Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
16:42:26 (39812): wrapper (7.7.26015): starting
16:42:26 (39812): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 16:42:26] Arguments: --nthreads 12
[2025-11-22 16:42:26] Threads: 12
[2025-11-22 16:42:26] Checking for CVMFS
[2025-11-22 16:42:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 16:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 16:42:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 16:42:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 16:42:28] 2.13.3.0 3274 13 42048 153185 2 90 2138132 4096001 1896 130560 0 118293 99.984 2825 1901 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 16:42:28] CVMFS is ok
[2025-11-22 16:42:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 16:42:28] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 16:42:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 16:42:28] Further information can be found at the LHC@home message board.
[2025-11-22 16:42:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 16:42:28] Checking for apptainer binary...
[2025-11-22 16:42:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 16:42:28] Running /usr/bin/apptainer --version
[2025-11-22 16:42:28] apptainer version 1.4.4
[2025-11-22 16:42:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 16:42:28] zhiwei-Z790-Riptide-WiFi
[2025-11-22 16:42:28] apptainer works
[2025-11-22 16:42:28] Set ATHENA_PROC_NUMBER=12
[2025-11-22 16:42:28] Set ATHENA_CORE_NUMBER=12
[2025-11-22 16:42:29] Starting ATLAS job with PandaID=6894289829
[2025-11-22 16:42:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:23:27]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:23:27] 2025-11-23 01:22:55,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,136 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 20:23:27] 2025-11-23 01:22:56,138 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 4099.7960625000005
[2025-11-22 20:23:27] 2025-11-23 01:22:56,140 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6894289829/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,140 | INFO     | extracted standard info from prmon json
[2025-11-22 20:23:27] 2025-11-23 01:22:56,140 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:23:27] 2025-11-23 01:22:56,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | sum of square deviations: 3168468710.9953957
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | sum of deviations: 109633560548.86633
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | mean x: 1763854372.0046084
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | mean y: 3395314.133640553
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | intersect: -61028495081.84219
[2025-11-22 20:23:27] 2025-11-23 01:22:56,142 | INFO     | chi2: 4.5590409210972735
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | sum of square deviations: 2954455700.9952765
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | sum of deviations: 178416463058.5141
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | mean x: 1763854219.5047169
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | mean y: 3444038.9858490564
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | intersect: -106513851545.73161
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | chi2: 1.9878176755457553
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | current chi2=1.9878176755457553 (change=56.39833662499073 %)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,143 | INFO     | sum of square deviations: 2750303340.9951744
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | sum of deviations: 169876307273.71017
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | mean x: 1763854067.0048308
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | mean y: 3437655.2898550723
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | intersect: -108943459585.53409
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | chi2: 1.9868050333786862
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | current chi2=1.9868050333786862 (change=0.05094240681762063 %)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | right removable region: 206
[2025-11-22 20:23:27] 2025-11-23 01:22:56,144 | INFO     | sum of square deviations: 2954455090.9952765
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | sum of deviations: 48304917856.22644
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | mean x: 1763854524.5047169
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | mean y: 3438692.7735849055
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | intersect: -28835330316.17796
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | chi2: 2.670771018321769
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | current chi2=2.670771018321769 (change=41.41813893438434 %)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | sum of square deviations: 2750302120.9951744
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | sum of deviations: 35469091983.386475
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | mean x: 1763854677.0048308
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | mean y: 3448267.61352657
[2025-11-22 20:23:27] 2025-11-23 01:22:56,145 | INFO     | intersect: -22743988570.843014
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | chi2: 2.6485642397719893
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | current chi2=2.6485642397719893 (change=0.8314744467960412 %)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | left removable region: 20
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | sum of square deviations: 1995290816.4946144
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | sum of deviations: 76379497246.53763
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | mean x: 1763854646.5053763
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | mean y: 3511105.9623655914
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | intersect: -67516636835.54631
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | chi2: 0.01169665715893692
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | current memory leak: 38.28 B/s (using 186 data points, chi2=0.01)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,146 | INFO     | could have reported an average CPU frequency of 4218 MHz (11 samples)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | ..............................
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . Timing measurements:
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . get job = 0 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . initial setup = 2 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . payload setup = 4 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . stage-in = 0 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . payload execution = 13187 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . stage-out = 2 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | . log creation = 0 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,147 | INFO     | ..............................
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | 
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | job summary report
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | --------------------------------------------------
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | PanDA job id: 6894289829
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | task id: 47533967
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | errors: (none)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | pilot state: finished 
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | transexitcode: 0
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | exeerrorcode: 0
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | exeerrordiag: 
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | exitcode: 0
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | exitmsg: OK
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | cpuconsumptiontime: 117135 s
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | nevents: 1000
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | neventsw: 0
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | pid: 50670
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | pgrp: 50670
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | corecount: 12
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | event service: False
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | sizes: {0: 2298756, 4: 2299018, 11: 2299046, 13196: 2330338, 13198: 2339388, 13201: 2339578}
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | --------------------------------------------------
[2025-11-22 20:23:27] 2025-11-23 01:22:56,179 | INFO     | 
[2025-11-22 20:23:27] 2025-11-23 01:22:56,180 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | job 6894289829 has completed (purged errors)
[2025-11-22 20:23:27] 2025-11-23 01:22:56,191 | INFO     | overall cleanup function is called
[2025-11-22 20:23:27] 2025-11-23 01:22:57,199 | INFO     | --- collectZombieJob: --- 10, [50670]
[2025-11-22 20:23:27] 2025-11-23 01:22:57,199 | INFO     | zombie collector waiting for pid 50670
[2025-11-22 20:23:27] 2025-11-23 01:22:57,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:23:27] 2025-11-23 01:22:57,199 | INFO     | collected zombie processes
[2025-11-22 20:23:27] 2025-11-23 01:22:57,199 | INFO     | will attempt to kill all subprocesses of pid=50670
[2025-11-22 20:23:27] 2025-11-23 01:22:57,271 | INFO     | process IDs to be killed: [50670] (in reverse order)
[2025-11-22 20:23:27] 2025-11-23 01:22:57,300 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:23:27] 2025-11-23 01:22:57,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:23:27] 2025-11-23 01:22:57,303 | INFO     | did not find any defunct processes belonging to 50670
[2025-11-22 20:23:27] 2025-11-23 01:22:57,305 | INFO     | did not find any defunct processes belonging to 50670
[2025-11-22 20:23:27] 2025-11-23 01:22:57,306 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:23:27] 2025-11-23 01:22:57,306 | INFO     | ready for new job
[2025-11-22 20:23:27] 2025-11-23 01:22:57,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:23:27] 2025-11-23 01:22:57,307 | INFO     | ***************************************
[2025-11-22 20:23:27] 2025-11-23 01:22:57,307 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:23:27] 2025-11-23 01:22:57,307 | INFO     | ***************************************
[2025-11-22 20:23:27] 2025-11-23 01:22:57,307 | INFO     | 
[2025-11-22 20:23:27] 2025-11-23 01:22:57,308 | INFO     | architecture information:
[2025-11-22 20:23:27] 2025-11-23 01:22:57,308 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:23:27] 2025-11-23 01:22:57,316 | INFO     | cat /etc/os-release:
[2025-11-22 20:23:27] NAME="CentOS Linux"
[2025-11-22 20:23:27] VERSION="7 (Core)"
[2025-11-22 20:23:27] ID="centos"
[2025-11-22 20:23:27] ID_LIKE="rhel fedora"
[2025-11-22 20:23:27] VERSION_ID="7"
[2025-11-22 20:23:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:23:27] ANSI_COLOR="0;31"
[2025-11-22 20:23:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:23:27] HOME_URL="https://www.centos.org/"
[2025-11-22 20:23:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:23:27] 
[2025-11-22 20:23:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:23:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:23:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:23:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:23:27] 
[2025-11-22 20:23:27] 2025-11-23 01:22:57,316 | INFO     | ***************************************
[2025-11-22 20:23:27] 2025-11-23 01:22:57,819 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | INFO     | sufficient remaining disk space (1817817645056 B)
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | INFO     | update_server=False
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:23:27] 2025-11-23 01:22:57,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:23:27] 2025-11-23 01:22:57,861 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 20:23:27] 2025-11-23 01:22:57,861 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 20:23:27] 2025-11-23 01:22:57,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:23:27] 2025-11-23 01:22:57,861 | INFO     | will abort loop
[2025-11-22 20:23:27] 2025-11-23 01:22:58,192 | INFO     | all payload control threads have been joined
[2025-11-22 20:23:27] 2025-11-23 01:22:58,569 | INFO     | all data control threads have been joined
[2025-11-22 20:23:27] 2025-11-23 01:22:58,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:23:27] 2025-11-23 01:22:58,830 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:58,830 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:58,866 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,096 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,134 | INFO     | [job] validate thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,151 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,197 | INFO     | [payload] control thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:23:27] 2025-11-23 01:22:59,448 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,462 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,486 | INFO     | all job control threads have been joined
[2025-11-22 20:23:27] 2025-11-23 01:22:59,574 | INFO     | [data] control thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,927 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:22:59,982 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:23:00,491 | INFO     | [job] control thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:23:00,700 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:23:02,259 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:23:27] 2025-11-23 01:23:03,216 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:23:08,866 | INFO     | job.realtimelogging is not enabled
[2025-11-22 20:23:27] 2025-11-23 01:23:09,871 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:23:27] 2025-11-23 01:23:10,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124078715619136)>', '<ExcThread(monitor, started 124078232950528)>']
[2025-11-22 20:23:27] 2025-11-23 01:23:15,758 | INFO     | all workflow threads have been joined
[2025-11-22 20:23:27] 2025-11-23 01:23:15,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:23:27] 2025-11-23 01:23:15,758 | INFO     | traces error code: 0
[2025-11-22 20:23:27] 2025-11-23 01:23:15,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:23:27] 2025-11-23 01:23:27,787 | INFO     | PID=44008 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 20:23:27] 2025-11-23 01:23:27,788 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:23:27] 2025-11-23 01:23:27,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:23:27] 2025-11-23 01:23:27,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:23:27] 2025-11-23 01:23:27,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:23:27] 2025-11-23 01:23:27,788 | INFO     | [monitor] control thread has ended
[2025-11-22 20:23:27] 2025-11-23 01:23:27,847 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:23:27] 2025-11-23 01:23:27,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:23:27] 2025-11-23 01:23:27,849 [wrapper] pilotpid: 44008
[2025-11-22 20:23:27] 2025-11-23 01:23:27,851 [wrapper] Pilot exit status: 0
[2025-11-22 20:23:27] 2025-11-23 01:23:27,855 [wrapper] pandaids: 6894289829
[2025-11-22 20:23:27] 2025-11-23 01:23:27,872 [wrapper] cleanup supervisor_pilot   78199 44009
[2025-11-22 20:23:27] 2025-11-23 01:23:27,874 [wrapper] Test setup, not cleaning
[2025-11-22 20:23:27] 2025-11-23 01:23:27,876 [wrapper] apfmon messages muted
[2025-11-22 20:23:27] 2025-11-23 01:23:27,876 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:23:27] 2025-11-23 01:23:27,877 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:23:27]  *** Error codes and diagnostics ***
[2025-11-22 20:23:27]     "exeErrorCode": 0,
[2025-11-22 20:23:27]     "exeErrorDiag": "",
[2025-11-22 20:23:27]     "pilotErrorCode": 0,
[2025-11-22 20:23:27]     "pilotErrorDiag": "",
[2025-11-22 20:23:27]  *** Listing of results directory ***
[2025-11-22 20:23:27] total 1294004
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:32 pilot3.tar.gz
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:34 queuedata.json
[2025-11-22 20:23:27] -rwx------ 1 boinc boinc     36292 Nov 21 06:36 runpilot2-wrapper.sh
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc       100 Nov 22 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:23:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 16:42 run_atlas
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc       105 Nov 22 16:42 job.xml
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc 409698831 Nov 22 16:42 EVNT.47493127._002418.pool.root.1
[2025-11-22 20:23:27] drwxrwx--x 2 boinc boinc      4096 Nov 22 16:42 shared
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc    590107 Nov 22 16:42 input.tar.gz
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc     15847 Nov 22 16:42 start_atlas.sh
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc         0 Nov 22 16:42 boinc_setup_complete
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc      8826 Nov 22 16:42 init_data.xml
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc         0 Nov 22 16:42 boinc_lockfile
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc      2785 Nov 22 16:42 pandaJob.out
[2025-11-22 20:23:27] -rw------- 1 boinc boinc    989768 Nov 22 16:42 agis_schedconf.cvmfs.json
[2025-11-22 20:23:27] drwx------ 5 boinc boinc      4096 Nov 22 16:42 pilot3
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc       533 Nov 22 20:18 boinc_task_state.xml
[2025-11-22 20:23:27] -rw------- 1 boinc boinc 903777780 Nov 22 20:22 HITS.47533967._003893.pool.root.1
[2025-11-22 20:23:27] -rw------- 1 boinc boinc        95 Nov 22 20:22 pilot_heartbeat.json
[2025-11-22 20:23:27] -rw------- 1 boinc boinc      1037 Nov 22 20:22 memory_monitor_summary.json
[2025-11-22 20:23:27] -rw------- 1 boinc boinc   1526164 Nov 22 20:22 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:23:27] -rw------- 1 boinc boinc   1953432 Nov 22 20:22 log.47533967._003893.job.log.tgz.1
[2025-11-22 20:23:27] -rw------- 1 boinc boinc      8617 Nov 22 20:22 heartbeat.json
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc      8192 Nov 22 20:23 boinc_mmap_file
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc        29 Nov 22 20:23 wrapper_checkpoint.txt
[2025-11-22 20:23:27] -rw------- 1 boinc boinc       745 Nov 22 20:23 pilotlog.txt
[2025-11-22 20:23:27] -rw------- 1 boinc boinc   1877597 Nov 22 20:23 log.47533967._003893.job.log.1
[2025-11-22 20:23:27] -rw------- 1 boinc boinc       353 Nov 22 20:23 output.list
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc       620 Nov 22 20:23 runtime_log
[2025-11-22 20:23:27] -rw------- 1 boinc boinc   3850240 Nov 22 20:23 result.tar.gz
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc      8856 Nov 22 20:23 runtime_log.err
[2025-11-22 20:23:27] -rw------- 1 boinc boinc       670 Nov 22 20:23 eJ7LDmjceg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMMJKDmtAliim.diag
[2025-11-22 20:23:27] -rw-r--r-- 1 boinc boinc     21342 Nov 22 20:23 stderr.txt
[2025-11-22 20:23:27] HITS file was successfully produced:
[2025-11-22 20:23:27] -rw------- 1 boinc boinc 903777780 Nov 22 20:22 shared/HITS.pool.root.1
[2025-11-22 20:23:27]  *** Contents of shared directory: ***
[2025-11-22 20:23:27] total 1287060
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc 409698831 Nov 22 16:42 ATLAS.root_0
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc    590107 Nov 22 16:42 input.tar.gz
[2025-11-22 20:23:27] -rw-r--r-- 2 boinc boinc     15847 Nov 22 16:42 start_atlas.sh
[2025-11-22 20:23:27] -rw------- 1 boinc boinc 903777780 Nov 22 20:22 HITS.pool.root.1
[2025-11-22 20:23:27] -rw------- 1 boinc boinc   3850240 Nov 22 20:23 result.tar.gz
20:23:29 (39812): run_atlas exited; CPU time 117092.452464
20:23:29 (39812): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN