Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:24:19 (29712): wrapper (7.7.26015): starting
01:24:19 (29712): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 01:24:19] Arguments: --nthreads 8
[2025-11-22 01:24:19] Threads: 8
[2025-11-22 01:24:19] Checking for CVMFS
[2025-11-22 01:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:24:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:24:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:24:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:24:19] 2.11.2.0 2934 170700 82568 153162 2 81 11434010 20275200 1 130560 1 64457772 99.957 7373403 22358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 01:24:19] CVMFS is ok
[2025-11-22 01:24:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 01:24:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 01:24:19] Further information can be found at the LHC@home message board.
[2025-11-22 01:24:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:24:19] Checking for apptainer binary...
[2025-11-22 01:24:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 01:24:19] Running /usr/bin/apptainer --version
[2025-11-22 01:24:19] apptainer version 1.3.2-1.el7
[2025-11-22 01:24:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:24:21] c-204-33.aglt2.org
[2025-11-22 01:24:21] apptainer works
[2025-11-22 01:24:21] Set ATHENA_PROC_NUMBER=8
[2025-11-22 01:24:21] Set ATHENA_CORE_NUMBER=8
[2025-11-22 01:24:21] Starting ATLAS job with PandaID=6893935556
[2025-11-22 01:24:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 06:43:21]  *** The last 200 lines of the pilot log: ***
[2025-11-22 06:43:21] 2025-11-22 11:42:48,384 | INFO     | time since job start (19090s) is within the limit (172800.0s)
[2025-11-22 06:43:21] 2025-11-22 11:42:48,985 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 06:43:21] 2025-11-22 11:42:48,989 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.0
[2025-11-22 06:43:21] 2025-11-22 11:42:48,992 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893935556/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 06:43:21] 2025-11-22 11:42:48,994 | INFO     | extracted standard info from prmon json
[2025-11-22 06:43:21] 2025-11-22 11:42:48,994 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 06:43:21] 2025-11-22 11:42:48,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 06:43:21] 2025-11-22 11:42:48,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 06:43:21] 2025-11-22 11:42:48,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 06:43:21] 2025-11-22 11:42:49,001 | INFO     | fitting pss+swap vs Time
[2025-11-22 06:43:21] 2025-11-22 11:42:49,002 | INFO     | sum of square deviations: 9508390372.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,004 | INFO     | sum of deviations: -21862683893.99999
[2025-11-22 06:43:21] 2025-11-22 11:42:49,004 | INFO     | mean x: 1763802226.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,005 | INFO     | mean y: 2567778.6453674124
[2025-11-22 06:43:21] 2025-11-22 11:42:49,005 | INFO     | intersect: 4058086011.48171
[2025-11-22 06:43:21] 2025-11-22 11:42:49,005 | INFO     | chi2: 2.516000397499945
[2025-11-22 06:43:21] 2025-11-22 11:42:49,006 | INFO     | sum of square deviations: 9059954057.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,008 | INFO     | sum of deviations: -385303541.500015
[2025-11-22 06:43:21] 2025-11-22 11:42:49,008 | INFO     | mean x: 1763802073.5
[2025-11-22 06:43:21] 2025-11-22 11:42:49,008 | INFO     | mean y: 2574988.951298701
[2025-11-22 06:43:21] 2025-11-22 11:42:49,008 | INFO     | intersect: 77586316.9502018
[2025-11-22 06:43:21] 2025-11-22 11:42:49,009 | INFO     | chi2: 1.7517302711069542
