Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:07:35 (28751): wrapper (7.7.26015): starting
00:07:35 (28751): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:07:35] Arguments: --nthreads 8
[2025-11-25 00:07:35] Threads: 8
[2025-11-25 00:07:35] Checking for CVMFS
[2025-11-25 00:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:07:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:07:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:07:37] 2.11.2.0 32728 282955 143428 153261 3 87 23142934 25165825 1027 130560 10 139168043 99.886 78546842 2941 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 00:07:37] CVMFS is ok
[2025-11-25 00:07:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:07:37] Checking for apptainer binary...
[2025-11-25 00:07:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:07:37] Running /usr/bin/apptainer --version
[2025-11-25 00:07:38] apptainer version 1.3.2-1.el7
[2025-11-25 00:07:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:07:45] cg-vwn337.simple-grid.lan
[2025-11-25 00:07:45] apptainer works
[2025-11-25 00:07:45] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:07:45] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:07:46] Starting ATLAS job with PandaID=6893885321
[2025-11-25 00:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:10:35]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:10:35] 2025-11-25 23:09:30,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:10:35] 2025-11-25 23:09:31,873 | INFO     | PID=32495 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:10:35] 2025-11-25 23:09:31,873 | INFO     | .. there are 9 such processes running
[2025-11-26 00:10:35] 2025-11-25 23:09:32,874 | INFO     | time since job start (86257s) is within the limit (172800.0s)
[2025-11-26 00:10:35] 2025-11-25 23:09:33,382 | INFO     | monitor loop #5797: job 0:6893885321 is in state 'finished'
[2025-11-26 00:10:35] 2025-11-25 23:09:33,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:10:35] 2025-11-25 23:09:34,885 | INFO     | time since job start (86259s) is within the limit (172800.0s)
[2025-11-26 00:10:35] 2025-11-25 23:09:35,887 | INFO     | monitor loop #5798: job 0:6893885321 is in state 'finished'
[2025-11-26 00:10:35] 2025-11-25 23:09:35,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:10:35] 2025-11-25 23:09:36,894 | INFO     | time since job start (86261s) is within the limit (172800.0s)
[2025-11-26 00:10:35] 2025-11-25 23:09:38,394 | INFO     | monitor loop #5799: job 0:6893885321 is in state 'finished'
[2025-11-26 00:10:35] 2025-11-25 23:09:38,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:10:35] 2025-11-25 23:09:38,902 | INFO     | time since job start (86263s) is within the limit (172800.0s)
[2025-11-26 00:10:35] 2025-11-25 23:09:40,898 | INFO     | monitor loop #5800: job 0:6893885321 is in state 'finished'
[2025-11-26 00:10:35] 2025-11-25 23:09:40,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:10:35] 2025-11-25 23:09:40,909 | INFO     | time since job start (86265s) is within the limit (172800.0s)
[2025-11-26 00:10:35] 2025-11-25 23:09:40,992 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:10:35] 2025-11-25 23:09:40,993 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:10:35] 2025-11-25 23:09:40,995 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6893885321/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:10:35] 2025-11-25 23:09:40,996 | INFO     | extracted standard info from prmon json
[2025-11-26 00:10:35] 2025-11-25 23:09:40,996 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:10:35] 2025-11-25 23:09:40,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:10:35] 2025-11-25 23:09:41,022 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:10:35] 2025-11-25 23:09:41,024 | INFO     | sum of square deviations: 858187065205.1488
[2025-11-26 00:10:35] 2025-11-25 23:09:41,096 | INFO     | sum of deviations: 3810683058003.1074
[2025-11-26 00:10:35] 2025-11-25 23:09:41,097 | INFO     | mean x: 1764069257.7029915
[2025-11-26 00:10:35] 2025-11-25 23:09:41,097 | INFO     | mean y: 2836938.141737892
[2025-11-26 00:10:35] 2025-11-25 23:09:41,097 | INFO     | intersect: -7830314021.627092
[2025-11-26 00:10:35] 2025-11-25 23:09:41,099 | INFO     | chi2: 25.317701921002687
[2025-11-26 00:10:35] 2025-11-25 23:09:41,101 | INFO     | sum of square deviations: 849051576487.8855
[2025-11-26 00:10:35] 2025-11-25 23:09:41,160 | INFO     | sum of deviations: 4263660819462.344
[2025-11-26 00:10:35] 2025-11-25 23:09:41,160 | INFO     | mean x: 1764069105.207291
[2025-11-26 00:10:35] 2025-11-25 23:09:41,160 | INFO     | mean y: 2844498.260900643
[2025-11-26 00:10:35] 2025-11-25 23:09:41,160 | INFO     | intersect: -8855736693.954386
[2025-11-26 00:10:35] 2025-11-25 23:09:41,162 | INFO     | chi2: 22.26738852631196
[2025-11-26 00:10:35] 2025-11-25 23:09:41,162 | INFO     | current chi2=22.26738852631196 (change=12.04814482850156 %)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,162 | INFO     | right removable region: 1398
[2025-11-26 00:10:35] 2025-11-25 23:09:41,171 | INFO     | sum of square deviations: 849050546197.8853
