Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:23:13 (463006): wrapper (7.7.26015): starting
07:23:13 (463006): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:23:13] Arguments: --nthreads 8
[2025-11-22 07:23:13] Threads: 8
[2025-11-22 07:23:13] Checking for CVMFS
[2025-11-22 07:23:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:23:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:23:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:23:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:23:14] 2.13.2.0 1687 3576 47936 153164 3 80 2596595 4096000 0 130560 0 1287060 99.973 133399 618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 07:23:14] CVMFS is ok
[2025-11-22 07:23:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:23:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:23:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 07:23:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 07:23:14] Further information can be found at the LHC@home message board.
[2025-11-22 07:23:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:23:14] Checking for apptainer binary...
[2025-11-22 07:23:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:23:14] Running /usr/bin/apptainer --version
[2025-11-22 07:23:14] apptainer version 1.4.3
[2025-11-22 07:23:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:23:15] lab01ubuntu
[2025-11-22 07:23:15] apptainer works
[2025-11-22 07:23:15] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:23:15] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:23:15] Starting ATLAS job with PandaID=6894290667
[2025-11-22 07:23:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 17:14:52]  *** The last 200 lines of the pilot log: ***
[2025-11-22 17:14:52] 2025-11-22 17:13:46,457 | INFO     | time since job start (35398s) is within the limit (172800.0s)
[2025-11-22 17:14:52] 2025-11-22 17:13:46,688 | INFO     | monitor loop #2680: job 0:6894290667 is in state 'finished'
[2025-11-22 17:14:52] 2025-11-22 17:13:46,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:14:52] 2025-11-22 17:13:48,464 | INFO     | time since job start (35400s) is within the limit (172800.0s)
[2025-11-22 17:14:52] 2025-11-22 17:13:49,192 | INFO     | monitor loop #2681: job 0:6894290667 is in state 'finished'
[2025-11-22 17:14:52] 2025-11-22 17:13:49,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:14:52] 2025-11-22 17:13:49,651 | INFO     | PID=466733 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 17:14:52] 2025-11-22 17:13:50,653 | INFO     | time since job start (35402s) is within the limit (172800.0s)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,261 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 17:14:52] 2025-11-22 17:13:51,263 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-11-22 17:14:52] 2025-11-22 17:13:51,266 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6894290667/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,268 | INFO     | extracted standard info from prmon json
[2025-11-22 17:14:52] 2025-11-22 17:13:51,269 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 17:14:52] 2025-11-22 17:13:51,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 17:14:52] 2025-11-22 17:13:51,288 | INFO     | fitting pss+swap vs Time
[2025-11-22 17:14:52] 2025-11-22 17:13:51,290 | INFO     | sum of square deviations: 60188402930.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,306 | INFO     | sum of deviations: 568378369529.0002
[2025-11-22 17:14:52] 2025-11-22 17:13:51,307 | INFO     | mean x: 1763813921.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,307 | INFO     | mean y: 2859106.5405872194
[2025-11-22 17:14:52] 2025-11-22 17:13:51,307 | INFO     | intersect: -16653400766.918278
[2025-11-22 17:14:52] 2025-11-22 17:13:51,309 | INFO     | chi2: 13.132083744558418
[2025-11-22 17:14:52] 2025-11-22 17:13:51,311 | INFO     | sum of square deviations: 58642541387.5
[2025-11-22 17:14:52] 2025-11-22 17:13:51,326 | INFO     | sum of deviations: 755113274174.0001
[2025-11-22 17:14:52] 2025-11-22 17:13:51,327 | INFO     | mean x: 1763813768.5
[2025-11-22 17:14:52] 2025-11-22 17:13:51,327 | INFO     | mean y: 2877532.9825783973
[2025-11-22 17:14:52] 2025-11-22 17:13:51,327 | INFO     | intersect: -22708948357.44711
[2025-11-22 17:14:52] 2025-11-22 17:13:51,329 | INFO     | chi2: 10.15496103586817