[2025-11-22 06:43:21] 2025-11-22 11:42:49,009 | INFO     | current chi2=1.7517302711069542 (change=30.376391321417007 %)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,009 | INFO     | sum of square deviations: 8625843592.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,012 | INFO     | sum of deviations: -485039852.9999998
[2025-11-22 06:43:21] 2025-11-22 11:42:49,012 | INFO     | mean x: 1763801921.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,012 | INFO     | mean y: 2574953.9141914193
[2025-11-22 06:43:21] 2025-11-22 11:42:49,012 | INFO     | intersect: 101755308.31760307
[2025-11-22 06:43:21] 2025-11-22 11:42:49,012 | INFO     | chi2: 1.7516154077233008
[2025-11-22 06:43:21] 2025-11-22 11:42:49,013 | INFO     | current chi2=1.7516154077233008 (change=0.006557138707252167 %)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,013 | INFO     | right removable region: 302
[2025-11-22 06:43:21] 2025-11-22 11:42:49,013 | INFO     | sum of square deviations: 9059954057.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,015 | INFO     | sum of deviations: -72665521110.99998
[2025-11-22 06:43:21] 2025-11-22 11:42:49,016 | INFO     | mean x: 1763802378.5
[2025-11-22 06:43:21] 2025-11-22 11:42:49,016 | INFO     | mean y: 2584931.4935064935
[2025-11-22 06:43:21] 2025-11-22 11:42:49,016 | INFO     | intersect: 14149192978.749273
[2025-11-22 06:43:21] 2025-11-22 11:42:49,016 | INFO     | chi2: 1.0000354115293633
[2025-11-22 06:43:21] 2025-11-22 11:42:49,016 | INFO     | current chi2=1.0000354115293633 (change=60.252970845193 %)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,017 | INFO     | sum of square deviations: 8625843592.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,019 | INFO     | sum of deviations: -77678828681.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,019 | INFO     | mean x: 1763802531.0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,019 | INFO     | mean y: 2586680.303630363
[2025-11-22 06:43:21] 2025-11-22 11:42:49,019 | INFO     | intersect: 15886263815.341484
[2025-11-22 06:43:21] 2025-11-22 11:42:49,020 | INFO     | chi2: 0.9690792465814835
[2025-11-22 06:43:21] 2025-11-22 11:42:49,020 | INFO     | current chi2=0.9690792465814835 (change=3.0955068781552684 %)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,020 | INFO     | left removable region: 20
[2025-11-22 06:43:21] 2025-11-22 11:42:49,021 | INFO     | sum of square deviations: 6953769450.5
[2025-11-22 06:43:21] 2025-11-22 11:42:49,022 | INFO     | sum of deviations: -39655803265.49999
[2025-11-22 06:43:21] 2025-11-22 11:42:49,023 | INFO     | mean x: 1763802500.5
[2025-11-22 06:43:21] 2025-11-22 11:42:49,023 | INFO     | mean y: 2588681.514184397
[2025-11-22 06:43:21] 2025-11-22 11:42:49,023 | INFO     | intersect: 10061162733.605553
[2025-11-22 06:43:21] 2025-11-22 11:42:49,023 | INFO     | chi2: 0.1660861009873682
[2025-11-22 06:43:21] 2025-11-22 11:42:49,023 | INFO     | current memory leak: -5.70 B/s (using 282 data points, chi2=0.17)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,024 | INFO     | could have reported an average CPU frequency of 2121 MHz (14 samples)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,024 | INFO     | ..............................
[2025-11-22 06:43:21] 2025-11-22 11:42:49,024 | INFO     | . Timing measurements:
[2025-11-22 06:43:21] 2025-11-22 11:42:49,024 | INFO     | . get job = 0 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,024 | INFO     | . initial setup = 2 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | . payload setup = 9 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | . stage-in = 0 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | . payload execution = 19046 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | . stage-out = 2 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | . log creation = 0 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,025 | INFO     | ..............................
