Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 07:49:54 (11340): vboxwrapper version 26210
2025-11-22 07:49:54 (11340): BOINC client version: 8.0.2
2025-11-22 07:49:56 (11340): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-22 07:49:56 (11340): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 07:49:56 (11340): Create VM. (boinc_121749818f78002d, slot#0)
2025-11-22 07:49:57 (11340): Setting Memory Size for VM. (4600MB)
2025-11-22 07:49:57 (11340): Setting CPU Count for VM. (6)
2025-11-22 07:49:57 (11340): Setting Chipset Options for VM.
2025-11-22 07:49:57 (11340): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 07:49:58 (11340): Setting Boot Options for VM.
2025-11-22 07:49:58 (11340): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 07:49:59 (11340): Enabling VM Network Access.
2025-11-22 07:49:59 (11340): Disabling USB Support for VM.
2025-11-22 07:49:59 (11340): Disabling COM Port Support for VM.
2025-11-22 07:49:59 (11340): Disabling LPT Port Support for VM.
2025-11-22 07:50:00 (11340): Disabling Audio Support for VM.
2025-11-22 07:50:00 (11340): Disabling Clipboard Support for VM.
2025-11-22 07:50:00 (11340): Disabling Drag and Drop Support for VM.
2025-11-22 07:50:00 (11340): Adding storage controller(s) to VM.
2025-11-22 07:50:01 (11340): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 07:50:03 (11340): Adding VirtualBox Guest Additions to VM.
2025-11-22 07:50:03 (11340): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 07:50:04 (11340): forwarding host port 52645 to guest port 80
2025-11-22 07:50:04 (11340): Enabling remote desktop for VM.
2025-11-22 07:50:04 (11340): Required extension pack not installed, remote desktop not enabled.
2025-11-22 07:50:04 (11340): Enabling shared directory for VM.
2025-11-22 07:50:05 (11340): Starting VM using VBoxManage interface. (boinc_121749818f78002d, slot#0)
2025-11-22 07:50:12 (11340): Successfully started VM. (PID = '9940')
2025-11-22 07:50:12 (11340): Reporting VM Process ID to BOINC.
2025-11-22 07:50:12 (11340): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-22 07:50:12 (11340): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 07:50:12 (11340): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 07:50:12 (11340): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 07:50:12 (11340): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 07:50:12 (11340): Detected: Web Application Enabled (http://localhost:52645)
2025-11-22 07:50:12 (11340): Preference change detected
2025-11-22 07:50:12 (11340): Setting CPU throttle for VM. (90%)
2025-11-22 07:50:13 (11340): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 07:50:14 (11340): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 07:50:14 (11340): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 07:50:17 (11340): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 07:50:17 (11340): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 07:50:17 (11340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 07:50:33 (11340): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 07:50:33 (11340): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 07:50:42 (11340): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000200 main     Log opened 2025-11-22T07:50:39.725534000Z
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000319 main     OS Product: Linux
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000355 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000414 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000450 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000451 main     Process ID: 1336
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.000451 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 07:50:42 (11340): Guest Log: 00:00:00.001336 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 07:50:42 (11340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 07:50:42 (11340): Guest Log: [INFO] Mounting shared directory
2025-11-22 07:50:42 (11340): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 07:50:50 (11340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 07:50:50 (11340): Guest Log: [INFO] Detected branch: prod
2025-11-22 07:50:50 (11340): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 07:50:50 (11340): Guest Log: Copying input files
2025-11-22 07:50:51 (11340): Guest Log: 00:00:10.003622 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 603 503 232 000ns (GuestNow=1 763 794 236 225 318 000 ns GuestLast=1 763 797 839 728 550 000 ns fSetTimeLastLoop=true )
2025-11-22 07:50:53 (11340): Guest Log: Copied input files into RunAtlas.
