Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:21 (22445): wrapper (7.7.26015): starting
23:30:21 (22445): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:30:21] Arguments: --nthreads 8
[2025-11-24 23:30:21] Threads: 8
[2025-11-24 23:30:21] Checking for CVMFS
[2025-11-24 23:30:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:30:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:30:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:30:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:30:24] 2.11.2.0 23903 81070 135628 153261 0 84 25083723 25165824 1027 130560 246 24159846 99.865 16338155 1667 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 23:30:24] CVMFS is ok
[2025-11-24 23:30:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:30:24] Checking for apptainer binary...
[2025-11-24 23:30:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:30:24] Running /usr/bin/apptainer --version
[2025-11-24 23:30:24] apptainer version 1.3.2-1.el7
[2025-11-24 23:30:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:31:03] cg-vwn444.simple-grid.lan
[2025-11-24 23:31:03] apptainer works
[2025-11-24 23:31:03] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:31:03] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:31:04] Starting ATLAS job with PandaID=6894264799
[2025-11-24 23:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:09:09]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:09:09] 2025-11-25 23:07:57,623 | INFO     | time since job start (88350s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:07:58,781 | INFO     | monitor loop #5951: job 0:6894264799 is in state 'finished'
[2025-11-26 00:09:09] 2025-11-25 23:07:58,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:09:09] 2025-11-25 23:07:59,631 | INFO     | time since job start (88352s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:08:00,849 | INFO     | PID=26219 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:09:09] 2025-11-25 23:08:00,849 | INFO     | .. there are 9 such processes running
[2025-11-26 00:09:09] 2025-11-25 23:08:01,306 | INFO     | monitor loop #5952: job 0:6894264799 is in state 'finished'
[2025-11-26 00:09:09] 2025-11-25 23:08:01,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:09:09] 2025-11-25 23:08:01,850 | INFO     | time since job start (88354s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:08:03,812 | INFO     | monitor loop #5953: job 0:6894264799 is in state 'finished'
[2025-11-26 00:09:09] 2025-11-25 23:08:03,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:09:09] 2025-11-25 23:08:03,856 | INFO     | time since job start (88356s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:08:05,864 | INFO     | time since job start (88358s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:08:06,318 | INFO     | monitor loop #5954: job 0:6894264799 is in state 'finished'
[2025-11-26 00:09:09] 2025-11-25 23:08:06,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:09:09] 2025-11-25 23:08:07,873 | INFO     | time since job start (88360s) is within the limit (172800.0s)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,434 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:09:09] 2025-11-25 23:08:08,435 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:09:09] 2025-11-25 23:08:08,437 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6894264799/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,438 | INFO     | extracted standard info from prmon json
[2025-11-26 00:09:09] 2025-11-25 23:08:08,438 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:09:09] 2025-11-25 23:08:08,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:09:09] 2025-11-25 23:08:08,476 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:09:09] 2025-11-25 23:08:08,478 | INFO     | sum of square deviations: 922055852887.1117
[2025-11-26 00:09:09] 2025-11-25 23:08:08,542 | INFO     | sum of deviations: 4476680106997.69
[2025-11-26 00:09:09] 2025-11-25 23:08:08,542 | INFO     | mean x: 1764068128.7364395
[2025-11-26 00:09:09] 2025-11-25 23:08:08,542 | INFO     | mean y: 2826073.009735744
[2025-11-26 00:09:09] 2025-11-25 23:08:08,542 | INFO     | intersect: -8561913985.388785
[2025-11-26 00:09:09] 2025-11-25 23:08:08,544 | INFO     | chi2: 31.413802395610144
[2025-11-26 00:09:09] 2025-11-25 23:08:08,547 | INFO     | sum of square deviations: 912471741041.9403
[2025-11-26 00:09:09] 2025-11-25 23:08:08,616 | INFO     | sum of deviations: 4940788676897.111
[2025-11-26 00:09:09] 2025-11-25 23:08:08,616 | INFO     | mean x: 1764067976.2407537
[2025-11-26 00:09:09] 2025-11-25 23:08:08,616 | INFO     | mean y: 2833456.4982554084
[2025-11-26 00:09:09] 2025-11-25 23:08:08,616 | INFO     | intersect: -9549119431.74632
[2025-11-26 00:09:09] 2025-11-25 23:08:08,618 | INFO     | chi2: 28.303720992381056
[2025-11-26 00:09:09] 2025-11-25 23:08:08,619 | INFO     | current chi2=28.303720992381056 (change=9.90036597309118 %)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,619 | INFO     | right removable region: 1432
[2025-11-26 00:09:09] 2025-11-25 23:08:08,621 | INFO     | sum of square deviations: 912470656461.9403