[2025-11-22 06:43:21] 2025-11-22 11:42:49,240 | INFO     | 
[2025-11-22 06:43:21] 2025-11-22 11:42:49,240 | INFO     | job summary report
[2025-11-22 06:43:21] 2025-11-22 11:42:49,240 | INFO     | --------------------------------------------------
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | PanDA job id: 6893935556
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | task id: 47523634
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | errors: (none)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | pilot state: finished 
[2025-11-22 06:43:21] 2025-11-22 11:42:49,241 | INFO     | transexitcode: 0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | exeerrorcode: 0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | exeerrordiag: 
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | exitcode: 0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | exitmsg: OK
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | cpuconsumptiontime: 145881 s
[2025-11-22 06:43:21] 2025-11-22 11:42:49,242 | INFO     | nevents: 400
[2025-11-22 06:43:21] 2025-11-22 11:42:49,243 | INFO     | neventsw: 0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,243 | INFO     | pid: 8515
[2025-11-22 06:43:21] 2025-11-22 11:42:49,243 | INFO     | pgrp: 8515
[2025-11-22 06:43:21] 2025-11-22 11:42:49,243 | INFO     | corecount: 8
[2025-11-22 06:43:21] 2025-11-22 11:42:49,243 | INFO     | event service: False
[2025-11-22 06:43:21] 2025-11-22 11:42:49,244 | INFO     | sizes: {0: 2298286, 1: 2298485, 7: 2298747, 12: 2298775, 19060: 2331798, 19063: 2340796, 19066: 2340980, 19074: 2341174}
[2025-11-22 06:43:21] 2025-11-22 11:42:49,244 | INFO     | --------------------------------------------------
[2025-11-22 06:43:21] 2025-11-22 11:42:49,244 | INFO     | 
[2025-11-22 06:43:21] 2025-11-22 11:42:49,244 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 06:43:21] 2025-11-22 11:42:49,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 06:43:21] 2025-11-22 11:42:49,273 | INFO     | job 6893935556 has completed (purged errors)
[2025-11-22 06:43:21] 2025-11-22 11:42:49,274 | INFO     | overall cleanup function is called
[2025-11-22 06:43:21] 2025-11-22 11:42:50,282 | INFO     | --- collectZombieJob: --- 10, [8515]
[2025-11-22 06:43:21] 2025-11-22 11:42:50,283 | INFO     | zombie collector waiting for pid 8515
[2025-11-22 06:43:21] 2025-11-22 11:42:50,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 06:43:21] 2025-11-22 11:42:50,283 | INFO     | collected zombie processes
[2025-11-22 06:43:21] 2025-11-22 11:42:50,283 | INFO     | will attempt to kill all subprocesses of pid=8515
[2025-11-22 06:43:21] 2025-11-22 11:42:50,372 | INFO     | process IDs to be killed: [8515] (in reverse order)
[2025-11-22 06:43:21] 2025-11-22 11:42:50,431 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 06:43:21] 2025-11-22 11:42:50,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 06:43:21] 2025-11-22 11:42:50,435 | INFO     | did not find any defunct processes belonging to 8515
[2025-11-22 06:43:21] 2025-11-22 11:42:50,439 | INFO     | did not find any defunct processes belonging to 8515
[2025-11-22 06:43:21] 2025-11-22 11:42:50,441 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 06:43:21] 2025-11-22 11:42:50,442 | INFO     | ready for new job
[2025-11-22 06:43:21] 2025-11-22 11:42:50,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 06:43:21] 2025-11-22 11:42:50,445 | INFO     | ***************************************
[2025-11-22 06:43:21] 2025-11-22 11:42:50,445 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 06:43:21] 2025-11-22 11:42:50,445 | INFO     | ***************************************
[2025-11-22 06:43:21] 2025-11-22 11:42:50,445 | INFO     | 
[2025-11-22 06:43:21] 2025-11-22 11:42:50,446 | INFO     | architecture information:
[2025-11-22 06:43:21] 2025-11-22 11:42:50,446 | INFO     | executing command: cat /etc/os-release
[2025-11-22 06:43:21] 2025-11-22 11:42:50,464 | INFO     | cat /etc/os-release:
[2025-11-22 06:43:21] NAME="CentOS Linux"
[2025-11-22 06:43:21] VERSION="7 (Core)"
[2025-11-22 06:43:21] ID="centos"
[2025-11-22 06:43:21] ID_LIKE="rhel fedora"
[2025-11-22 06:43:21] VERSION_ID="7"
[2025-11-22 06:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 06:43:21] ANSI_COLOR="0;31"
[2025-11-22 06:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 06:43:21] HOME_URL="https://www.centos.org/"
[2025-11-22 06:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 06:43:21] 
[2025-11-22 06:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 06:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 06:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 06:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 06:43:21] 
[2025-11-22 06:43:21] 2025-11-22 11:42:50,464 | INFO     | ***************************************
[2025-11-22 06:43:21] 2025-11-22 11:42:50,967 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 06:43:21] 2025-11-22 11:42:50,986 | INFO     | sufficient remaining disk space (18266193920 B)
[2025-11-22 06:43:21] 2025-11-22 11:42:50,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 06:43:21] 2025-11-22 11:42:50,987 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 06:43:21] 2025-11-22 11:42:50,987 | INFO     | update_server=False
[2025-11-22 06:43:21] 2025-11-22 11:42:50,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 06:43:21] 2025-11-22 11:42:50,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:43:21] 2025-11-22 11:42:51,015 | INFO     | all data control threads have been joined
[2025-11-22 06:43:21] 2025-11-22 11:42:51,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 06:43:21] 2025-11-22 11:42:51,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:43:21] 2025-11-22 11:42:51,318 | INFO     | aborting loop
[2025-11-22 06:43:21] 2025-11-22 11:42:51,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 06:43:21] 2025-11-22 11:42:51,749 | INFO     | all payload control threads have been joined
[2025-11-22 06:43:21] 2025-11-22 11:42:51,991 | INFO     | [job] queue monitor thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:51,993 | INFO     | [job] retrieve thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,020 | INFO     | [data] control thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,265 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,304 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,307 | INFO     | [data] copytool_in thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,308 | INFO     | [job] validate thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,323 | INFO     | [job] job monitor thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:52,495 | INFO     | all job control threads have been joined
[2025-11-22 06:43:21] 2025-11-22 11:42:52,754 | INFO     | [payload] control thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:53,275 | INFO     | [data] copytool_out thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:53,276 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:53,440 | INFO     | [payload] failed_post thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:53,460 | INFO     | [payload] validate_post thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:53,496 | INFO     | [job] control thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:42:55,351 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:43:01,171 | INFO     | job.realtimelogging is not enabled
[2025-11-22 06:43:21] 2025-11-22 11:43:02,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 06:43:21] 2025-11-22 11:43:08,664 | INFO     | [monitor] cgroup control has ended
[2025-11-22 06:43:21] 2025-11-22 11:43:09,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970664847168)>', '<ExcThread(monitor, started 139970073315072)>']
[2025-11-22 06:43:21] 2025-11-22 11:43:14,253 | INFO     | all workflow threads have been joined
[2025-11-22 06:43:21] 2025-11-22 11:43:14,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 06:43:21] 2025-11-22 11:43:14,259 | INFO     | traces error code: 0
[2025-11-22 06:43:21] 2025-11-22 11:43:14,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 06:43:21] 2025-11-22 11:43:21,603 | INFO     | PID=933 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-22 06:43:21] 2025-11-22 11:43:21,604 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 06:43:21] 2025-11-22 11:43:21,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 06:43:21] 2025-11-22 11:43:21,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 06:43:21] 2025-11-22 11:43:21,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 06:43:21] 2025-11-22 11:43:21,604 | INFO     | [monitor] control thread has ended
[2025-11-22 06:43:21] 2025-11-22 11:43:21,723 [wrapper] ==== pilot stdout END ====
[2025-11-22 06:43:21] 2025-11-22 11:43:21,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 06:43:21] 2025-11-22 11:43:21,731 [wrapper] pilotpid: 933
[2025-11-22 06:43:21] 2025-11-22 11:43:21,736 [wrapper] Pilot exit status: 0
[2025-11-22 06:43:21] 2025-11-22 11:43:21,753 [wrapper] pandaids: 6893935556
[2025-11-22 06:43:21] 2025-11-22 11:43:21,796 [wrapper] cleanup supervisor_pilot 11006 934
[2025-11-22 06:43:21] 2025-11-22 11:43:21,800 [wrapper] Test setup, not cleaning
