Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:15 (3898124): wrapper (7.7.26015): starting
01:30:15 (3898124): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 01:30:15] Arguments: --nthreads 3
[2025-11-27 01:30:15] Threads: 3
[2025-11-27 01:30:15] Checking for CVMFS
[2025-11-27 01:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:30:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:30:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:30:15] 2.9.2.0 2173459 11808 99160 153341 3 56 11286841 36864001 0 130560 1 4383554 99.937 591008 882 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 01:30:15] CVMFS is ok
[2025-11-27 01:30:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:30:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:30:15] Further information can be found at the LHC@home message board.
[2025-11-27 01:30:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:30:15] Checking for apptainer binary...
[2025-11-27 01:30:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:30:15] Running /usr/bin/apptainer --version
[2025-11-27 01:30:15] apptainer version 1.4.1-1.1
[2025-11-27 01:30:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:30:15] thA361
[2025-11-27 01:30:15] apptainer works
[2025-11-27 01:30:15] Set ATHENA_PROC_NUMBER=3
[2025-11-27 01:30:15] Set ATHENA_CORE_NUMBER=3
[2025-11-27 01:30:15] Starting ATLAS job with PandaID=6894257123
[2025-11-27 01:30:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:29:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:29:59] 2025-11-27 08:28:57,263 | INFO     | time since job start (28716s) is within the limit (172800.0s)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,268 | INFO     | time since job start (28718s) is within the limit (172800.0s)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,529 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:29:59] 2025-11-27 08:28:59,530 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3821.1163333333334
[2025-11-27 09:29:59] 2025-11-27 08:28:59,531 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894257123/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,531 | INFO     | extracted standard info from prmon json
[2025-11-27 09:29:59] 2025-11-27 08:28:59,531 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:29:59] 2025-11-27 08:28:59,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:29:59] 2025-11-27 08:28:59,534 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:29:59] 2025-11-27 08:28:59,534 | INFO     | sum of square deviations: 32399565620.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,536 | INFO     | sum of deviations: 173097713717.99997
[2025-11-27 09:29:59] 2025-11-27 08:28:59,536 | INFO     | mean x: 1764217775.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,536 | INFO     | mean y: 2207146.278131635
[2025-11-27 09:29:59] 2025-11-27 08:28:59,536 | INFO     | intersect: -9423291545.119352
[2025-11-27 09:29:59] 2025-11-27 08:28:59,537 | INFO     | chi2: 3.7787619330442563
[2025-11-27 09:29:59] 2025-11-27 08:28:59,537 | INFO     | sum of square deviations: 31378644152.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,538 | INFO     | sum of deviations: 235643932994.99997
[2025-11-27 09:29:59] 2025-11-27 08:28:59,538 | INFO     | mean x: 1764217622.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,538 | INFO     | mean y: 2216451.5278969957
[2025-11-27 09:29:59] 2025-11-27 08:28:59,539 | INFO     | intersect: -13246513391.755224
[2025-11-27 09:29:59] 2025-11-27 08:28:59,539 | INFO     | chi2: 2.3523968061752023
[2025-11-27 09:29:59] 2025-11-27 08:28:59,539 | INFO     | current chi2=2.3523968061752023 (change=37.74689044038141 %)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,539 | INFO     | sum of square deviations: 30379397510.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | sum of deviations: 232060240274.00006
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | mean x: 1764217470.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | mean y: 2215903.84164859
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | intersect: -13474178084.84837
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | chi2: 2.351193491235192
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | current chi2=2.351193491235192 (change=0.0511527195093776 %)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | right removable region: 460
[2025-11-27 09:29:59] 2025-11-27 08:28:59,541 | INFO     | sum of square deviations: 31378644152.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | sum of deviations: 73875667872.50003
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | mean x: 1764217927.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | mean y: 2221946.6587982834
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | intersect: -4151328379.9035573
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | chi2: 1.6670015804179117
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | current chi2=1.6670015804179117 (change=55.884980055493 %)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,543 | INFO     | sum of square deviations: 30379397510.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | sum of deviations: 51254991238.00015
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | mean x: 1764218080.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | mean y: 2225382.9652928417
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | intersect: -2974297841.4520516
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | chi2: 1.4905466568045773
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | current chi2=1.4905466568045773 (change=10.585168345737124 %)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,545 | INFO     | left removable region: 20
[2025-11-27 09:29:59] 2025-11-27 08:28:59,546 | INFO     | sum of square deviations: 26414002230.0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,547 | INFO     | sum of deviations: 97822060343.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,547 | INFO     | mean x: 1764218049.5
[2025-11-27 09:29:59] 2025-11-27 08:28:59,547 | INFO     | mean y: 2236810.875
[2025-11-27 09:29:59] 2025-11-27 08:28:59,547 | INFO     | intersect: -6531398001.242636
[2025-11-27 09:29:59] 2025-11-27 08:28:59,547 | INFO     | chi2: 0.04385524613905676
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | current memory leak: 3.70 B/s (using 440 data points, chi2=0.04)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | could have reported an average CPU frequency of 3950 MHz (19 samples)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | ..............................
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . Timing measurements:
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . get job = 0 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . initial setup = 1 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . payload setup = 3 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . stage-in = 0 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . payload execution = 28689 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . stage-out = 1 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | . log creation = 0 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,548 | INFO     | ..............................
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | 
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | job summary report
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | --------------------------------------------------
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | PanDA job id: 6894257123
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | task id: 47533967
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | errors: (none)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | pilot state: finished 
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | transexitcode: 0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,961 | INFO     | exeerrorcode: 0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | exeerrordiag: 
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | exitcode: 0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | exitmsg: OK
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | cpuconsumptiontime: 84841 s
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | nevents: 1000
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | neventsw: 0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | pid: 3908293
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | pgrp: 3908293
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | corecount: 3
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | event service: False
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | sizes: {0: 2284317, 2: 2284579, 11: 2284607, 28696: 2323460, 28697: 2332460, 28699: 2332516, 28705: 2332890}
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | --------------------------------------------------
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | 
[2025-11-27 09:29:59] 2025-11-27 08:28:59,962 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | job 6894257123 has completed (purged errors)
[2025-11-27 09:29:59] 2025-11-27 08:28:59,978 | INFO     | overall cleanup function is called
[2025-11-27 09:29:59] 2025-11-27 08:29:00,987 | INFO     | --- collectZombieJob: --- 10, [3908293]
[2025-11-27 09:29:59] 2025-11-27 08:29:00,987 | INFO     | zombie collector waiting for pid 3908293
[2025-11-27 09:29:59] 2025-11-27 08:29:00,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:29:59] 2025-11-27 08:29:00,987 | INFO     | collected zombie processes
[2025-11-27 09:29:59] 2025-11-27 08:29:00,987 | INFO     | will attempt to kill all subprocesses of pid=3908293
[2025-11-27 09:29:59] 2025-11-27 08:29:01,032 | INFO     | process IDs to be killed: [3908293] (in reverse order)
[2025-11-27 09:29:59] 2025-11-27 08:29:01,056 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:29:59] 2025-11-27 08:29:01,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:29:59] 2025-11-27 08:29:01,058 | INFO     | did not find any defunct processes belonging to 3908293
[2025-11-27 09:29:59] 2025-11-27 08:29:01,059 | INFO     | did not find any defunct processes belonging to 3908293
[2025-11-27 09:29:59] 2025-11-27 08:29:01,059 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:29:59] 2025-11-27 08:29:01,059 | INFO     | ready for new job
[2025-11-27 09:29:59] 2025-11-27 08:29:01,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | ***************************************
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | ***************************************
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | 
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | architecture information:
[2025-11-27 09:29:59] 2025-11-27 08:29:01,061 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:29:59] 2025-11-27 08:29:01,070 | INFO     | cat /etc/os-release:
[2025-11-27 09:29:59] NAME="CentOS Linux"
[2025-11-27 09:29:59] VERSION="7 (Core)"
[2025-11-27 09:29:59] ID="centos"
[2025-11-27 09:29:59] ID_LIKE="rhel fedora"
[2025-11-27 09:29:59] VERSION_ID="7"