[2025-11-26 00:09:09] 2025-11-25 23:08:08,688 | INFO     | sum of deviations: 3865497139350.311
[2025-11-26 00:09:09] 2025-11-25 23:08:08,688 | INFO     | mean x: 1764068281.2407537
[2025-11-26 00:09:09] 2025-11-25 23:08:08,688 | INFO     | mean y: 2835796.8918353105
[2025-11-26 00:09:09] 2025-11-25 23:08:08,689 | INFO     | intersect: -7470282211.302632
[2025-11-26 00:09:09] 2025-11-25 23:08:08,690 | INFO     | chi2: 26.393533753196646
[2025-11-26 00:09:09] 2025-11-25 23:08:08,691 | INFO     | current chi2=26.393533753196646 (change=15.981091939112233 %)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,691 | INFO     | left removable region: 10
[2025-11-26 00:09:09] 2025-11-25 23:08:08,693 | INFO     | sum of square deviations: 891618814866.375
[2025-11-26 00:09:09] 2025-11-25 23:08:08,759 | INFO     | sum of deviations: 3872628195514.168
[2025-11-26 00:09:09] 2025-11-25 23:08:08,760 | INFO     | mean x: 1764068250.7503517
[2025-11-26 00:09:09] 2025-11-25 23:08:08,760 | INFO     | mean y: 2853924.6624472574
[2025-11-26 00:09:09] 2025-11-25 23:08:08,760 | INFO     | intersect: -7659142808.42691
[2025-11-26 00:09:09] 2025-11-25 23:08:08,762 | INFO     | chi2: 18.40552540156601
[2025-11-26 00:09:09] 2025-11-25 23:08:08,762 | INFO     | current memory leak: 4.34 B/s (using 1422 data points, chi2=18.41)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,764 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,764 | INFO     | ..............................
[2025-11-26 00:09:09] 2025-11-25 23:08:08,764 | INFO     | . Timing measurements:
[2025-11-26 00:09:09] 2025-11-25 23:08:08,764 | INFO     | . get job = 0 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . initial setup = 19 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . payload setup = 183 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . stage-in = 0 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . payload execution = 87845 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . stage-out = 7 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | . log creation = 1 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,765 | INFO     | ..............................
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | 
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | job summary report
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | --------------------------------------------------
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | PanDA job id: 6894264799
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | task id: 47533967
[2025-11-26 00:09:09] 2025-11-25 23:08:08,893 | INFO     | errors: (none)
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | pilot state: finished 
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | transexitcode: 0
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | exeerrorcode: 0
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | exeerrordiag: 
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | exitcode: 0
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | exitmsg: OK
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | cpuconsumptiontime: 339442 s
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | nevents: 1000
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | neventsw: 0
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | pid: 32701
[2025-11-26 00:09:09] 2025-11-25 23:08:08,894 | INFO     | pgrp: 32701
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | corecount: 8
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | event service: False
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | sizes: {0: 2283482, 1: 2284167, 2: 2284366, 13: 2284366, 24: 2284422, 35: 2284450, 45: 2284606, 56: 2284634, 67: 2284662, 78: 2284690, 88: 2284746, 99: 2285054, 11
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | --------------------------------------------------
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | 
[2025-11-26 00:09:09] 2025-11-25 23:08:08,895 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 00:09:09] 2025-11-25 23:08:09,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:09:09] 2025-11-25 23:08:09,504 | INFO     | job 6894264799 has completed (purged errors)
[2025-11-26 00:09:09] 2025-11-25 23:08:09,505 | INFO     | overall cleanup function is called
[2025-11-26 00:09:09] 2025-11-25 23:08:10,523 | INFO     | --- collectZombieJob: --- 10, [32701]
[2025-11-26 00:09:09] 2025-11-25 23:08:10,523 | INFO     | zombie collector waiting for pid 32701
[2025-11-26 00:09:09] 2025-11-25 23:08:10,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:09:09] 2025-11-25 23:08:10,523 | INFO     | collected zombie processes
[2025-11-26 00:09:09] 2025-11-25 23:08:10,524 | INFO     | will attempt to kill all subprocesses of pid=32701
[2025-11-26 00:09:09] 2025-11-25 23:08:10,633 | INFO     | process IDs to be killed: [32701] (in reverse order)
[2025-11-26 00:09:09] 2025-11-25 23:08:11,362 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:09:09] 2025-11-25 23:08:11,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:09:09] 2025-11-25 23:08:11,366 | INFO     | did not find any defunct processes belonging to 32701
[2025-11-26 00:09:09] 2025-11-25 23:08:11,369 | INFO     | did not find any defunct processes belonging to 32701
[2025-11-26 00:09:09] 2025-11-25 23:08:11,445 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:09:09] 2025-11-25 23:08:11,445 | INFO     | ready for new job
[2025-11-26 00:09:09] 2025-11-25 23:08:11,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:09:09] 2025-11-25 23:08:11,452 | INFO     | ***************************************
[2025-11-26 00:09:09] 2025-11-25 23:08:11,452 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:09:09] 2025-11-25 23:08:11,452 | INFO     | ***************************************
[2025-11-26 00:09:09] 2025-11-25 23:08:11,452 | INFO     | 
[2025-11-26 00:09:09] 2025-11-25 23:08:11,453 | INFO     | pilot is running in a VM
[2025-11-26 00:09:09] 2025-11-25 23:08:11,453 | INFO     | architecture information:
[2025-11-26 00:09:09] 2025-11-25 23:08:11,466 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:09:09] 2025-11-25 23:08:11,720 | INFO     | cat /etc/os-release:
[2025-11-26 00:09:09] NAME="CentOS Linux"
[2025-11-26 00:09:09] VERSION="7 (Core)"
[2025-11-26 00:09:09] ID="centos"
[2025-11-26 00:09:09] ID_LIKE="rhel fedora"
[2025-11-26 00:09:09] VERSION_ID="7"
[2025-11-26 00:09:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:09:09] ANSI_COLOR="0;31"
[2025-11-26 00:09:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:09:09] HOME_URL="https://www.centos.org/"
[2025-11-26 00:09:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:09:09] 
[2025-11-26 00:09:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:09:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:09:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:09:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:09:09] 
[2025-11-26 00:09:09] 2025-11-25 23:08:11,721 | INFO     | ***************************************
[2025-11-26 00:09:09] 2025-11-25 23:08:12,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 00:09:09] 2025-11-25 23:08:12,491 | INFO     | sufficient remaining disk space (494534656000 B)
[2025-11-26 00:09:09] 2025-11-25 23:08:12,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:09:09] 2025-11-25 23:08:12,492 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:09:09] 2025-11-25 23:08:12,492 | INFO     | update_server=False
[2025-11-26 00:09:09] 2025-11-25 23:08:12,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:09:09] 2025-11-25 23:08:12,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:09:09] 2025-11-25 23:08:12,493 | INFO     | aborting loop
[2025-11-26 00:09:09] 2025-11-25 23:08:12,788 | INFO     | all payload control threads have been joined
[2025-11-26 00:09:09] 2025-11-25 23:08:12,975 | INFO     | all data control threads have been joined
[2025-11-26 00:09:09] 2025-11-25 23:08:13,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:09:09] 2025-11-25 23:08:13,086 | INFO     | all job control threads have been joined
[2025-11-26 00:09:09] 2025-11-25 23:08:13,498 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,499 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,609 | INFO     | [job] validate thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,609 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,669 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,698 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,794 | INFO     | [payload] control thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:13,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:09:09] 2025-11-25 23:08:13,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:09:09] 2025-11-25 23:08:13,981 | INFO     | [data] control thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:14,061 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:14,092 | INFO     | [job] control thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:14,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:14,913 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:14,949 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:15,015 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:15,041 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:17,912 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:09:09] 2025-11-25 23:08:41,091 | INFO     | PID=26219 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:09:09] 2025-11-25 23:08:41,091 | INFO     | .. there are 9 such processes running
[2025-11-26 00:09:09] 2025-11-25 23:08:41,093 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:09:09] 2025-11-25 23:08:41,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:09:09] 2025-11-25 23:08:41,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:09:09] 2025-11-25 23:09:00,360 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:09:09] 2025-11-25 23:09:01,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911845095232)>', '<ExcThread(monitor, started 139911537600256)>']
[2025-11-26 00:09:09] 2025-11-25 23:09:02,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:09:09] 2025-11-25 23:09:02,220 | INFO     | [monitor] control thread has ended
[2025-11-26 00:09:09] 2025-11-25 23:09:06,724 | INFO     | all workflow threads have been joined
