Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:13:04 (8446): wrapper (7.7.26015): starting
02:13:04 (8446): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 02:13:04] Arguments: --nthreads 12
[2025-11-22 02:13:04] Threads: 12
[2025-11-22 02:13:04] Checking for CVMFS
[2025-11-22 02:13:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 02:13:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 02:13:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 02:13:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 02:13:04] 2.11.2.0 2998 281560 98160 153163 0 80 10394479 20275200 1 130560 1 126917306 99.967 16694143 14400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 02:13:04] CVMFS is ok
[2025-11-22 02:13:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 02:13:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 02:13:04] Further information can be found at the LHC@home message board.
[2025-11-22 02:13:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 02:13:04] Checking for apptainer binary...
[2025-11-22 02:13:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 02:13:05] Running /usr/bin/apptainer --version
[2025-11-22 02:13:05] apptainer version 1.3.2-1.el7
[2025-11-22 02:13:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 02:13:06] c-205-25.aglt2.org
[2025-11-22 02:13:06] apptainer works
[2025-11-22 02:13:06] Set ATHENA_PROC_NUMBER=12
[2025-11-22 02:13:06] Set ATHENA_CORE_NUMBER=12
[2025-11-22 02:13:06] Starting ATLAS job with PandaID=6894289830
[2025-11-22 02:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 09:27:09]  *** The last 200 lines of the pilot log: ***
[2025-11-22 09:27:09] 2025-11-22 14:26:31,681 | INFO     | monitor loop #1944: job 0:6894289830 is in state 'finished'
[2025-11-22 09:27:09] 2025-11-22 14:26:31,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 09:27:09] 2025-11-22 14:26:32,475 | INFO     | time since job start (25991s) is within the limit (172800.0s)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,596 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 09:27:09] 2025-11-22 14:26:33,601 | INFO     | PID=12245 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 09:27:09] 2025-11-22 14:26:33,601 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1795.6666666666667
[2025-11-22 09:27:09] 2025-11-22 14:26:33,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894289830/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,605 | INFO     | extracted standard info from prmon json
[2025-11-22 09:27:09] 2025-11-22 14:26:33,605 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 09:27:09] 2025-11-22 14:26:33,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 09:27:09] 2025-11-22 14:26:33,612 | INFO     | fitting pss+swap vs Time
[2025-11-22 09:27:09] 2025-11-22 14:26:33,613 | INFO     | sum of square deviations: 23972143262.10326
[2025-11-22 09:27:09] 2025-11-22 14:26:33,617 | INFO     | sum of deviations: 378584403133.2445
[2025-11-22 09:27:09] 2025-11-22 14:26:33,617 | INFO     | mean x: 1763808592.8638499
[2025-11-22 09:27:09] 2025-11-22 14:26:33,617 | INFO     | mean y: 3410837.3145539905
[2025-11-22 09:27:09] 2025-11-22 14:26:33,617 | INFO     | intersect: -27851855004.779434
[2025-11-22 09:27:09] 2025-11-22 14:26:33,618 | INFO     | chi2: 6.865649073190866
[2025-11-22 09:27:09] 2025-11-22 14:26:33,618 | INFO     | sum of square deviations: 23137970243.933445
[2025-11-22 09:27:09] 2025-11-22 14:26:33,622 | INFO     | sum of deviations: 553754900764.4016
[2025-11-22 09:27:09] 2025-11-22 14:26:33,622 | INFO     | mean x: 1763808440.368171
[2025-11-22 09:27:09] 2025-11-22 14:26:33,622 | INFO     | mean y: 3442834.3135391925
[2025-11-22 09:27:09] 2025-11-22 14:26:33,622 | INFO     | intersect: -42209316433.95359
[2025-11-22 09:27:09] 2025-11-22 14:26:33,623 | INFO     | chi2: 3.381654470659126