[2025-11-22 17:14:52] 2025-11-22 17:13:51,329 | INFO     | current chi2=10.15496103586817 (change=22.6706040457889 %)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,329 | INFO     | right removable region: 573
[2025-11-22 17:14:52] 2025-11-22 17:13:51,331 | INFO     | sum of square deviations: 58642541387.5
[2025-11-22 17:14:52] 2025-11-22 17:13:51,347 | INFO     | sum of deviations: 359703744395.00006
[2025-11-22 17:14:52] 2025-11-22 17:13:51,347 | INFO     | mean x: 1763814073.5
[2025-11-22 17:14:52] 2025-11-22 17:13:51,347 | INFO     | mean y: 2879681.8397212545
[2025-11-22 17:14:52] 2025-11-22 17:13:51,348 | INFO     | intersect: -10816066967.525389
[2025-11-22 17:14:52] 2025-11-22 17:13:51,349 | INFO     | chi2: 9.625257793936427
[2025-11-22 17:14:52] 2025-11-22 17:13:51,349 | INFO     | current chi2=9.625257793936427 (change=26.7042612492867 %)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,351 | INFO     | sum of square deviations: 57123378020.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,366 | INFO     | sum of deviations: 196906172500.99994
[2025-11-22 17:14:52] 2025-11-22 17:13:51,367 | INFO     | mean x: 1763814226.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,367 | INFO     | mean y: 2896021.09314587
[2025-11-22 17:14:52] 2025-11-22 17:13:51,368 | INFO     | intersect: -6077029926.6138525
[2025-11-22 17:14:52] 2025-11-22 17:13:51,369 | INFO     | chi2: 7.621253386685966
[2025-11-22 17:14:52] 2025-11-22 17:13:51,369 | INFO     | current chi2=7.621253386685966 (change=20.82026736481711 %)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,370 | INFO     | left removable region: 20
[2025-11-22 17:14:52] 2025-11-22 17:13:51,371 | INFO     | sum of square deviations: 52438758092.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,381 | INFO     | sum of deviations: 263306858374.99994
[2025-11-22 17:14:52] 2025-11-22 17:13:51,381 | INFO     | mean x: 1763814348.0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,381 | INFO     | mean y: 2937556.265822785
[2025-11-22 17:14:52] 2025-11-22 17:13:51,381 | INFO     | intersect: -8853573002.466896
[2025-11-22 17:14:52] 2025-11-22 17:13:51,382 | INFO     | chi2: 2.1831113503554156
[2025-11-22 17:14:52] 2025-11-22 17:13:51,382 | INFO     | current memory leak: 5.02 B/s (using 553 data points, chi2=2.18)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | could have reported an average CPU frequency of 2893 MHz (23 samples)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | ..............................
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . Timing measurements:
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . get job = 0 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . initial setup = 4 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . payload setup = 18 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . stage-in = 0 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . payload execution = 35323 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,383 | INFO     | . stage-out = 4 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,384 | INFO     | . log creation = 0 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,384 | INFO     | ..............................
[2025-11-22 17:14:52] 2025-11-22 17:13:51,922 | INFO     | 
[2025-11-22 17:14:52] 2025-11-22 17:13:51,923 | INFO     | job summary report
[2025-11-22 17:14:52] 2025-11-22 17:13:51,923 | INFO     | --------------------------------------------------
[2025-11-22 17:14:52] 2025-11-22 17:13:51,924 | INFO     | PanDA job id: 6894290667
[2025-11-22 17:14:52] 2025-11-22 17:13:51,924 | INFO     | task id: 47533967
[2025-11-22 17:14:52] 2025-11-22 17:13:51,924 | INFO     | errors: (none)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 17:14:52] 2025-11-22 17:13:51,925 | INFO     | pilot state: finished 
[2025-11-22 17:14:52] 2025-11-22 17:13:51,925 | INFO     | transexitcode: 0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,925 | INFO     | exeerrorcode: 0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,926 | INFO     | exeerrordiag: 
[2025-11-22 17:14:52] 2025-11-22 17:13:51,926 | INFO     | exitcode: 0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,926 | INFO     | exitmsg: OK