[2025-11-22 06:43:21] 2025-11-22 11:43:21,805 [wrapper] apfmon messages muted
[2025-11-22 06:43:21] 2025-11-22 11:43:21,810 [wrapper] ==== wrapper stdout END ====
[2025-11-22 06:43:21] 2025-11-22 11:43:21,814 [wrapper] ==== wrapper stderr END ====
[2025-11-22 06:43:21]  *** Error codes and diagnostics ***
[2025-11-22 06:43:21]     "exeErrorCode": 0,
[2025-11-22 06:43:21]     "exeErrorDiag": "",
[2025-11-22 06:43:21]     "pilotErrorCode": 0,
[2025-11-22 06:43:21]     "pilotErrorDiag": "",
[2025-11-22 06:43:21]  *** Listing of results directory ***
[2025-11-22 06:43:21] total 638376
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 23:12 pilot3.tar.gz
[2025-11-22 06:43:21] -rwx------ 1 boincer umatlas     36292 Nov 20 23:55 runpilot2-wrapper.sh
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 23:55 queuedata.json
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas       100 Nov 22 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 06:43:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 01:24 run_atlas
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas       105 Nov 22 01:24 job.xml
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas 304190686 Nov 22 01:24 EVNT.47523632._000003.pool.root.1
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 01:24 start_atlas.sh
[2025-11-22 06:43:21] drwxrwx--x 2 boincer umatlas      4096 Nov 22 01:24 shared
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas    589957 Nov 22 01:24 input.tar.gz
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas         0 Nov 22 01:24 boinc_lockfile
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas      2628 Nov 22 01:24 pandaJob.out
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas        57 Nov 22 01:24 setup.sh.local
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas    989752 Nov 22 01:24 agis_schedconf.cvmfs.json
[2025-11-22 06:43:21] drwx------ 5 boincer umatlas      4096 Nov 22 01:24 pilot3
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 06:37 init_data.xml
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas 339300588 Nov 22 06:41 HITS.47523634._000067.pool.root.1
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas       531 Nov 22 06:42 boinc_task_state.xml
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas      1056 Nov 22 06:42 memory_monitor_summary.json
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas   1526164 Nov 22 06:42 agis_ddmendpoints.agis.ALL.json
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas    534165 Nov 22 06:42 log.47523634._000067.job.log.tgz.1
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas      7844 Nov 22 06:42 heartbeat.json
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 06:42 boinc_mmap_file
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas        29 Nov 22 06:42 wrapper_checkpoint.txt
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas        95 Nov 22 06:43 pilot_heartbeat.json
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas       743 Nov 22 06:43 pilotlog.txt
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas   2607198 Nov 22 06:43 log.47523634._000067.job.log.1
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas       357 Nov 22 06:43 output.list
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas       620 Nov 22 06:43 runtime_log
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas   3164160 Nov 22 06:43 result.tar.gz
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas       665 Nov 22 06:43 xUzLDmLMYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfJHKDmwTK5Kn.diag
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 06:43 runtime_log.err
[2025-11-22 06:43:21] -rw-r--r-- 1 boincer umatlas     21148 Nov 22 06:43 stderr.txt
[2025-11-22 06:43:21] HITS file was successfully produced:
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas 339300588 Nov 22 06:41 shared/HITS.pool.root.1
[2025-11-22 06:43:21]  *** Contents of shared directory: ***
[2025-11-22 06:43:21] total 632108
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas 304190686 Nov 22 01:24 ATLAS.root_0
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 01:24 start_atlas.sh
[2025-11-22 06:43:21] -rw-r--r-- 2 boincer umatlas    589957 Nov 22 01:24 input.tar.gz
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas 339300588 Nov 22 06:41 HITS.pool.root.1
[2025-11-22 06:43:21] -rw------- 1 boincer umatlas   3164160 Nov 22 06:43 result.tar.gz
06:43:23 (29712): run_atlas exited; CPU time 145779.652069
06:43:23 (29712): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN