Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:01:10 (32688): wrapper (7.7.26015): starting
00:01:10 (32688): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:01:10] Arguments: --nthreads 8
[2025-11-25 00:01:10] Threads: 8
[2025-11-25 00:01:10] Checking for CVMFS
[2025-11-25 00:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:12] 2.11.2.0 21664 169928 140864 153261 1 85 14065364 25165824 4632 130560 10 56834814 99.881 31137647 2338 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 00:01:12] CVMFS is ok
[2025-11-25 00:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:12] Checking for apptainer binary...
[2025-11-25 00:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:12] Running /usr/bin/apptainer --version
[2025-11-25 00:01:12] apptainer version 1.3.2-1.el7
[2025-11-25 00:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:15] cg-vwn258.simple-grid.lan
[2025-11-25 00:01:15] apptainer works
[2025-11-25 00:01:15] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:01:15] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:01:15] Starting ATLAS job with PandaID=6894290965
[2025-11-25 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:49:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:49:56] 2025-11-26 00:49:13,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:49:56] 2025-11-26 00:49:13,902 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:49:56] 2025-11-26 00:49:13,905 | INFO     | sum of square deviations: 1065486087665.102
[2025-11-26 01:49:56] 2025-11-26 00:49:13,967 | INFO     | sum of deviations: 5341672590948.354
[2025-11-26 01:49:56] 2025-11-26 00:49:13,968 | INFO     | mean x: 1764072015.27833
[2025-11-26 01:49:56] 2025-11-26 00:49:13,968 | INFO     | mean y: 2863026.827700464
[2025-11-26 01:49:56] 2025-11-26 00:49:13,968 | INFO     | intersect: -8841077069.209574
[2025-11-26 01:49:56] 2025-11-26 00:49:13,970 | INFO     | chi2: 19.100297869723672
[2025-11-26 01:49:56] 2025-11-26 00:49:13,972 | INFO     | sum of square deviations: 1054930459471.903
[2025-11-26 01:49:56] 2025-11-26 00:49:14,040 | INFO     | sum of deviations: 5839746760648.977
[2025-11-26 01:49:56] 2025-11-26 00:49:14,041 | INFO     | mean x: 1764071862.78258
[2025-11-26 01:49:56] 2025-11-26 00:49:14,041 | INFO     | mean y: 2870221.5718085105
[2025-11-26 01:49:56] 2025-11-26 00:49:14,041 | INFO     | intersect: -9762449239.763693
[2025-11-26 01:49:56] 2025-11-26 00:49:14,043 | INFO     | chi2: 16.106503130906333
[2025-11-26 01:49:56] 2025-11-26 00:49:14,043 | INFO     | current chi2=16.106503130906333 (change=15.674073562815337 %)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,043 | INFO     | right removable region: 1503
[2025-11-26 01:49:56] 2025-11-26 00:49:14,045 | INFO     | sum of square deviations: 1054929282781.9033
[2025-11-26 01:49:56] 2025-11-26 00:49:14,112 | INFO     | sum of deviations: 4690483199898.996
[2025-11-26 01:49:56] 2025-11-26 00:49:14,112 | INFO     | mean x: 1764072167.78258
[2025-11-26 01:49:56] 2025-11-26 00:49:14,113 | INFO     | mean y: 2872433.724734043
[2025-11-26 01:49:56] 2025-11-26 00:49:14,113 | INFO     | intersect: -7840639924.348881
[2025-11-26 01:49:56] 2025-11-26 00:49:14,115 | INFO     | chi2: 14.028852315896897
[2025-11-26 01:49:56] 2025-11-26 00:49:14,115 | INFO     | current chi2=14.028852315896897 (change=26.551656882093145 %)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,117 | INFO     | sum of square deviations: 1044442432698.6501
[2025-11-26 01:49:56] 2025-11-26 00:49:14,183 | INFO     | sum of deviations: 4092995395064.2866
[2025-11-26 01:49:56] 2025-11-26 00:49:14,183 | INFO     | mean x: 1764072320.2868578
[2025-11-26 01:49:56] 2025-11-26 00:49:14,183 | INFO     | mean y: 2881122.334222815
[2025-11-26 01:49:56] 2025-11-26 00:49:14,183 | INFO     | intersect: -6910223571.084284
[2025-11-26 01:49:56] 2025-11-26 00:49:14,185 | INFO     | chi2: 9.889182727876028
[2025-11-26 01:49:56] 2025-11-26 00:49:14,185 | INFO     | current chi2=9.889182727876028 (change=29.508255520873732 %)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,188 | INFO     | sum of square deviations: 1034025304852.8425
[2025-11-26 01:49:56] 2025-11-26 00:49:14,263 | INFO     | sum of deviations: 3552658500114.513
[2025-11-26 01:49:56] 2025-11-26 00:49:14,263 | INFO     | mean x: 1764072472.7911646
[2025-11-26 01:49:56] 2025-11-26 00:49:14,264 | INFO     | mean y: 2889032.235609103
[2025-11-26 01:49:56] 2025-11-26 00:49:14,264 | INFO     | intersect: -6058033302.901507
[2025-11-26 01:49:56] 2025-11-26 00:49:14,266 | INFO     | chi2: 6.587725304976706
[2025-11-26 01:49:56] 2025-11-26 00:49:14,266 | INFO     | current chi2=6.587725304976706 (change=33.384532511397936 %)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,268 | INFO     | sum of square deviations: 1023677757573.5702
[2025-11-26 01:49:56] 2025-11-26 00:49:14,328 | INFO     | sum of deviations: 3194162114719.687
[2025-11-26 01:49:56] 2025-11-26 00:49:14,329 | INFO     | mean x: 1764072625.2948287
[2025-11-26 01:49:56] 2025-11-26 00:49:14,329 | INFO     | mean y: 2894312.296843519
[2025-11-26 01:49:56] 2025-11-26 00:49:14,329 | INFO     | intersect: -5501507737.706553
[2025-11-26 01:49:56] 2025-11-26 00:49:14,331 | INFO     | chi2: 5.035757908999532
[2025-11-26 01:49:56] 2025-11-26 00:49:14,331 | INFO     | current chi2=5.035757908999532 (change=23.558471613938398 %)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,331 | INFO     | left removable region: 40
[2025-11-26 01:49:56] 2025-11-26 00:49:14,333 | INFO     | sum of square deviations: 970984800756.0682
[2025-11-26 01:49:56] 2025-11-26 00:49:14,402 | INFO     | sum of deviations: 3500718715586.764
[2025-11-26 01:49:56] 2025-11-26 00:49:14,402 | INFO     | mean x: 1764073052.3014355
[2025-11-26 01:49:56] 2025-11-26 00:49:14,403 | INFO     | mean y: 2908139.10936432
[2025-11-26 01:49:56] 2025-11-26 00:49:14,403 | INFO     | intersect: -6357153877.356046
[2025-11-26 01:49:56] 2025-11-26 00:49:14,405 | INFO     | chi2: 1.022956484236796
[2025-11-26 01:49:56] 2025-11-26 00:49:14,405 | INFO     | current memory leak: 3.61 B/s (using 1463 data points, chi2=1.02)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,406 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | ..............................
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . Timing measurements:
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . get job = 0 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . initial setup = 11 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . payload setup = 145 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . stage-in = 0 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . payload execution = 92188 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . stage-out = 8 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | . log creation = 1 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,407 | INFO     | ..............................
[2025-11-26 01:49:56] 2025-11-26 00:49:14,863 | INFO     | 
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | job summary report
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | --------------------------------------------------
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | PanDA job id: 6894290965
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | task id: 47533967
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | errors: (none)
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | pilot state: finished 
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | transexitcode: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | exeerrorcode: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:14,864 | INFO     | exeerrordiag: 
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | exitcode: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | exitmsg: OK
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | cpuconsumptiontime: 346938 s
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | nevents: 1000
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | neventsw: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | pid: 10601
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | pgrp: 10601
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | corecount: 8
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | event service: False
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | sizes: {0: 2283431, 1: 2284116, 2: 2284315, 13: 2284315, 23: 2284371, 34: 2284399, 45: 2284555, 56: 2284583, 67: 2284611, 77: 2284639, 88: 2284695, 96: 2285265, 99
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | --------------------------------------------------
[2025-11-26 01:49:56] 2025-11-26 00:49:14,865 | INFO     | 
[2025-11-26 01:49:56] 2025-11-26 00:49:14,866 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-26 01:49:56] 2025-11-26 00:49:15,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | job 6894290965 has completed (purged errors)
[2025-11-26 01:49:56] 2025-11-26 00:49:15,297 | INFO     | overall cleanup function is called
[2025-11-26 01:49:56] 2025-11-26 00:49:16,319 | INFO     | --- collectZombieJob: --- 10, [10601]
[2025-11-26 01:49:56] 2025-11-26 00:49:16,320 | INFO     | zombie collector waiting for pid 10601
[2025-11-26 01:49:56] 2025-11-26 00:49:16,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:49:56] 2025-11-26 00:49:16,320 | INFO     | collected zombie processes
[2025-11-26 01:49:56] 2025-11-26 00:49:16,320 | INFO     | will attempt to kill all subprocesses of pid=10601
[2025-11-26 01:49:56] 2025-11-26 00:49:16,452 | INFO     | process IDs to be killed: [10601] (in reverse order)
[2025-11-26 01:49:56] 2025-11-26 00:49:17,654 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:49:56] 2025-11-26 00:49:17,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:49:56] 2025-11-26 00:49:17,657 | INFO     | did not find any defunct processes belonging to 10601
[2025-11-26 01:49:56] 2025-11-26 00:49:17,660 | INFO     | did not find any defunct processes belonging to 10601