[2025-11-22 09:27:09] 2025-11-22 14:26:33,623 | INFO     | current chi2=3.381654470659126 (change=50.745305584232625 %)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,624 | INFO     | sum of square deviations: 22323378988.247673
[2025-11-22 09:27:09] 2025-11-22 14:26:33,627 | INFO     | sum of deviations: 619611006156.2264
[2025-11-22 09:27:09] 2025-11-22 14:26:33,627 | INFO     | mean x: 1763808287.8725963
[2025-11-22 09:27:09] 2025-11-22 14:26:33,627 | INFO     | mean y: 3455131.4759615385
[2025-11-22 09:27:09] 2025-11-22 14:26:33,628 | INFO     | intersect: -48953068363.053406
[2025-11-22 09:27:09] 2025-11-22 14:26:33,628 | INFO     | chi2: 2.6919077503065174
[2025-11-22 09:27:09] 2025-11-22 14:26:33,628 | INFO     | current chi2=2.6919077503065174 (change=20.396723743871103 %)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,628 | INFO     | right removable region: 415
[2025-11-22 09:27:09] 2025-11-22 14:26:33,629 | INFO     | sum of square deviations: 23137901435.66755
[2025-11-22 09:27:09] 2025-11-22 14:26:33,632 | INFO     | sum of deviations: 231116230828.26114
[2025-11-22 09:27:09] 2025-11-22 14:26:33,633 | INFO     | mean x: 1763808745.3657956
[2025-11-22 09:27:09] 2025-11-22 14:26:33,633 | INFO     | mean y: 3437724.7125890735
[2025-11-22 09:27:09] 2025-11-22 14:26:33,633 | INFO     | intersect: -17614617666.537113
[2025-11-22 09:27:09] 2025-11-22 14:26:33,633 | INFO     | chi2: 4.417234917427238
[2025-11-22 09:27:09] 2025-11-22 14:26:33,633 | INFO     | current chi2=4.417234917427238 (change=35.66180166889462 %)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,634 | INFO     | sum of square deviations: 22323215934.990467
[2025-11-22 09:27:09] 2025-11-22 14:26:33,638 | INFO     | sum of deviations: 190520925112.14386
[2025-11-22 09:27:09] 2025-11-22 14:26:33,638 | INFO     | mean x: 1763808897.8701923
[2025-11-22 09:27:09] 2025-11-22 14:26:33,638 | INFO     | mean y: 3445316.4471153845
[2025-11-22 09:27:09] 2025-11-22 14:26:33,638 | INFO     | intersect: -15050053423.245266
[2025-11-22 09:27:09] 2025-11-22 14:26:33,638 | INFO     | chi2: 4.319948926182988
[2025-11-22 09:27:09] 2025-11-22 14:26:33,639 | INFO     | current chi2=4.319948926182988 (change=2.202418324197089 %)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,639 | INFO     | left removable region: 20
[2025-11-22 09:27:09] 2025-11-22 14:26:33,639 | INFO     | sum of square deviations: 19110427061.037926
[2025-11-22 09:27:09] 2025-11-22 14:26:33,642 | INFO     | sum of deviations: 375343016865.20294
[2025-11-22 09:27:09] 2025-11-22 14:26:33,643 | INFO     | mean x: 1763808867.379747
[2025-11-22 09:27:09] 2025-11-22 14:26:33,643 | INFO     | mean y: 3502741.025316456
[2025-11-22 09:27:09] 2025-11-22 14:26:33,643 | INFO     | intersect: -34639016724.46875
[2025-11-22 09:27:09] 2025-11-22 14:26:33,643 | INFO     | chi2: 0.05396455312284595
[2025-11-22 09:27:09] 2025-11-22 14:26:33,643 | INFO     | current memory leak: 19.64 B/s (using 395 data points, chi2=0.05)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | could have reported an average CPU frequency of 2411 MHz (18 samples)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | ..............................
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | . Timing measurements:
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | . get job = 0 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | . initial setup = 2 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,644 | INFO     | . payload setup = 7 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,645 | INFO     | . stage-in = 0 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,645 | INFO     | . payload execution = 25952 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,645 | INFO     | . stage-out = 3 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,645 | INFO     | . log creation = 0 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,645 | INFO     | ..............................
[2025-11-22 09:27:09] 2025-11-22 14:26:33,735 | INFO     | 
[2025-11-22 09:27:09] 2025-11-22 14:26:33,735 | INFO     | job summary report
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | --------------------------------------------------
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | PanDA job id: 6894289830
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | task id: 47533967
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | errors: (none)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | pilot state: finished 
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | transexitcode: 0
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | exeerrorcode: 0
[2025-11-22 09:27:09] 2025-11-22 14:26:33,736 | INFO     | exeerrordiag: 
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | exitcode: 0
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | exitmsg: OK
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | cpuconsumptiontime: 297227 s
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | nevents: 1000
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | neventsw: 0
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | pid: 18626
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | pgrp: 18626
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | corecount: 12
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | event service: False
[2025-11-22 09:27:09] 2025-11-22 14:26:33,737 | INFO     | sizes: {0: 2298529, 1: 2298784, 6: 2299046, 12: 2299074, 25964: 2336367, 25968: 2345361, 25971: 2345545, 25977: 2345791}
[2025-11-22 09:27:09] 2025-11-22 14:26:33,738 | INFO     | --------------------------------------------------
[2025-11-22 09:27:09] 2025-11-22 14:26:33,738 | INFO     | 
[2025-11-22 09:27:09] 2025-11-22 14:26:33,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 09:27:09] 2025-11-22 14:26:33,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 09:27:09] 2025-11-22 14:26:33,763 | INFO     | job 6894289830 has completed (purged errors)
[2025-11-22 09:27:09] 2025-11-22 14:26:33,763 | INFO     | overall cleanup function is called
[2025-11-22 09:27:09] 2025-11-22 14:26:34,779 | INFO     | --- collectZombieJob: --- 10, [18626]
[2025-11-22 09:27:09] 2025-11-22 14:26:34,779 | INFO     | zombie collector waiting for pid 18626
[2025-11-22 09:27:09] 2025-11-22 14:26:34,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 09:27:09] 2025-11-22 14:26:34,779 | INFO     | collected zombie processes
[2025-11-22 09:27:09] 2025-11-22 14:26:34,779 | INFO     | will attempt to kill all subprocesses of pid=18626
[2025-11-22 09:27:09] 2025-11-22 14:26:34,872 | INFO     | process IDs to be killed: [18626] (in reverse order)
[2025-11-22 09:27:09] 2025-11-22 14:26:34,924 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 09:27:09] 2025-11-22 14:26:34,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 09:27:09] 2025-11-22 14:26:34,928 | INFO     | did not find any defunct processes belonging to 18626
[2025-11-22 09:27:09] 2025-11-22 14:26:34,931 | INFO     | did not find any defunct processes belonging to 18626
[2025-11-22 09:27:09] 2025-11-22 14:26:34,933 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 09:27:09] 2025-11-22 14:26:34,933 | INFO     | ready for new job
[2025-11-22 09:27:09] 2025-11-22 14:26:34,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 09:27:09] 2025-11-22 14:26:34,936 | INFO     | ***************************************
[2025-11-22 09:27:09] 2025-11-22 14:26:34,936 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 09:27:09] 2025-11-22 14:26:34,936 | INFO     | ***************************************
[2025-11-22 09:27:09] 2025-11-22 14:26:34,936 | INFO     | 
[2025-11-22 09:27:09] 2025-11-22 14:26:34,937 | INFO     | architecture information:
[2025-11-22 09:27:09] 2025-11-22 14:26:34,937 | INFO     | executing command: cat /etc/os-release
[2025-11-22 09:27:09] 2025-11-22 14:26:34,952 | INFO     | cat /etc/os-release:
[2025-11-22 09:27:09] NAME="CentOS Linux"
[2025-11-22 09:27:09] VERSION="7 (Core)"
[2025-11-22 09:27:09] ID="centos"
[2025-11-22 09:27:09] ID_LIKE="rhel fedora"
[2025-11-22 09:27:09] VERSION_ID="7"
[2025-11-22 09:27:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 09:27:09] ANSI_COLOR="0;31"
[2025-11-22 09:27:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 09:27:09] HOME_URL="https://www.centos.org/"
[2025-11-22 09:27:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 09:27:09] 
