0 Nov 25 04:57 boinc_lockfile
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc      2782 Nov 25 04:57 pandaJob.out
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc    991801 Nov 25 05:01 agis_schedconf.cvmfs.json
[2025-11-26 06:32:31] drwx------. 5 boinc boinc      4096 Nov 25 05:01 pilot3
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc       533 Nov 26 06:05 boinc_task_state.xml
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc 930971852 Nov 26 06:28 HITS.47533967._001691.pool.root.1
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc      1028 Nov 26 06:29 memory_monitor_summary.json
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc   1516240 Nov 26 06:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc   2557571 Nov 26 06:30 log.47533967._001691.job.log.tgz.1
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc      8627 Nov 26 06:31 heartbeat.json
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc        95 Nov 26 06:32 pilot_heartbeat.json
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc        29 Nov 26 06:32 wrapper_checkpoint.txt
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc      8192 Nov 26 06:32 boinc_mmap_file
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc      4885 Nov 26 06:32 pilotlog.txt
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc  12225274 Nov 26 06:32 log.47533967._001691.job.log.1
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc       353 Nov 26 06:32 output.list
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc       620 Nov 26 06:32 runtime_log
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc  14807040 Nov 26 06:32 result.tar.gz
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc      8833 Nov 26 06:32 runtime_log.err
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc       662 Nov 26 06:32 7iHMDmWBYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO2IKDmlNSnWn.diag
[2025-11-26 06:32:31] -rw-r--r--. 1 boinc boinc     21440 Nov 26 06:32 stderr.txt
[2025-11-26 06:32:31] HITS file was successfully produced:
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc 930971852 Nov 26 06:28 shared/HITS.pool.root.1
[2025-11-26 06:32:31]  *** Contents of shared directory: ***
[2025-11-26 06:32:31] total 1326496
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc 411938578 Nov 25 04:57 ATLAS.root_0
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc     15847 Nov 25 04:57 start_atlas.sh
[2025-11-26 06:32:31] -rw-r--r--. 2 boinc boinc    590105 Nov 25 04:57 input.tar.gz
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc 930971852 Nov 26 06:28 HITS.pool.root.1
[2025-11-26 06:32:31] -rw-------. 1 boinc boinc  14807040 Nov 26 06:32 result.tar.gz
06:32:32 (25512): run_atlas exited; CPU time 343548.089207
06:32:32 (25512): called boinc_finish(0)

</stderr_txt>
]]>

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