[2025-11-26 00:09:09] 2025-11-25 23:09:06,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:09:09] 2025-11-25 23:09:06,724 | INFO     | traces error code: 0
[2025-11-26 00:09:09] 2025-11-25 23:09:06,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:09:09] 2025-11-25 23:09:07,089 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:09:09] 2025-11-25 23:09:07,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:09:09] 2025-11-25 23:09:07,275 [wrapper] pilotpid: 26219
[2025-11-26 00:09:09] 2025-11-25 23:09:07,363 [wrapper] Pilot exit status: 0
[2025-11-26 00:09:09] 2025-11-25 23:09:07,683 [wrapper] pandaids: 6894264799
[2025-11-26 00:09:09] 2025-11-25 23:09:08,608 [wrapper] cleanup supervisor_pilot 28806 26220
[2025-11-26 00:09:09] 2025-11-25 23:09:08,712 [wrapper] Test setup, not cleaning
[2025-11-26 00:09:09] 2025-11-25 23:09:08,814 [wrapper] apfmon messages muted
[2025-11-26 00:09:09] 2025-11-25 23:09:08,889 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:09:09] 2025-11-25 23:09:08,939 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:09:09]  *** Error codes and diagnostics ***
[2025-11-26 00:09:09]     "exeErrorCode": 0,
[2025-11-26 00:09:09]     "exeErrorDiag": "",
[2025-11-26 00:09:09]     "pilotErrorCode": 0,
[2025-11-26 00:09:09]     "pilotErrorDiag": "",
[2025-11-26 00:09:09]  *** Listing of results directory ***
[2025-11-26 00:09:09] total 1325140
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-11-26 00:09:09] -rwx------. 1 boinc boinc     36292 Nov 21 05:52 runpilot2-wrapper.sh
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc      5112 Nov 21 05:52 queuedata.json
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc       100 Nov 24 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:09:09] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 23:30 run_atlas
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc       105 Nov 24 23:30 job.xml
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc 408146384 Nov 24 23:30 EVNT.47493127._002203.pool.root.1
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc    590107 Nov 24 23:30 input.tar.gz
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc      6392 Nov 24 23:30 init_data.xml
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:30 start_atlas.sh
[2025-11-26 00:09:09] drwxrwx--x. 2 boinc boinc        68 Nov 24 23:30 shared
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc         0 Nov 24 23:30 boinc_lockfile
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc      2786 Nov 24 23:31 pandaJob.out
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc    991801 Nov 24 23:35 agis_schedconf.cvmfs.json
[2025-11-26 00:09:09] drwx------. 5 boinc boinc      4096 Nov 24 23:35 pilot3
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc       533 Nov 25 23:41 boinc_task_state.xml
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc 916109340 Nov 26 00:05 HITS.47533967._001749.pool.root.1
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc      1032 Nov 26 00:06 memory_monitor_summary.json
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc   1516240 Nov 26 00:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc   2541511 Nov 26 00:06 log.47533967._001749.job.log.tgz.1
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc      8643 Nov 26 00:08 heartbeat.json
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:08 wrapper_checkpoint.txt
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:08 boinc_mmap_file
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc        95 Nov 26 00:08 pilot_heartbeat.json
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc      4884 Nov 26 00:09 pilotlog.txt
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc  11848579 Nov 26 00:09 log.47533967._001749.job.log.1
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc       353 Nov 26 00:09 output.list
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:09 runtime_log
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc  14407680 Nov 26 00:09 result.tar.gz
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc      8817 Nov 26 00:09 runtime_log.err
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc       662 Nov 26 00:09 N7uLDmdJYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH3IKDmC9KaQn.diag
[2025-11-26 00:09:09] -rw-r--r--. 1 boinc boinc     21500 Nov 26 00:09 stderr.txt
[2025-11-26 00:09:09] HITS file was successfully produced:
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc 916109340 Nov 26 00:05 shared/HITS.pool.root.1
[2025-11-26 00:09:09]  *** Contents of shared directory: ***
[2025-11-26 00:09:09] total 1307892
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc 408146384 Nov 24 23:30 ATLAS.root_0
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc    590107 Nov 24 23:30 input.tar.gz
[2025-11-26 00:09:09] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:30 start_atlas.sh
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc 916109340 Nov 26 00:05 HITS.pool.root.1
[2025-11-26 00:09:09] -rw-------. 1 boinc boinc  14407680 Nov 26 00:09 result.tar.gz
00:09:11 (22445): run_atlas exited; CPU time 339900.150816
00:09:11 (22445): called boinc_finish(0)

</stderr_txt>
]]>

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