[2025-11-22 09:27:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 09:27:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 09:27:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 09:27:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 09:27:09] 
[2025-11-22 09:27:09] 2025-11-22 14:26:34,952 | INFO     | ***************************************
[2025-11-22 09:27:09] 2025-11-22 14:26:35,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 09:27:09] 2025-11-22 14:26:35,472 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-22 09:27:09] 2025-11-22 14:26:35,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 09:27:09] 2025-11-22 14:26:35,472 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 09:27:09] 2025-11-22 14:26:35,472 | INFO     | update_server=False
[2025-11-22 09:27:09] 2025-11-22 14:26:35,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 09:27:09] 2025-11-22 14:26:35,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:27:09] 2025-11-22 14:26:35,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:27:09] 2025-11-22 14:26:35,473 | INFO     | aborting loop
[2025-11-22 09:27:09] 2025-11-22 14:26:35,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 09:27:09] 2025-11-22 14:26:35,543 | INFO     | all job control threads have been joined
[2025-11-22 09:27:09] 2025-11-22 14:26:35,828 | INFO     | all payload control threads have been joined
[2025-11-22 09:27:09] 2025-11-22 14:26:36,455 | INFO     | all data control threads have been joined
[2025-11-22 09:27:09] 2025-11-22 14:26:36,477 | INFO     | [job] job monitor thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,478 | INFO     | [job] retrieve thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,479 | INFO     | [job] queue monitor thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,493 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,548 | INFO     | [job] control thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,834 | INFO     | [payload] control thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,852 | INFO     | [data] copytool_in thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,862 | INFO     | [payload] failed_post thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:36,880 | INFO     | [job] validate thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,100 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,369 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,461 | INFO     | [data] control thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,487 | INFO     | [data] copytool_out thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,548 | INFO     | [payload] validate_post thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:37,724 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:26:38,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 09:27:09] 2025-11-22 14:26:42,739 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 09:27:09] 2025-11-22 14:27:03,447 | INFO     | [monitor] cgroup control has ended
[2025-11-22 09:27:09] 2025-11-22 14:27:04,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674880071488)>', '<ExcThread(monitor, started 139673905112832)>']
[2025-11-22 09:27:09] 2025-11-22 14:27:05,789 | INFO     | PID=12245 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 09:27:09] 2025-11-22 14:27:05,789 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 09:27:09] 2025-11-22 14:27:05,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 09:27:09] 2025-11-22 14:27:05,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 09:27:09] 2025-11-22 14:27:05,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 09:27:09] 2025-11-22 14:27:05,790 | INFO     | [monitor] control thread has ended
[2025-11-22 09:27:09] 2025-11-22 14:27:09,578 | INFO     | all workflow threads have been joined
[2025-11-22 09:27:09] 2025-11-22 14:27:09,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 09:27:09] 2025-11-22 14:27:09,578 | INFO     | traces error code: 0
[2025-11-22 09:27:09] 2025-11-22 14:27:09,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 09:27:09] 2025-11-22 14:27:09,677 [wrapper] ==== pilot stdout END ====
[2025-11-22 09:27:09] 2025-11-22 14:27:09,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 09:27:09] 2025-11-22 14:27:09,684 [wrapper] pilotpid: 12245
[2025-11-22 09:27:09] 2025-11-22 14:27:09,688 [wrapper] Pilot exit status: 0
[2025-11-22 09:27:09] 2025-11-22 14:27:09,702 [wrapper] pandaids: 6894289830
[2025-11-22 09:27:09] 2025-11-22 14:27:09,737 [wrapper] cleanup supervisor_pilot 12088 12246
[2025-11-22 09:27:09] 2025-11-22 14:27:09,740 [wrapper] Test setup, not cleaning
[2025-11-22 09:27:09] 2025-11-22 14:27:09,744 [wrapper] apfmon messages muted
[2025-11-22 09:27:09] 2025-11-22 14:27:09,748 [wrapper] ==== wrapper stdout END ====
[2025-11-22 09:27:09] 2025-11-22 14:27:09,751 [wrapper] ==== wrapper stderr END ====
[2025-11-22 09:27:09]  *** Error codes and diagnostics ***
[2025-11-22 09:27:09]     "exeErrorCode": 0,
[2025-11-22 09:27:09]     "exeErrorDiag": "",
[2025-11-22 09:27:09]     "pilotErrorCode": 0,
[2025-11-22 09:27:09]     "pilotErrorDiag": "",
[2025-11-22 09:27:09]  *** Listing of results directory ***
[2025-11-22 09:27:09] total 1314924
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 06:32 pilot3.tar.gz
[2025-11-22 09:27:09] -rwx------ 1 boincer umatlas     36292 Nov 21 06:39 runpilot2-wrapper.sh
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 06:39 queuedata.json
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas       100 Nov 22 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 09:27:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 02:13 run_atlas
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas       105 Nov 22 02:13 job.xml
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas 409698831 Nov 22 02:13 EVNT.47493127._002418.pool.root.1
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 02:13 start_atlas.sh
[2025-11-22 09:27:09] drwxrwx--x 2 boincer umatlas      4096 Nov 22 02:13 shared
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 02:13 input.tar.gz
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas         0 Nov 22 02:13 boinc_lockfile
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 02:13 pandaJob.out
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas        57 Nov 22 02:13 setup.sh.local
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas    989752 Nov 22 02:13 agis_schedconf.cvmfs.json
[2025-11-22 09:27:09] drwx------ 5 boincer umatlas      4096 Nov 22 02:13 pilot3
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas       532 Nov 22 09:15 boinc_task_state.xml
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 09:19 init_data.xml
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas 921215856 Nov 22 09:25 HITS.47533967._003894.pool.root.1
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas      1062 Nov 22 09:26 memory_monitor_summary.json
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas   1526164 Nov 22 09:26 agis_ddmendpoints.agis.ALL.json
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas   2175360 Nov 22 09:26 log.47533967._003894.job.log.tgz.1
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas      8680 Nov 22 09:26 heartbeat.json
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 09:26 boinc_mmap_file
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas        29 Nov 22 09:26 wrapper_checkpoint.txt
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas        95 Nov 22 09:27 pilot_heartbeat.json
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas      4746 Nov 22 09:27 pilotlog.txt
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas   3646013 Nov 22 09:27 log.47533967._003894.job.log.1
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas       353 Nov 22 09:27 output.list
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas       620 Nov 22 09:27 runtime_log
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas   5836800 Nov 22 09:27 result.tar.gz
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas       670 Nov 22 09:27 xYkKDmhfeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsMJKDmBORybn.diag
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 09:27 runtime_log.err
[2025-11-22 09:27:09] -rw-r--r-- 1 boincer umatlas     21439 Nov 22 09:27 stderr.txt
[2025-11-22 09:27:09] HITS file was successfully produced:
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas 921215856 Nov 22 09:25 shared/HITS.pool.root.1
[2025-11-22 09:27:09]  *** Contents of shared directory: ***
[2025-11-22 09:27:09] total 1306028
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas 409698831 Nov 22 02:13 ATLAS.root_0
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 02:13 start_atlas.sh
[2025-11-22 09:27:09] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 02:13 input.tar.gz
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas 921215856 Nov 22 09:25 HITS.pool.root.1
[2025-11-22 09:27:09] -rw------- 1 boincer umatlas   5836800 Nov 22 09:27 result.tar.gz
09:27:11 (8446): run_atlas exited; CPU time 290661.642863
09:27:11 (8446): called boinc_finish(0)

</stderr_txt>
]]>

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