2025-11-22 07:50:53 (11340): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 07:50:53 (11340): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 07:50:53 (11340): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 07:50:53 (11340): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 07:51:04 (11340): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 07:51:05 (11340): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 07:51:05 (11340): Guest Log: 2.6.3.0 1616 0 32208 153162 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 07:51:10 (11340): Guest Log: copied the webapp to /var/www
2025-11-22 07:51:10 (11340): Guest Log: ATHENA_PROC_NUMBER=6
2025-11-22 07:51:10 (11340): Guest Log: ATHENA_CORE_NUMBER=6
2025-11-22 07:51:10 (11340): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 07:51:10 (11340): Guest Log:  *** Starting ATLAS job. (PandaID=6894289851 taskID=47533967) ***
2025-11-22 09:38:29 (11340): Status Report: Elapsed Time: '6000.415594'
2025-11-22 09:38:29 (11340): Status Report: CPU Time: '30996.296875'
2025-11-22 11:28:02 (11340): Status Report: Elapsed Time: '12000.784630'
2025-11-22 11:28:02 (11340): Status Report: CPU Time: '66215.531250'
2025-11-22 13:17:27 (11340): Status Report: Elapsed Time: '18000.784630'
2025-11-22 13:17:28 (11340): Status Report: CPU Time: '101403.562500'
2025-11-22 15:07:31 (11340): Status Report: Elapsed Time: '24000.877542'
2025-11-22 15:07:31 (11340): Status Report: CPU Time: '136789.578125'
2025-11-22 16:57:33 (11340): Status Report: Elapsed Time: '30001.514175'
2025-11-22 16:57:34 (11340): Status Report: CPU Time: '172174.812500'
2025-11-22 18:47:17 (11340): Status Report: Elapsed Time: '36001.979834'
2025-11-22 18:47:17 (11340): Status Report: CPU Time: '207446.171875'
2025-11-22 20:37:07 (11340): Status Report: Elapsed Time: '42002.463245'
2025-11-22 20:37:07 (11340): Status Report: CPU Time: '242761.734375'
2025-11-22 22:26:55 (11340): Status Report: Elapsed Time: '48002.463245'
2025-11-22 22:26:55 (11340): Status Report: CPU Time: '278069.328125'
2025-11-23 00:16:16 (11340): Status Report: Elapsed Time: '54003.380527'
2025-11-23 00:16:16 (11340): Status Report: CPU Time: '313220.140625'
2025-11-23 02:05:08 (11340): Status Report: Elapsed Time: '60004.379555'
2025-11-23 02:05:08 (11340): Status Report: CPU Time: '348259.250000'
2025-11-23 02:20:59 (11340): Guest Log:  *** Job finished ***
2025-11-23 02:20:59 (11340): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:02,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:02,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:26,819 | INFO     | [monitor] cgroup control has ended
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:28,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588251944768)>', '<ExcThread(monitor, started 140587802015488)>']
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:29,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:29,170 | INFO     | [monitor] control thread has ended
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,088 | INFO     | all workflow threads have been joined
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,088 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,088 | INFO     | traces error code: 0
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,226 [wrapper] ==== pilot stdout END ====
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,235 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,243 [wrapper] pilotpid: 6044
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,250 [wrapper] Pilot exit status: 0
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,279 [wrapper] pandaids: 6894289851
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,326 [wrapper] cleanup supervisor_pilot 31228 6045
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,335 [wrapper] Test setup, not cleaning
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,344 [wrapper] apfmon messages muted
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,352 [wrapper] ==== wrapper stdout END ====
2025-11-23 02:20:59 (11340): Guest Log: 2025-11-23 01:20:33,362 [wrapper] ==== wrapper stderr END ====
2025-11-23 02:20:59 (11340): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 02:20:59 (11340): Guest Log:     "exeErrorCode": 0,
2025-11-23 02:20:59 (11340): Guest Log:     "exeErrorDiag": "",
2025-11-23 02:20:59 (11340): Guest Log:     "pilotErrorCode": 0,
2025-11-23 02:20:59 (11340): Guest Log:     "pilotErrorDiag": "",
2025-11-23 02:20:59 (11340): Guest Log:  *** Listing of results directory ***
2025-11-23 02:20:59 (11340): Guest Log: total 905816
2025-11-23 02:20:59 (11340): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 11:32 pilot3.tar.gz
2025-11-23 02:20:59 (11340): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 11:42 queuedata.json
2025-11-23 02:20:59 (11340): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 11:43 runpilot2-wrapper.sh
2025-11-23 02:20:59 (11340): Guest Log: -rwxr-xr-x. 1 atlas atlas      8927 Nov 22 06:50 init_data.xml
2025-11-23 02:20:59 (11340): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 22 06:50 start_atlas.sh
2025-11-23 02:20:59 (11340): Guest Log: -rwxr-xr-x. 1 atlas atlas    590108 Nov 22 06:50 input.tar.gz
2025-11-23 02:20:59 (11340): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 06:50 EVNT.47493127._002420.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 02:20:59 (11340): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 22 06:50 pandaJob.out
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas    989752 Nov 22 06:52 agis_schedconf.cvmfs.json
2025-11-23 02:20:59 (11340): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 06:52 pilot3
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas 902441998 Nov 23 01:18 HITS.47533967._003915.pool.root.1
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 23 01:19 memory_monitor_summary.json
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 01:19 agis_ddmendpoints.agis.ALL.json
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas   1994858 Nov 23 01:19 log.47533967._003915.job.log.tgz.1
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas      8635 Nov 23 01:19 heartbeat.json
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 01:20 pilot_heartbeat.json
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas      4921 Nov 23 01:20 pilotlog.txt
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas   8636593 Nov 23 01:20 log.47533967._003915.job.log.1
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 01:20 output.list
2025-11-23 02:20:59 (11340): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 01:20 runtime_log
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas  10649600 Nov 23 01:20 result.tar.gz
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas       668 Nov 23 01:20 tYmLDmjieg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDaHKDmdy4K5m.diag
2025-11-23 02:20:59 (11340): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Nov 23 01:20 runtime_log.err
2025-11-23 02:20:59 (11340): Guest Log: Looking for outputfile HITS.47533967._003915.pool.root.1
2025-11-23 02:20:59 (11340): Guest Log: HITS file was successfully produced
2025-11-23 02:20:59 (11340): Guest Log: -rw-------. 1 atlas atlas 902441998 Nov 23 01:18 /home/atlas/RunAtlas/HITS.47533967._003915.pool.root.1
2025-11-23 02:21:05 (11340): Guest Log: Successfully finished the ATLAS job!
2025-11-23 02:21:05 (11340): Guest Log: Copying the results back to the shared directory!
2025-11-23 02:21:06 (11340): Guest Log:  *** Contents of shared directory: ***
2025-11-23 02:21:06 (11340): Guest Log: total 1290592
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root 407849584 Nov 22 06:49 ATLAS.root_0
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root 902441998 Nov 23  2025 HITS.pool.root.1
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root      8927 Nov 22 06:49 init_data.xml
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root    590108 Nov 22 06:49 input.tar.gz
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root  10649600 Nov 23  2025 result.tar.gz
2025-11-23 02:21:06 (11340): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 22 06:49 start_atlas.sh
2025-11-23 02:21:06 (11340): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 02:21:08 (11340): VM Completion File Detected.
2025-11-23 02:21:08 (11340): Powering off VM.
2025-11-23 02:21:10 (11340): Successfully stopped VM.
2025-11-23 02:21:10 (11340): Deregistering VM. (boinc_121749818f78002d, slot#0)
2025-11-23 02:21:10 (11340): Removing network bandwidth throttle group from VM.
2025-11-23 02:21:10 (11340): Removing VM from VirtualBox.
2025-11-23 02:21:15 (11340): called boinc_finish(0)

</stderr_txt>
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