[2025-11-26 00:10:35] 2025-11-25 23:09:41,226 | INFO     | sum of deviations: 3211389916186.564
[2025-11-26 00:10:35] 2025-11-25 23:09:41,226 | INFO     | mean x: 1764069410.207291
[2025-11-26 00:10:35] 2025-11-25 23:09:41,227 | INFO     | mean y: 2846941.1015010723
[2025-11-26 00:10:35] 2025-11-25 23:09:41,227 | INFO     | intersect: -6669446882.583908
[2025-11-26 00:10:35] 2025-11-25 23:09:41,228 | INFO     | chi2: 20.336881525073792
[2025-11-26 00:10:35] 2025-11-25 23:09:41,229 | INFO     | current chi2=20.336881525073792 (change=19.673272129793816 %)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,229 | INFO     | left removable region: 10
[2025-11-26 00:10:35] 2025-11-25 23:09:41,231 | INFO     | sum of square deviations: 829180163157.7252
[2025-11-26 00:10:35] 2025-11-25 23:09:41,282 | INFO     | sum of deviations: 3230005103452.8867
[2025-11-26 00:10:35] 2025-11-25 23:09:41,283 | INFO     | mean x: 1764069379.7168589
[2025-11-26 00:10:35] 2025-11-25 23:09:41,283 | INFO     | mean y: 2865278.432276657
[2025-11-26 00:10:35] 2025-11-25 23:09:41,283 | INFO     | intersect: -6868926103.589206
[2025-11-26 00:10:35] 2025-11-25 23:09:41,285 | INFO     | chi2: 12.689737906214544
[2025-11-26 00:10:35] 2025-11-25 23:09:41,285 | INFO     | current memory leak: 3.90 B/s (using 1388 data points, chi2=12.69)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | ..............................
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | . Timing measurements:
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | . get job = 0 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | . initial setup = 10 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | . payload setup = 188 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,288 | INFO     | . stage-in = 0 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,289 | INFO     | . payload execution = 85766 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,289 | INFO     | . stage-out = 5 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,289 | INFO     | . log creation = 2 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,289 | INFO     | ..............................
[2025-11-26 00:10:35] 2025-11-25 23:09:41,414 | INFO     | 
[2025-11-26 00:10:35] 2025-11-25 23:09:41,414 | INFO     | job summary report
[2025-11-26 00:10:35] 2025-11-25 23:09:41,414 | INFO     | --------------------------------------------------
[2025-11-26 00:10:35] 2025-11-25 23:09:41,414 | INFO     | PanDA job id: 6893885321
[2025-11-26 00:10:35] 2025-11-25 23:09:41,414 | INFO     | task id: 47523449
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | errors: (none)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | pilot state: finished 
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | transexitcode: 0
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | exeerrorcode: 0
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | exeerrordiag: 
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | exitcode: 0
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | exitmsg: OK
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | cpuconsumptiontime: 335008 s
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | nevents: 1000
[2025-11-26 00:10:35] 2025-11-25 23:09:41,415 | INFO     | neventsw: 0
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | pid: 6604
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | pgrp: 6604
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | corecount: 8
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | event service: False
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | sizes: {0: 2283482, 1: 2284167, 2: 2284366, 13: 2284366, 23: 2284422, 34: 2284450, 45: 2284606, 56: 2284634, 66: 2284662, 77: 2284690, 88: 2284746, 99: 2285054, 10
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | --------------------------------------------------
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | 
[2025-11-26 00:10:35] 2025-11-25 23:09:41,416 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-26 00:10:35] 2025-11-25 23:09:41,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,443 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:10:35] 2025-11-25 23:09:41,444 | INFO     | job 6893885321 has completed (purged errors)
[2025-11-26 00:10:35] 2025-11-25 23:09:41,444 | INFO     | overall cleanup function is called
[2025-11-26 00:10:35] 2025-11-25 23:09:42,460 | INFO     | --- collectZombieJob: --- 10, [6604]
[2025-11-26 00:10:35] 2025-11-25 23:09:42,461 | INFO     | zombie collector waiting for pid 6604
[2025-11-26 00:10:35] 2025-11-25 23:09:42,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:10:35] 2025-11-25 23:09:42,461 | INFO     | collected zombie processes
[2025-11-26 00:10:35] 2025-11-25 23:09:42,461 | INFO     | will attempt to kill all subprocesses of pid=6604
[2025-11-26 00:10:35] 2025-11-25 23:09:42,567 | INFO     | process IDs to be killed: [6604] (in reverse order)
[2025-11-26 00:10:35] 2025-11-25 23:09:43,055 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:10:35] 2025-11-25 23:09:43,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:10:35] 2025-11-25 23:09:43,059 | INFO     | did not find any defunct processes belonging to 6604
[2025-11-26 00:10:35] 2025-11-25 23:09:43,062 | INFO     | did not find any defunct processes belonging to 6604
[2025-11-26 00:10:35] 2025-11-25 23:09:43,117 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:10:35] 2025-11-25 23:09:43,117 | INFO     | ready for new job
[2025-11-26 00:10:35] 2025-11-25 23:09:43,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:10:35] 2025-11-25 23:09:43,125 | INFO     | ***************************************
[2025-11-26 00:10:35] 2025-11-25 23:09:43,126 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:10:35] 2025-11-25 23:09:43,126 | INFO     | ***************************************
[2025-11-26 00:10:35] 2025-11-25 23:09:43,126 | INFO     | 
[2025-11-26 00:10:35] 2025-11-25 23:09:43,127 | INFO     | pilot is running in a VM
[2025-11-26 00:10:35] 2025-11-25 23:09:43,127 | INFO     | architecture information:
[2025-11-26 00:10:35] 2025-11-25 23:09:43,131 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:10:35] 2025-11-25 23:09:43,346 | INFO     | cat /etc/os-release:
[2025-11-26 00:10:35] NAME="CentOS Linux"
[2025-11-26 00:10:35] VERSION="7 (Core)"
[2025-11-26 00:10:35] ID="centos"
[2025-11-26 00:10:35] ID_LIKE="rhel fedora"
[2025-11-26 00:10:35] VERSION_ID="7"
[2025-11-26 00:10:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:10:35] ANSI_COLOR="0;31"
[2025-11-26 00:10:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:10:35] HOME_URL="https://www.centos.org/"
[2025-11-26 00:10:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:10:35] 
[2025-11-26 00:10:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:10:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:10:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:10:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:10:35] 
[2025-11-26 00:10:35] 2025-11-25 23:09:43,346 | INFO     | ***************************************
[2025-11-26 00:10:35] 2025-11-25 23:09:43,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-26 00:10:35] 2025-11-25 23:09:43,997 | INFO     | sufficient remaining disk space (494767439872 B)
[2025-11-26 00:10:35] 2025-11-25 23:09:43,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:10:35] 2025-11-25 23:09:43,998 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:10:35] 2025-11-25 23:09:43,998 | INFO     | update_server=False
[2025-11-26 00:10:35] 2025-11-25 23:09:43,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:10:35] 2025-11-25 23:09:43,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:10:35] 2025-11-25 23:09:44,007 | INFO     | all data control threads have been joined
[2025-11-26 00:10:35] 2025-11-25 23:09:44,349 | INFO     | all payload control threads have been joined
[2025-11-26 00:10:35] 2025-11-25 23:09:44,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:10:35] 2025-11-25 23:09:44,412 | INFO     | aborting loop
[2025-11-26 00:10:35] 2025-11-25 23:09:45,004 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,013 | INFO     | [data] control thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,173 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,197 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,237 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,356 | INFO     | [payload] control thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,418 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,463 | INFO     | all job control threads have been joined
[2025-11-26 00:10:35] 2025-11-25 23:09:45,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:10:35] 2025-11-25 23:09:45,670 | INFO     | [job] validate thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,750 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,755 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:45,798 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:46,005 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:46,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:46,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:10:35] 2025-11-25 23:09:46,470 | INFO     | [job] control thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:47,438 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:09:49,554 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:10:35] 2025-11-25 23:10:14,110 | INFO     | PID=32495 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:10:35] 2025-11-25 23:10:14,110 | INFO     | .. there are 9 such processes running
[2025-11-26 00:10:35] 2025-11-25 23:10:14,111 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:10:35] 2025-11-25 23:10:14,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:10:35] 2025-11-25 23:10:14,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:10:35] 2025-11-25 23:10:24,525 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:10:35] 2025-11-25 23:10:25,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790565070656)>', '<ExcThread(monitor, started 139790045411072)>']
[2025-11-26 00:10:35] 2025-11-25 23:10:26,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:10:35] 2025-11-25 23:10:26,182 | INFO     | [monitor] control thread has ended
[2025-11-26 00:10:35] 2025-11-25 23:10:30,870 | INFO     | all workflow threads have been joined
[2025-11-26 00:10:35] 2025-11-25 23:10:30,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:10:35] 2025-11-25 23:10:30,871 | INFO     | traces error code: 0
[2025-11-26 00:10:35] 2025-11-25 23:10:30,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:10:35] 2025-11-25 23:10:31,278 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:10:35] 2025-11-25 23:10:31,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:10:35] 2025-11-25 23:10:31,412 [wrapper] pilotpid: 32495
[2025-11-26 00:10:35] 2025-11-25 23:10:31,491 [wrapper] Pilot exit status: 0
[2025-11-26 00:10:35] 2025-11-25 23:10:32,044 [wrapper] pandaids: 6893885321
[2025-11-26 00:10:35] 2025-11-25 23:10:32,747 [wrapper] cleanup supervisor_pilot 31344 32496
[2025-11-26 00:10:35] 2025-11-25 23:10:32,829 [wrapper] Test setup, not cleaning
[2025-11-26 00:10:35] 2025-11-25 23:10:32,877 [wrapper] apfmon messages muted
[2025-11-26 00:10:35] 2025-11-25 23:10:32,928 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:10:35] 2025-11-25 23:10:33,045 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:10:35]  *** Error codes and diagnostics ***
[2025-11-26 00:10:35]     "exeErrorCode": 0,
[2025-11-26 00:10:35]     "exeErrorDiag": "",
[2025-11-26 00:10:35]     "pilotErrorCode": 0,
[2025-11-26 00:10:35]     "pilotErrorDiag": "",
[2025-11-26 00:10:35]  *** Listing of results directory ***
[2025-11-26 00:10:35] total 1325704
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc    576529 Nov 20 22:55 pilot3.tar.gz
[2025-11-26 00:10:35] -rwx------. 1 boinc boinc     36292 Nov 20 23:02 runpilot2-wrapper.sh
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc      5112 Nov 20 23:02 queuedata.json
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:10:35] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:07 run_atlas
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:07 job.xml
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc      6391 Nov 25 00:07 init_data.xml
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc 411696727 Nov 25 00:07 EVNT.47493127._000938.pool.root.1
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:07 start_atlas.sh
[2025-11-26 00:10:35] drwxrwx--x. 2 boinc boinc        68 Nov 25 00:07 shared
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc    590094 Nov 25 00:07 input.tar.gz
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:07 boinc_lockfile
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc      2786 Nov 25 00:07 pandaJob.out
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc    991801 Nov 25 00:11 agis_schedconf.cvmfs.json
[2025-11-26 00:10:35] drwx------. 5 boinc boinc      4096 Nov 25 00:11 pilot3
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc       533 Nov 25 23:43 boinc_task_state.xml
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc 913966802 Nov 26 00:06 HITS.47523449._009373.pool.root.1
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc      1031 Nov 26 00:07 memory_monitor_summary.json
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc   1516240 Nov 26 00:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc   2488674 Nov 26 00:07 log.47523449._009373.job.log.tgz.1
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc      8643 Nov 26 00:09 heartbeat.json
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc        95 Nov 26 00:10 pilot_heartbeat.json
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:10 boinc_mmap_file
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:10 wrapper_checkpoint.txt
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc      4884 Nov 26 00:10 pilotlog.txt
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc  11484825 Nov 26 00:10 log.47523449._009373.job.log.1
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc       353 Nov 26 00:10 output.list
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:10 runtime_log
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc  13998080 Nov 26 00:10 result.tar.gz
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc      8817 Nov 26 00:10 runtime_log.err
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc       662 Nov 26 00:10 hPDODmZuRg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmobIKDm3SRv9n.diag
[2025-11-26 00:10:35] -rw-r--r--. 1 boinc boinc     21513 Nov 26 00:10 stderr.txt
[2025-11-26 00:10:35] HITS file was successfully produced:
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc 913966802 Nov 26 00:06 shared/HITS.pool.root.1
[2025-11-26 00:10:35]  *** Contents of shared directory: ***
[2025-11-26 00:10:35] total 1308864
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc 411696727 Nov 25 00:07 ATLAS.root_0
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:07 start_atlas.sh
[2025-11-26 00:10:35] -rw-r--r--. 2 boinc boinc    590094 Nov 25 00:07 input.tar.gz
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc 913966802 Nov 26 00:06 HITS.pool.root.1
[2025-11-26 00:10:35] -rw-------. 1 boinc boinc  13998080 Nov 26 00:10 result.tar.gz
00:10:36 (28751): run_atlas exited; CPU time 335439.149418
00:10:36 (28751): called boinc_finish(0)

</stderr_txt>
]]>

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