Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:30:38 (26108): wrapper (7.7.26015): starting
00:30:38 (26108): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 00:30:38] Arguments: --nthreads 12
[2025-11-22 00:30:38] Threads: 12
[2025-11-22 00:30:38] Checking for CVMFS
[2025-11-22 00:30:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:30:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:30:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:30:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:30:38] 2.11.2.0 2987 281458 95224 153161 3 81 20260340 20275201 1 130560 1 126430942 99.966 16837228 13956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:30:38] CVMFS is ok
[2025-11-22 00:30:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:30:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:30:38] Further information can be found at the LHC@home message board.
[2025-11-22 00:30:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:30:38] Checking for apptainer binary...
[2025-11-22 00:30:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:30:38] Running /usr/bin/apptainer --version
[2025-11-22 00:30:38] apptainer version 1.3.2-1.el7
[2025-11-22 00:30:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:30:39] c-205-19.aglt2.org
[2025-11-22 00:30:39] apptainer works
[2025-11-22 00:30:39] Set ATHENA_PROC_NUMBER=12
[2025-11-22 00:30:39] Set ATHENA_CORE_NUMBER=12
[2025-11-22 00:30:39] Starting ATLAS job with PandaID=6895329683
[2025-11-22 00:30:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:33:50]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:33:50] 2025-11-22 12:33:15,108 | INFO     | time since job start (25340s) is within the limit (172800.0s)
[2025-11-22 07:33:50] 2025-11-22 12:33:17,113 | INFO     | time since job start (25342s) is within the limit (172800.0s)
[2025-11-22 07:33:50] 2025-11-22 12:33:17,378 | INFO     | monitor loop #1899: job 0:6895329683 is in state 'finished'
[2025-11-22 07:33:50] 2025-11-22 12:33:17,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,382 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 07:33:50] 2025-11-22 12:33:18,386 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-22 07:33:50] 2025-11-22 12:33:18,388 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895329683/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,389 | INFO     | extracted standard info from prmon json
[2025-11-22 07:33:50] 2025-11-22 12:33:18,389 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:33:50] 2025-11-22 12:33:18,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:33:50] 2025-11-22 12:33:18,397 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:33:50] 2025-11-22 12:33:18,398 | INFO     | sum of square deviations: 22162734911.33979
[2025-11-22 07:33:50] 2025-11-22 12:33:18,402 | INFO     | sum of deviations: 382742536828.219
[2025-11-22 07:33:50] 2025-11-22 12:33:18,402 | INFO     | mean x: 1763802112.2120483
[2025-11-22 07:33:50] 2025-11-22 12:33:18,402 | INFO     | mean y: 3438233.236144578
[2025-11-22 07:33:50] 2025-11-22 12:33:18,402 | INFO     | intersect: -30456795920.69933
[2025-11-22 07:33:50] 2025-11-22 12:33:18,403 | INFO     | chi2: 4.740461844582183
[2025-11-22 07:33:50] 2025-11-22 12:33:18,403 | INFO     | sum of square deviations: 21371314353.612152
[2025-11-22 07:33:50] 2025-11-22 12:33:18,407 | INFO     | sum of deviations: 520207319008.51215
[2025-11-22 07:33:50] 2025-11-22 12:33:18,407 | INFO     | mean x: 1763801959.7146342
[2025-11-22 07:33:50] 2025-11-22 12:33:18,407 | INFO     | mean y: 3464674.4146341463
[2025-11-22 07:33:50] 2025-11-22 12:33:18,407 | INFO     | intersect: -42929911979.13815
[2025-11-22 07:33:50] 2025-11-22 12:33:18,408 | INFO     | chi2: 2.3500665270248824
[2025-11-22 07:33:50] 2025-11-22 12:33:18,408 | INFO     | current chi2=2.3500665270248824 (change=50.42536773688527 %)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,408 | INFO     | sum of square deviations: 20598963920.87903
[2025-11-22 07:33:50] 2025-11-22 12:33:18,412 | INFO     | sum of deviations: 513989822633.6718
[2025-11-22 07:33:50] 2025-11-22 12:33:18,412 | INFO     | mean x: 1763801807.217284
[2025-11-22 07:33:50] 2025-11-22 12:33:18,412 | INFO     | mean y: 3463436.4469135804
[2025-11-22 07:33:50] 2025-11-22 12:33:18,412 | INFO     | intersect: -44007302422.20191
[2025-11-22 07:33:50] 2025-11-22 12:33:18,412 | INFO     | chi2: 2.333114387411415
[2025-11-22 07:33:50] 2025-11-22 12:33:18,413 | INFO     | current chi2=2.333114387411415 (change=0.7213472222392034 %)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,413 | INFO     | right removable region: 404
[2025-11-22 07:33:50] 2025-11-22 12:33:18,413 | INFO     | sum of square deviations: 21371260673.612152
[2025-11-22 07:33:50] 2025-11-22 12:33:18,417 | INFO     | sum of deviations: 253982603096.58078
[2025-11-22 07:33:50] 2025-11-22 12:33:18,417 | INFO     | mean x: 1763802264.7146342
[2025-11-22 07:33:50] 2025-11-22 12:33:18,417 | INFO     | mean y: 3462951.936585366
[2025-11-22 07:33:50] 2025-11-22 12:33:18,417 | INFO     | intersect: -20958103021.23962
[2025-11-22 07:33:50] 2025-11-22 12:33:18,418 | INFO     | chi2: 2.5274949734628454
[2025-11-22 07:33:50] 2025-11-22 12:33:18,418 | INFO     | current chi2=2.5274949734628454 (change=46.68251625416014 %)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,418 | INFO     | sum of square deviations: 20598881814.311134
[2025-11-22 07:33:50] 2025-11-22 12:33:18,422 | INFO     | sum of deviations: 223836791666.42206
[2025-11-22 07:33:50] 2025-11-22 12:33:18,422 | INFO     | mean x: 1763802417.214815
[2025-11-22 07:33:50] 2025-11-22 12:33:18,422 | INFO     | mean y: 3468896.0296296296
[2025-11-22 07:33:50] 2025-11-22 12:33:18,422 | INFO     | intersect: -19162808077.730812
[2025-11-22 07:33:50] 2025-11-22 12:33:18,423 | INFO     | chi2: 2.48198114970748
[2025-11-22 07:33:50] 2025-11-22 12:33:18,423 | INFO     | current chi2=2.48198114970748 (change=1.8007483390959336 %)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,423 | INFO     | left removable region: 20
[2025-11-22 07:33:50] 2025-11-22 12:33:18,423 | INFO     | sum of square deviations: 17557923842.73951
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | sum of deviations: 317357635245.81757
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | mean x: 1763802386.7239583
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | mean y: 3502930.8567708335
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | intersect: -31877040549.408566
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | chi2: 0.03364348536528846
[2025-11-22 07:33:50] 2025-11-22 12:33:18,427 | INFO     | current memory leak: 18.07 B/s (using 384 data points, chi2=0.03)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | could have reported an average CPU frequency of 2411 MHz (17 samples)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | ..............................
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | . Timing measurements:
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | . get job = 0 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | . initial setup = 2 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,428 | INFO     | . payload setup = 8 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,429 | INFO     | . stage-in = 0 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,429 | INFO     | . payload execution = 25302 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,429 | INFO     | . stage-out = 3 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,429 | INFO     | . log creation = 0 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,429 | INFO     | ..............................
[2025-11-22 07:33:50] 2025-11-22 12:33:18,847 | INFO     | 
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | job summary report
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | --------------------------------------------------
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | PanDA job id: 6895329683
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | task id: 47556137
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | errors: (none)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | pilot state: finished 
[2025-11-22 07:33:50] 2025-11-22 12:33:18,848 | INFO     | transexitcode: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | exeerrorcode: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | exeerrordiag: 
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | exitcode: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | exitmsg: OK
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | cpuconsumptiontime: 292056 s
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | nevents: 1000
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | neventsw: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | pid: 4058
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | pgrp: 4058
[2025-11-22 07:33:50] 2025-11-22 12:33:18,849 | INFO     | corecount: 12
[2025-11-22 07:33:50] 2025-11-22 12:33:18,850 | INFO     | event service: False
[2025-11-22 07:33:50] 2025-11-22 12:33:18,850 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25313: 2336054, 25318: 2345048, 25322: 2345104, 25327: 2345542}
[2025-11-22 07:33:50] 2025-11-22 12:33:18,850 | INFO     | --------------------------------------------------
[2025-11-22 07:33:50] 2025-11-22 12:33:18,850 | INFO     | 
[2025-11-22 07:33:50] 2025-11-22 12:33:18,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 07:33:50] 2025-11-22 12:33:18,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,942 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:33:50] 2025-11-22 12:33:18,942 | INFO     | job 6895329683 has completed (purged errors)
[2025-11-22 07:33:50] 2025-11-22 12:33:18,943 | INFO     | overall cleanup function is called
[2025-11-22 07:33:50] 2025-11-22 12:33:19,958 | INFO     | --- collectZombieJob: --- 10, [4058]
[2025-11-22 07:33:50] 2025-11-22 12:33:19,959 | INFO     | zombie collector waiting for pid 4058
[2025-11-22 07:33:50] 2025-11-22 12:33:19,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:33:50] 2025-11-22 12:33:19,965 | INFO     | collected zombie processes
[2025-11-22 07:33:50] 2025-11-22 12:33:19,965 | INFO     | will attempt to kill all subprocesses of pid=4058
[2025-11-22 07:33:50] 2025-11-22 12:33:20,055 | INFO     | process IDs to be killed: [4058] (in reverse order)
[2025-11-22 07:33:50] 2025-11-22 12:33:20,103 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:33:50] 2025-11-22 12:33:20,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:33:50] 2025-11-22 12:33:20,107 | INFO     | did not find any defunct processes belonging to 4058
[2025-11-22 07:33:50] 2025-11-22 12:33:20,110 | INFO     | did not find any defunct processes belonging to 4058
[2025-11-22 07:33:50] 2025-11-22 12:33:20,112 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:33:50] 2025-11-22 12:33:20,112 | INFO     | ready for new job
[2025-11-22 07:33:50] 2025-11-22 12:33:20,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:33:50] 2025-11-22 12:33:20,115 | INFO     | ***************************************
[2025-11-22 07:33:50] 2025-11-22 12:33:20,115 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:33:50] 2025-11-22 12:33:20,115 | INFO     | ***************************************
[2025-11-22 07:33:50] 2025-11-22 12:33:20,115 | INFO     | 
[2025-11-22 07:33:50] 2025-11-22 12:33:20,116 | INFO     | architecture information:
[2025-11-22 07:33:50] 2025-11-22 12:33:20,117 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:33:50] 2025-11-22 12:33:20,132 | INFO     | cat /etc/os-release:
[2025-11-22 07:33:50] NAME="CentOS Linux"
[2025-11-22 07:33:50] VERSION="7 (Core)"
[2025-11-22 07:33:50] ID="centos"
[2025-11-22 07:33:50] ID_LIKE="rhel fedora"
[2025-11-22 07:33:50] VERSION_ID="7"
[2025-11-22 07:33:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:33:50] ANSI_COLOR="0;31"
[2025-11-22 07:33:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:33:50] HOME_URL="https://www.centos.org/"
[2025-11-22 07:33:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:33:50] 
[2025-11-22 07:33:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:33:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:33:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:33:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:33:50] 
[2025-11-22 07:33:50] 2025-11-22 12:33:20,133 | INFO     | ***************************************
[2025-11-22 07:33:50] 2025-11-22 12:33:20,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 07:33:50] 2025-11-22 12:33:20,652 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-22 07:33:50] 2025-11-22 12:33:20,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:33:50] 2025-11-22 12:33:20,653 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:33:50] 2025-11-22 12:33:20,653 | INFO     | update_server=False
[2025-11-22 07:33:50] 2025-11-22 12:33:20,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:33:50] 2025-11-22 12:33:20,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:33:50] 2025-11-22 12:33:20,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:33:50] 2025-11-22 12:33:20,887 | INFO     | aborting loop
[2025-11-22 07:33:50] 2025-11-22 12:33:21,451 | INFO     | all data control threads have been joined
[2025-11-22 07:33:50] 2025-11-22 12:33:21,472 | INFO     | all payload control threads have been joined
[2025-11-22 07:33:50] 2025-11-22 12:33:21,655 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:21,754 | INFO     | all job control threads have been joined
[2025-11-22 07:33:50] 2025-11-22 12:33:21,892 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:21,999 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,063 | INFO     | [job] validate thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,220 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,380 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,457 | INFO     | [data] control thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,477 | INFO     | [payload] control thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,522 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,659 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,755 | INFO     | [job] control thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,776 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,972 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:22,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:23,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:33:50] 2025-11-22 12:33:23,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:33:50] 2025-11-22 12:33:24,527 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:27,964 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:33:50] 2025-11-22 12:33:36,194 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:33:50] 2025-11-22 12:33:36,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969286883136)>', '<ExcThread(monitor, started 139968840177408)>']
[2025-11-22 07:33:50] 2025-11-22 12:33:41,974 | INFO     | all workflow threads have been joined
[2025-11-22 07:33:50] 2025-11-22 12:33:41,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:33:50] 2025-11-22 12:33:41,975 | INFO     | traces error code: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:41,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:33:50] 2025-11-22 12:33:50,318 | INFO     | PID=29910 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 07:33:50] 2025-11-22 12:33:50,319 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:33:50] 2025-11-22 12:33:50,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:33:50] 2025-11-22 12:33:50,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:33:50] 2025-11-22 12:33:50,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:33:50] 2025-11-22 12:33:50,319 | INFO     | [monitor] control thread has ended
[2025-11-22 07:33:50] 2025-11-22 12:33:50,418 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:33:50] 2025-11-22 12:33:50,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:33:50] 2025-11-22 12:33:50,426 [wrapper] pilotpid: 29910
[2025-11-22 07:33:50] 2025-11-22 12:33:50,430 [wrapper] Pilot exit status: 0
[2025-11-22 07:33:50] 2025-11-22 12:33:50,444 [wrapper] pandaids: 6895329683
[2025-11-22 07:33:50] 2025-11-22 12:33:50,481 [wrapper] cleanup supervisor_pilot 15618 29911
[2025-11-22 07:33:50] 2025-11-22 12:33:50,485 [wrapper] Test setup, not cleaning
[2025-11-22 07:33:50] 2025-11-22 12:33:50,489 [wrapper] apfmon messages muted
[2025-11-22 07:33:50] 2025-11-22 12:33:50,493 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:33:50] 2025-11-22 12:33:50,497 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:33:50]  *** Error codes and diagnostics ***
[2025-11-22 07:33:50]     "exeErrorCode": 0,
[2025-11-22 07:33:50]     "exeErrorDiag": "",
[2025-11-22 07:33:50]     "pilotErrorCode": 0,
[2025-11-22 07:33:50]     "pilotErrorDiag": "",
[2025-11-22 07:33:50]  *** Listing of results directory ***
[2025-11-22 07:33:50] total 1305520
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 14:29 pilot3.tar.gz
[2025-11-22 07:33:50] -rwx------ 1 boincer umatlas     36292 Nov 21 14:37 runpilot2-wrapper.sh
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 14:37 queuedata.json
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas       100 Nov 22 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:33:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 00:30 run_atlas
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas       105 Nov 22 00:30 job.xml
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas 408514910 Nov 22 00:30 EVNT.47483658._000119.pool.root.1
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:30 start_atlas.sh
[2025-11-22 07:33:50] drwxrwx--x 2 boincer umatlas      4096 Nov 22 00:30 shared
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 00:30 input.tar.gz
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas         0 Nov 22 00:30 boinc_lockfile
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 00:30 pandaJob.out
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas        57 Nov 22 00:30 setup.sh.local
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas    989752 Nov 22 00:30 agis_schedconf.cvmfs.json
[2025-11-22 07:33:50] drwx------ 5 boincer umatlas      4096 Nov 22 00:30 pilot3
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas       533 Nov 22 07:25 boinc_task_state.xml
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 07:29 init_data.xml
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas 912989388 Nov 22 07:32 HITS.47556137._001190.pool.root.1
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas        95 Nov 22 07:32 pilot_heartbeat.json
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas      1061 Nov 22 07:33 memory_monitor_summary.json
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas   1526164 Nov 22 07:33 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas   2174561 Nov 22 07:33 log.47556137._001190.job.log.tgz.1
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas      8661 Nov 22 07:33 heartbeat.json
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas        29 Nov 22 07:33 wrapper_checkpoint.txt
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 07:33 boinc_mmap_file
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas       745 Nov 22 07:33 pilotlog.txt
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas   3537699 Nov 22 07:33 log.47556137._001190.job.log.1
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas       353 Nov 22 07:33 output.list
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas       620 Nov 22 07:33 runtime_log
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas   5734400 Nov 22 07:33 result.tar.gz
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 07:33 runtime_log.err
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas       670 Nov 22 07:33 8BiMDmg7lg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZgJKDmraQeGo.diag
[2025-11-22 07:33:50] -rw-r--r-- 1 boincer umatlas     21304 Nov 22 07:33 stderr.txt
[2025-11-22 07:33:50] HITS file was successfully produced:
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas 912989388 Nov 22 07:32 shared/HITS.pool.root.1
[2025-11-22 07:33:50]  *** Contents of shared directory: ***
[2025-11-22 07:33:50] total 1296740
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas 408514910 Nov 22 00:30 ATLAS.root_0
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:30 start_atlas.sh
[2025-11-22 07:33:50] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 00:30 input.tar.gz
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas 912989388 Nov 22 07:32 HITS.pool.root.1
[2025-11-22 07:33:50] -rw------- 1 boincer umatlas   5734400 Nov 22 07:33 result.tar.gz
07:33:52 (26108): run_atlas exited; CPU time 285384.938559
07:33:52 (26108): called boinc_finish(0)

</stderr_txt>
]]>

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