[2025-11-26 01:49:56] 2025-11-26 00:49:17,723 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:49:56] 2025-11-26 00:49:17,723 | INFO     | ready for new job
[2025-11-26 01:49:56] 2025-11-26 00:49:17,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:49:56] 2025-11-26 00:49:17,729 | INFO     | ***************************************
[2025-11-26 01:49:56] 2025-11-26 00:49:17,729 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:49:56] 2025-11-26 00:49:17,729 | INFO     | ***************************************
[2025-11-26 01:49:56] 2025-11-26 00:49:17,729 | INFO     | 
[2025-11-26 01:49:56] 2025-11-26 00:49:17,730 | INFO     | pilot is running in a VM
[2025-11-26 01:49:56] 2025-11-26 00:49:17,730 | INFO     | architecture information:
[2025-11-26 01:49:56] 2025-11-26 00:49:17,734 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:49:56] 2025-11-26 00:49:18,028 | INFO     | cat /etc/os-release:
[2025-11-26 01:49:56] NAME="CentOS Linux"
[2025-11-26 01:49:56] VERSION="7 (Core)"
[2025-11-26 01:49:56] ID="centos"
[2025-11-26 01:49:56] ID_LIKE="rhel fedora"
[2025-11-26 01:49:56] VERSION_ID="7"
[2025-11-26 01:49:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:49:56] ANSI_COLOR="0;31"
[2025-11-26 01:49:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:49:56] HOME_URL="https://www.centos.org/"
[2025-11-26 01:49:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:49:56] 
[2025-11-26 01:49:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:49:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:49:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:49:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:49:56] 
[2025-11-26 01:49:56] 2025-11-26 00:49:18,028 | INFO     | ***************************************
[2025-11-26 01:49:56] 2025-11-26 00:49:18,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-26 01:49:56] 2025-11-26 00:49:18,825 | INFO     | sufficient remaining disk space (495184773120 B)
[2025-11-26 01:49:56] 2025-11-26 00:49:18,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:49:56] 2025-11-26 00:49:18,825 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:49:56] 2025-11-26 00:49:18,826 | INFO     | update_server=False
[2025-11-26 01:49:56] 2025-11-26 00:49:18,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:49:56] 2025-11-26 00:49:18,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:49:56] 2025-11-26 00:49:19,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:49:56] 2025-11-26 00:49:19,227 | INFO     | aborting loop
[2025-11-26 01:49:56] 2025-11-26 00:49:19,317 | INFO     | all payload control threads have been joined
[2025-11-26 01:49:56] 2025-11-26 00:49:19,388 | INFO     | all data control threads have been joined
[2025-11-26 01:49:56] 2025-11-26 00:49:19,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:49:56] 2025-11-26 00:49:19,831 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,001 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,019 | INFO     | [job] validate thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:49:56] 2025-11-26 00:49:20,164 | INFO     | all job control threads have been joined
[2025-11-26 01:49:56] 2025-11-26 00:49:20,232 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,305 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,323 | INFO     | [payload] control thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,394 | INFO     | [data] control thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,434 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,497 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,535 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,551 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:20,677 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:21,170 | INFO     | [job] control thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:21,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:22,051 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:22,836 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:49:56] 2025-11-26 00:49:46,622 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:49:56] 2025-11-26 00:49:46,712 | INFO     | PID=4060 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 01:49:56] 2025-11-26 00:49:46,712 | INFO     | .. there are 9 such processes running
[2025-11-26 01:49:56] 2025-11-26 00:49:46,714 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:49:56] 2025-11-26 00:49:46,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:49:56] 2025-11-26 00:49:46,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:49:56] 2025-11-26 00:49:47,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753716414272)>', '<ExcThread(monitor, started 139753051641600)>']
[2025-11-26 01:49:56] 2025-11-26 00:49:47,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:49:56] 2025-11-26 00:49:47,720 | INFO     | [monitor] control thread has ended
[2025-11-26 01:49:56] 2025-11-26 00:49:52,041 | INFO     | all workflow threads have been joined
[2025-11-26 01:49:56] 2025-11-26 00:49:52,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:49:56] 2025-11-26 00:49:52,042 | INFO     | traces error code: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:52,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:49:56] 2025-11-26 00:49:52,309 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:49:56] 2025-11-26 00:49:52,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:49:56] 2025-11-26 00:49:52,504 [wrapper] pilotpid: 4060
[2025-11-26 01:49:56] 2025-11-26 00:49:52,583 [wrapper] Pilot exit status: 0
[2025-11-26 01:49:56] 2025-11-26 00:49:52,960 [wrapper] pandaids: 6894290965
[2025-11-26 01:49:56] 2025-11-26 00:49:53,818 [wrapper] cleanup supervisor_pilot 18894 4061
[2025-11-26 01:49:56] 2025-11-26 00:49:53,920 [wrapper] Test setup, not cleaning
[2025-11-26 01:49:56] 2025-11-26 00:49:53,990 [wrapper] apfmon messages muted
[2025-11-26 01:49:56] 2025-11-26 00:49:54,059 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:49:56] 2025-11-26 00:49:54,144 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:49:56]  *** Error codes and diagnostics ***
[2025-11-26 01:49:56]     "exeErrorCode": 0,
[2025-11-26 01:49:56]     "exeErrorDiag": "",
[2025-11-26 01:49:56]     "pilotErrorCode": 0,
[2025-11-26 01:49:56]     "pilotErrorDiag": "",
[2025-11-26 01:49:56]  *** Listing of results directory ***
[2025-11-26 01:49:56] total 1346216
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc    576529 Nov 21 13:04 pilot3.tar.gz
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc      5112 Nov 21 13:05 queuedata.json
[2025-11-26 01:49:56] -rwx------. 1 boinc boinc     36292 Nov 21 13:06 runpilot2-wrapper.sh
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:49:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:01 run_atlas
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:01 job.xml
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc      6390 Nov 25 00:01 init_data.xml
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc 410011199 Nov 25 00:01 EVNT.47493127._002437.pool.root.1
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 01:49:56] drwxrwx--x. 2 boinc boinc        68 Nov 25 00:01 shared
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc    590102 Nov 25 00:01 input.tar.gz
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:01 boinc_lockfile
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc      2785 Nov 25 00:01 pandaJob.out
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-26 01:49:56] drwx------. 5 boinc boinc      4096 Nov 25 00:05 pilot3
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc       533 Nov 26 01:35 boinc_task_state.xml
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc 934795823 Nov 26 01:46 HITS.47533967._004082.pool.root.1
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc      1031 Nov 26 01:47 memory_monitor_summary.json
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc   1516240 Nov 26 01:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc   2569710 Nov 26 01:47 log.47533967._004082.job.log.tgz.1
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc      7944 Nov 26 01:49 heartbeat.json
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc      8192 Nov 26 01:49 boinc_mmap_file
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc        29 Nov 26 01:49 wrapper_checkpoint.txt
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc        95 Nov 26 01:49 pilot_heartbeat.json
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc      4883 Nov 26 01:49 pilotlog.txt
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc  12336477 Nov 26 01:49 log.47533967._004082.job.log.1
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc       353 Nov 26 01:49 output.list
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc       620 Nov 26 01:49 runtime_log
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc  14929920 Nov 26 01:49 result.tar.gz
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc      8817 Nov 26 01:49 runtime_log.err
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc       662 Nov 26 01:49 IikLDmY5eg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4aHKDmUOcBZn.diag
[2025-11-26 01:49:56] -rw-r--r--. 1 boinc boinc     20819 Nov 26 01:49 stderr.txt
[2025-11-26 01:49:56] HITS file was successfully produced:
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc 934795823 Nov 26 01:46 shared/HITS.pool.root.1
[2025-11-26 01:49:56]  *** Contents of shared directory: ***
[2025-11-26 01:49:56] total 1328468
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc 410011199 Nov 25 00:01 ATLAS.root_0
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 01:49:56] -rw-r--r--. 2 boinc boinc    590102 Nov 25 00:01 input.tar.gz
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc 934795823 Nov 26 01:46 HITS.pool.root.1
[2025-11-26 01:49:56] -rw-------. 1 boinc boinc  14929920 Nov 26 01:49 result.tar.gz
01:49:58 (32688): run_atlas exited; CPU time 347497.697177
01:49:58 (32688): called boinc_finish(0)

</stderr_txt>
]]>

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