[2025-11-22 17:14:52] 2025-11-22 17:13:51,927 | INFO     | cpuconsumptiontime: 268499 s
[2025-11-22 17:14:52] 2025-11-22 17:13:51,927 | INFO     | nevents: 1000
[2025-11-22 17:14:52] 2025-11-22 17:13:51,927 | INFO     | neventsw: 0
[2025-11-22 17:14:52] 2025-11-22 17:13:51,927 | INFO     | pid: 473156
[2025-11-22 17:14:52] 2025-11-22 17:13:51,928 | INFO     | pgrp: 473156
[2025-11-22 17:14:52] 2025-11-22 17:13:51,928 | INFO     | corecount: 8
[2025-11-22 17:14:52] 2025-11-22 17:13:51,928 | INFO     | event service: False
[2025-11-22 17:14:52] 2025-11-22 17:13:51,928 | INFO     | sizes: {0: 2298536, 1: 2298620, 2: 2298819, 13: 2298819, 14: 2299137, 24: 2299165, 35345: 2340789, 35350: 2349797, 35351: 2349853, 35367: 2350099}
[2025-11-22 17:14:52] 2025-11-22 17:13:51,929 | INFO     | --------------------------------------------------
[2025-11-22 17:14:52] 2025-11-22 17:13:51,929 | INFO     | 
[2025-11-22 17:14:52] 2025-11-22 17:13:51,930 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-22 17:14:52] 2025-11-22 17:13:51,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,988 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 17:14:52] 2025-11-22 17:13:51,988 | INFO     | job 6894290667 has completed (purged errors)
[2025-11-22 17:14:52] 2025-11-22 17:13:51,989 | INFO     | overall cleanup function is called
[2025-11-22 17:14:52] 2025-11-22 17:13:53,020 | INFO     | --- collectZombieJob: --- 10, [473156]
[2025-11-22 17:14:52] 2025-11-22 17:13:53,020 | INFO     | zombie collector waiting for pid 473156
[2025-11-22 17:14:52] 2025-11-22 17:13:53,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 17:14:52] 2025-11-22 17:13:53,021 | INFO     | collected zombie processes
[2025-11-22 17:14:52] 2025-11-22 17:13:53,021 | INFO     | will attempt to kill all subprocesses of pid=473156
[2025-11-22 17:14:52] 2025-11-22 17:13:53,193 | INFO     | process IDs to be killed: [473156] (in reverse order)
[2025-11-22 17:14:52] 2025-11-22 17:13:53,282 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 17:14:52] 2025-11-22 17:13:53,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 17:14:52] 2025-11-22 17:13:53,288 | INFO     | did not find any defunct processes belonging to 473156
[2025-11-22 17:14:52] 2025-11-22 17:13:53,292 | INFO     | did not find any defunct processes belonging to 473156
[2025-11-22 17:14:52] 2025-11-22 17:13:53,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 17:14:52] 2025-11-22 17:13:53,297 | INFO     | ready for new job
[2025-11-22 17:14:52] 2025-11-22 17:13:53,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 17:14:52] 2025-11-22 17:13:53,304 | INFO     | ***************************************
[2025-11-22 17:14:52] 2025-11-22 17:13:53,304 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 17:14:52] 2025-11-22 17:13:53,305 | INFO     | ***************************************
[2025-11-22 17:14:52] 2025-11-22 17:13:53,305 | INFO     | 
[2025-11-22 17:14:52] 2025-11-22 17:13:53,306 | INFO     | pilot is running in a VM
[2025-11-22 17:14:52] 2025-11-22 17:13:53,306 | INFO     | architecture information:
[2025-11-22 17:14:52] 2025-11-22 17:13:53,308 | INFO     | executing command: cat /etc/os-release
[2025-11-22 17:14:52] 2025-11-22 17:13:53,342 | INFO     | cat /etc/os-release:
[2025-11-22 17:14:52] NAME="CentOS Linux"
[2025-11-22 17:14:52] VERSION="7 (Core)"
[2025-11-22 17:14:52] ID="centos"
[2025-11-22 17:14:52] ID_LIKE="rhel fedora"
[2025-11-22 17:14:52] VERSION_ID="7"
[2025-11-22 17:14:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 17:14:52] ANSI_COLOR="0;31"
[2025-11-22 17:14:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 17:14:52] HOME_URL="https://www.centos.org/"
[2025-11-22 17:14:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 17:14:52] 
[2025-11-22 17:14:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 17:14:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 17:14:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 17:14:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 17:14:52] 
[2025-11-22 17:14:52] 2025-11-22 17:13:53,343 | INFO     | ***************************************
[2025-11-22 17:14:52] 2025-11-22 17:13:53,847 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-22 17:14:52] 2025-11-22 17:13:53,887 | INFO     | sufficient remaining disk space (15568207872 B)
[2025-11-22 17:14:52] 2025-11-22 17:13:53,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 17:14:52] 2025-11-22 17:13:53,889 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 17:14:52] 2025-11-22 17:13:53,889 | INFO     | update_server=False
[2025-11-22 17:14:52] 2025-11-22 17:13:53,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 17:14:52] 2025-11-22 17:13:54,200 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 17:14:52] 2025-11-22 17:13:54,200 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 17:14:52] 2025-11-22 17:13:54,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:14:52] 2025-11-22 17:13:54,201 | INFO     | will abort loop
[2025-11-22 17:14:52] 2025-11-22 17:13:54,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 17:14:52] 2025-11-22 17:13:54,511 | INFO     | all payload control threads have been joined
[2025-11-22 17:14:52] 2025-11-22 17:13:54,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 17:14:52] 2025-11-22 17:13:54,896 | INFO     | [job] retrieve thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:54,964 | INFO     | all data control threads have been joined
[2025-11-22 17:14:52] 2025-11-22 17:13:55,207 | INFO     | [job] job monitor thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,317 | INFO     | all job control threads have been joined
[2025-11-22 17:14:52] 2025-11-22 17:13:55,426 | INFO     | [data] copytool_in thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,432 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,517 | INFO     | [payload] control thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,769 | INFO     | [payload] validate_post thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,863 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,938 | INFO     | [payload] failed_post thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:55,970 | INFO     | [data] control thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:56,323 | INFO     | [job] control thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:56,336 | INFO     | [job] validate thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:56,378 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:56,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:14:52] 2025-11-22 17:13:56,598 | INFO     | [data] copytool_out thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:57,478 | INFO     | [job] queue monitor thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:13:58,294 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 17:14:52] 2025-11-22 17:14:23,883 | INFO     | PID=466733 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 17:14:52] 2025-11-22 17:14:23,884 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 17:14:52] 2025-11-22 17:14:23,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 17:14:52] 2025-11-22 17:14:23,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 17:14:52] 2025-11-22 17:14:45,517 | INFO     | [monitor] cgroup control has ended
[2025-11-22 17:14:52] 2025-11-22 17:14:47,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130899559548736)>', '<ExcThread(monitor, started 130898766841600)>']
[2025-11-22 17:14:52] 2025-11-22 17:14:47,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 17:14:52] 2025-11-22 17:14:47,008 | INFO     | [monitor] control thread has ended
[2025-11-22 17:14:52] 2025-11-22 17:14:52,026 | INFO     | all workflow threads have been joined
[2025-11-22 17:14:52] 2025-11-22 17:14:52,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 17:14:52] 2025-11-22 17:14:52,043 | INFO     | traces error code: 0
[2025-11-22 17:14:52] 2025-11-22 17:14:52,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 17:14:52] 2025-11-22 17:14:52,256 [wrapper] ==== pilot stdout END ====
[2025-11-22 17:14:52] 2025-11-22 17:14:52,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 17:14:52] 2025-11-22 17:14:52,274 [wrapper] pilotpid: 466733
[2025-11-22 17:14:52] 2025-11-22 17:14:52,281 [wrapper] Pilot exit status: 0
[2025-11-22 17:14:52] 2025-11-22 17:14:52,309 [wrapper] pandaids: 6894290667
[2025-11-22 17:14:52] 2025-11-22 17:14:52,387 [wrapper] cleanup supervisor_pilot  537010 466734
[2025-11-22 17:14:52] 2025-11-22 17:14:52,396 [wrapper] Test setup, not cleaning
[2025-11-22 17:14:52] 2025-11-22 17:14:52,404 [wrapper] apfmon messages muted
[2025-11-22 17:14:52] 2025-11-22 17:14:52,410 [wrapper] ==== wrapper stdout END ====
[2025-11-22 17:14:52] 2025-11-22 17:14:52,418 [wrapper] ==== wrapper stderr END ====
[2025-11-22 17:14:52]  *** Error codes and diagnostics ***
[2025-11-22 17:14:52]     "exeErrorCode": 0,
[2025-11-22 17:14:52]     "exeErrorDiag": "",
[2025-11-22 17:14:52]     "pilotErrorCode": 0,
[2025-11-22 17:14:52]     "pilotErrorDiag": "",
[2025-11-22 17:14:52]  *** Listing of results directory ***
[2025-11-22 17:14:52] total 1313920
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc    576529 Nov 21 11:32 pilot3.tar.gz
[2025-11-22 17:14:52] -rwx------ 1 boinc boinc     36292 Nov 21 11:46 runpilot2-wrapper.sh
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc      5112 Nov 21 11:46 queuedata.json
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc       100 Nov 22 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 17:14:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 07:23 run_atlas
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc       105 Nov 22 07:23 job.xml
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc      6315 Nov 22 07:23 init_data.xml
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc 410152426 Nov 22 07:23 EVNT.47493127._002428.pool.root.1
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc     15847 Nov 22 07:23 start_atlas.sh
[2025-11-22 17:14:52] drwxrwx--x 2 boinc boinc      4096 Nov 22 07:23 shared
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc    590105 Nov 22 07:23 input.tar.gz
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc         0 Nov 22 07:23 boinc_lockfile
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc      2785 Nov 22 07:23 pandaJob.out
[2025-11-22 17:14:52] -rw------- 1 boinc boinc    989752 Nov 22 07:23 agis_schedconf.cvmfs.json
[2025-11-22 17:14:52] drwx------ 5 boinc boinc      4096 Nov 22 07:23 pilot3
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc       532 Nov 22 16:58 boinc_task_state.xml
[2025-11-22 17:14:52] -rw------- 1 boinc boinc 917625729 Nov 22 17:12 HITS.47533967._003999.pool.root.1
[2025-11-22 17:14:52] -rw------- 1 boinc boinc      1031 Nov 22 17:13 memory_monitor_summary.json
[2025-11-22 17:14:52] -rw------- 1 boinc boinc   1526164 Nov 22 17:13 agis_ddmendpoints.agis.ALL.json
[2025-11-22 17:14:52] -rw------- 1 boinc boinc   1858046 Nov 22 17:13 log.47533967._003999.job.log.tgz.1
[2025-11-22 17:14:52] -rw------- 1 boinc boinc        95 Nov 22 17:13 pilot_heartbeat.json
[2025-11-22 17:14:52] -rw------- 1 boinc boinc      8584 Nov 22 17:13 heartbeat.json
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc        29 Nov 22 17:14 wrapper_checkpoint.txt
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc      8192 Nov 22 17:14 boinc_mmap_file
[2025-11-22 17:14:52] -rw------- 1 boinc boinc      5002 Nov 22 17:14 pilotlog.txt
[2025-11-22 17:14:52] -rw------- 1 boinc boinc   5019372 Nov 22 17:14 log.47533967._003999.job.log.1
[2025-11-22 17:14:52] -rw------- 1 boinc boinc       353 Nov 22 17:14 output.list
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc       620 Nov 22 17:14 runtime_log
[2025-11-22 17:14:52] -rw------- 1 boinc boinc   6901760 Nov 22 17:14 result.tar.gz
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc      8904 Nov 22 17:14 runtime_log.err
[2025-11-22 17:14:52] -rw------- 1 boinc boinc       656 Nov 22 17:14 RrYNDmcleg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSNJKDmZ2eqNn.diag
[2025-11-22 17:14:52] -rw-r--r-- 1 boinc boinc     21761 Nov 22 17:14 stderr.txt
[2025-11-22 17:14:52] HITS file was successfully produced:
[2025-11-22 17:14:52] -rw------- 1 boinc boinc 917625729 Nov 22 17:12 shared/HITS.pool.root.1
[2025-11-22 17:14:52]  *** Contents of shared directory: ***
[2025-11-22 17:14:52] total 1304000
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc 410152426 Nov 22 07:23 ATLAS.root_0
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc     15847 Nov 22 07:23 start_atlas.sh
[2025-11-22 17:14:52] -rw-r--r-- 2 boinc boinc    590105 Nov 22 07:23 input.tar.gz
[2025-11-22 17:14:52] -rw------- 1 boinc boinc 917625729 Nov 22 17:12 HITS.pool.root.1
[2025-11-22 17:14:52] -rw------- 1 boinc boinc   6901760 Nov 22 17:14 result.tar.gz
17:14:54 (463006): run_atlas exited; CPU time 268159.157966
17:14:54 (463006): called boinc_finish(0)

</stderr_txt>
]]>

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