[2025-11-27 09:29:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:29:59] ANSI_COLOR="0;31"
[2025-11-27 09:29:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:29:59] HOME_URL="https://www.centos.org/"
[2025-11-27 09:29:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:29:59] 
[2025-11-27 09:29:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:29:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:29:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:29:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:29:59] 
[2025-11-27 09:29:59] 2025-11-27 08:29:01,070 | INFO     | ***************************************
[2025-11-27 09:29:59] 2025-11-27 08:29:01,573 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 09:29:59] 2025-11-27 08:29:01,585 | INFO     | sufficient remaining disk space (243084034048 B)
[2025-11-27 09:29:59] 2025-11-27 08:29:01,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:29:59] 2025-11-27 08:29:01,586 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:29:59] 2025-11-27 08:29:01,586 | INFO     | update_server=False
[2025-11-27 09:29:59] 2025-11-27 08:29:01,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:29:59] 2025-11-27 08:29:02,075 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 09:29:59] 2025-11-27 08:29:02,076 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 09:29:59] 2025-11-27 08:29:02,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:29:59] 2025-11-27 08:29:02,076 | INFO     | will abort loop
[2025-11-27 09:29:59] 2025-11-27 08:29:02,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:29:59] 2025-11-27 08:29:02,413 | INFO     | all data control threads have been joined
[2025-11-27 09:29:59] 2025-11-27 08:29:02,512 | INFO     | all payload control threads have been joined
[2025-11-27 09:29:59] 2025-11-27 08:29:02,591 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:02,599 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,052 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,065 | INFO     | all job control threads have been joined
[2025-11-27 09:29:59] 2025-11-27 08:29:03,081 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,273 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,419 | INFO     | [data] control thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,474 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:03,517 | INFO     | [payload] control thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,013 | INFO     | [job] validate thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,013 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,070 | INFO     | [job] control thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,120 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:29:59] 2025-11-27 08:29:04,381 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:04,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:29:59] 2025-11-27 08:29:05,596 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:08,130 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:29:59] 2025-11-27 08:29:32,384 | INFO     | PID=3901842 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:29:59] 2025-11-27 08:29:32,384 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:29:59] 2025-11-27 08:29:32,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:29:59] 2025-11-27 08:29:32,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:29:59] 2025-11-27 08:29:54,118 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:29:59] 2025-11-27 08:29:54,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739299657536)>', '<ExcThread(monitor, started 139738933602048)>']
[2025-11-27 09:29:59] 2025-11-27 08:29:55,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:29:59] 2025-11-27 08:29:55,506 | INFO     | [monitor] control thread has ended
[2025-11-27 09:29:59] 2025-11-27 08:29:59,672 | INFO     | all workflow threads have been joined
[2025-11-27 09:29:59] 2025-11-27 08:29:59,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:29:59] 2025-11-27 08:29:59,673 | INFO     | traces error code: 0
[2025-11-27 09:29:59] 2025-11-27 08:29:59,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:29:59] 2025-11-27 08:29:59,723 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:29:59] 2025-11-27 08:29:59,726 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:29:59] 2025-11-27 08:29:59,728 [wrapper] pilotpid: 3901842
[2025-11-27 09:29:59] 2025-11-27 08:29:59,730 [wrapper] Pilot exit status: 0
[2025-11-27 09:29:59] 2025-11-27 08:29:59,737 [wrapper] pandaids: 6894257123
[2025-11-27 09:29:59] 2025-11-27 08:29:59,754 [wrapper] cleanup supervisor_pilot 3958095 3901843
[2025-11-27 09:29:59] 2025-11-27 08:29:59,757 [wrapper] Test setup, not cleaning
[2025-11-27 09:29:59] 2025-11-27 08:29:59,759 [wrapper] apfmon messages muted
[2025-11-27 09:29:59] 2025-11-27 08:29:59,761 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:29:59] 2025-11-27 08:29:59,764 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:29:59]  *** Error codes and diagnostics ***
[2025-11-27 09:29:59]     "exeErrorCode": 0,
[2025-11-27 09:29:59]     "exeErrorDiag": "",
[2025-11-27 09:29:59]     "pilotErrorCode": 0,
[2025-11-27 09:29:59]     "pilotErrorDiag": "",
[2025-11-27 09:29:59]  *** Listing of results directory ***
[2025-11-27 09:29:59] total 1306896
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc    576529 Nov 21 03:51 pilot3.tar.gz
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc      5112 Nov 21 04:07 queuedata.json
[2025-11-27 09:29:59] -rwx------ 1 boinc boinc     36292 Nov 21 04:08 runpilot2-wrapper.sh
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:29:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:30 run_atlas
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:30 job.xml
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc 408801835 Nov 27 01:30 EVNT.47493127._002151.pool.root.1
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc    590104 Nov 27 01:30 input.tar.gz
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:30 start_atlas.sh
[2025-11-27 09:29:59] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:30 shared
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:30 boinc_setup_complete
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc      6441 Nov 27 01:30 init_data.xml
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:30 boinc_lockfile
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc      2785 Nov 27 01:30 pandaJob.out
[2025-11-27 09:29:59] -rw------- 1 boinc boinc    991546 Nov 27 01:30 agis_schedconf.cvmfs.json
[2025-11-27 09:29:59] drwx------ 5 boinc boinc      4096 Nov 27 01:30 pilot3
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc       531 Nov 27 09:26 boinc_task_state.xml
[2025-11-27 09:29:59] -rw------- 1 boinc boinc 915135294 Nov 27 09:28 HITS.47533967._001222.pool.root.1
[2025-11-27 09:29:59] -rw------- 1 boinc boinc        95 Nov 27 09:28 pilot_heartbeat.json
[2025-11-27 09:29:59] -rw------- 1 boinc boinc      1026 Nov 27 09:28 memory_monitor_summary.json
[2025-11-27 09:29:59] -rw------- 1 boinc boinc   1516240 Nov 27 09:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:29:59] -rw------- 1 boinc boinc   1161877 Nov 27 09:28 log.47533967._001222.job.log.tgz.1
[2025-11-27 09:29:59] -rw------- 1 boinc boinc      8563 Nov 27 09:28 heartbeat.json
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc      8192 Nov 27 09:29 boinc_mmap_file
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc        28 Nov 27 09:29 wrapper_checkpoint.txt
[2025-11-27 09:29:59] -rw------- 1 boinc boinc      4938 Nov 27 09:29 pilotlog.txt
[2025-11-27 09:29:59] -rw------- 1 boinc boinc   4041414 Nov 27 09:29 log.47533967._001222.job.log.1
[2025-11-27 09:29:59] -rw------- 1 boinc boinc       353 Nov 27 09:29 output.list
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc       620 Nov 27 09:29 runtime_log
[2025-11-27 09:29:59] -rw------- 1 boinc boinc   5222400 Nov 27 09:29 result.tar.gz
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc      8898 Nov 27 09:29 runtime_log.err
[2025-11-27 09:29:59] -rw------- 1 boinc boinc       665 Nov 27 09:29 gAZNDmVgWg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmovIKDmRCjXUn.diag
[2025-11-27 09:29:59] -rw-r--r-- 1 boinc boinc     21230 Nov 27 09:29 stderr.txt
[2025-11-27 09:29:59] HITS file was successfully produced:
[2025-11-27 09:29:59] -rw------- 1 boinc boinc 915135294 Nov 27 09:28 shared/HITS.pool.root.1
[2025-11-27 09:29:59]  *** Contents of shared directory: ***
[2025-11-27 09:29:59] total 1298616
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc 408801835 Nov 27 01:30 ATLAS.root_0
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc    590104 Nov 27 01:30 input.tar.gz
[2025-11-27 09:29:59] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:30 start_atlas.sh
[2025-11-27 09:29:59] -rw------- 1 boinc boinc 915135294 Nov 27 09:28 HITS.pool.root.1
[2025-11-27 09:29:59] -rw------- 1 boinc boinc   5222400 Nov 27 09:29 result.tar.gz
09:30:01 (3898124): run_atlas exited; CPU time 84876.075498
09:30:01 (3898124): called boinc_finish(0)

</stderr_txt>
]]>

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