Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:03:06 (2284524): wrapper (7.7.26015): starting
20:03:06 (2284524): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 20:03:06] Arguments: --nthreads 8
[2025-11-22 20:03:06] Threads: 8
[2025-11-22 20:03:06] Checking for CVMFS
[2025-11-22 20:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:03:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:03:06] 2.11.5.0 6031 1811 157776 153181 0 89 2614656 4194305 17365 130560 0 13756484 99.961 365043 434 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-22 20:03:06] CVMFS is ok
[2025-11-22 20:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:03:06] Checking for apptainer binary...
[2025-11-22 20:03:06] apptainer is not installed, using version from CVMFS
[2025-11-22 20:03:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:03:06] mikemint-desktop
[2025-11-22 20:03:06] apptainer works
[2025-11-22 20:03:06] Set ATHENA_PROC_NUMBER=8
[2025-11-22 20:03:06] Set ATHENA_CORE_NUMBER=8
[2025-11-22 20:03:06] Starting ATLAS job with PandaID=6892537918
[2025-11-22 20:03:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:00:01]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:00:01] 2025-11-23 09:59:17,262 | INFO     | fitting pss+swap vs Time
[2025-11-23 11:00:01] 2025-11-23 09:59:17,267 | INFO     | sum of square deviations: 211312193771.80005
[2025-11-23 11:00:01] 2025-11-23 09:59:17,317 | INFO     | sum of deviations: 469606425525.75024
[2025-11-23 11:00:01] 2025-11-23 09:59:17,317 | INFO     | mean x: 1763865044.55
[2025-11-23 11:00:01] 2025-11-23 09:59:17,317 | INFO     | mean y: 2821248.4488636362
[2025-11-23 11:00:01] 2025-11-23 09:59:17,318 | INFO     | intersect: -3917077286.017464
[2025-11-23 11:00:01] 2025-11-23 09:59:17,323 | INFO     | chi2: 14.934461512124521
[2025-11-23 11:00:01] 2025-11-23 09:59:17,324 | INFO     | sum of square deviations: 207730975876.25592
[2025-11-23 11:00:01] 2025-11-23 09:59:17,374 | INFO     | sum of deviations: 778631127595.3833
[2025-11-23 11:00:01] 2025-11-23 09:59:17,374 | INFO     | mean x: 1763864892.056
[2025-11-23 11:00:01] 2025-11-23 09:59:17,374 | INFO     | mean y: 2834407.1554285716
[2025-11-23 11:00:01] 2025-11-23 09:59:17,374 | INFO     | intersect: -6608601870.145836
[2025-11-23 11:00:01] 2025-11-23 09:59:17,379 | INFO     | chi2: 11.162359265495093
[2025-11-23 11:00:01] 2025-11-23 09:59:17,380 | INFO     | current chi2=11.162359265495093 (change=25.257705097482443 %)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,381 | INFO     | sum of square deviations: 204190456418.14816
[2025-11-23 11:00:01] 2025-11-23 09:59:17,419 | INFO     | sum of deviations: 1104070936365.498
[2025-11-23 11:00:01] 2025-11-23 09:59:17,419 | INFO     | mean x: 1763864739.562069
[2025-11-23 11:00:01] 2025-11-23 09:59:17,419 | INFO     | mean y: 2848423.8333333335
[2025-11-23 11:00:01] 2025-11-23 09:59:17,419 | INFO     | intersect: -9534481717.798565
[2025-11-23 11:00:01] 2025-11-23 09:59:17,420 | INFO     | chi2: 7.153850744018399
[2025-11-23 11:00:01] 2025-11-23 09:59:17,421 | INFO     | current chi2=7.153850744018399 (change=35.91094343171458 %)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,422 | INFO     | sum of square deviations: 200690402834.97568
[2025-11-23 11:00:01] 2025-11-23 09:59:17,443 | INFO     | sum of deviations: 1424558976122.53
[2025-11-23 11:00:01] 2025-11-23 09:59:17,443 | INFO     | mean x: 1763864587.068208
[2025-11-23 11:00:01] 2025-11-23 09:59:17,443 | INFO     | mean y: 2862381.7028901735
[2025-11-23 11:00:01] 2025-11-23 09:59:17,443 | INFO     | intersect: -12517562584.70096
[2025-11-23 11:00:01] 2025-11-23 09:59:17,444 | INFO     | chi2: 3.2723897136381574
[2025-11-23 11:00:01] 2025-11-23 09:59:17,445 | INFO     | current chi2=3.2723897136381574 (change=54.256947331836294 %)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,446 | INFO     | sum of square deviations: 197230582564.2371
[2025-11-23 11:00:01] 2025-11-23 09:59:17,467 | INFO     | sum of deviations: 1549297219218.904
[2025-11-23 11:00:01] 2025-11-23 09:59:17,468 | INFO     | mean x: 1763864434.5744185
[2025-11-23 11:00:01] 2025-11-23 09:59:17,468 | INFO     | mean y: 2867877.704651163
[2025-11-23 11:00:01] 2025-11-23 09:59:17,468 | INFO     | intersect: -13852743295.959185
[2025-11-23 11:00:01] 2025-11-23 09:59:17,469 | INFO     | chi2: 2.5669369674562987
[2025-11-23 11:00:01] 2025-11-23 09:59:17,469 | INFO     | current chi2=2.5669369674562987 (change=21.55772410730245 %)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,469 | INFO     | right removable region: 859
[2025-11-23 11:00:01] 2025-11-23 09:59:17,470 | INFO     | sum of square deviations: 207730465673.36575
[2025-11-23 11:00:01] 2025-11-23 09:59:17,491 | INFO     | sum of deviations: 239112866192.11523
[2025-11-23 11:00:01] 2025-11-23 09:59:17,492 | INFO     | mean x: 1763865197.0548573
[2025-11-23 11:00:01] 2025-11-23 09:59:17,492 | INFO     | mean y: 2831048.9142857143
[2025-11-23 11:00:01] 2025-11-23 09:59:17,492 | INFO     | intersect: -2027506010.5880249
[2025-11-23 11:00:01] 2025-11-23 09:59:17,493 | INFO     | chi2: 12.874951463194098
[2025-11-23 11:00:01] 2025-11-23 09:59:17,493 | INFO     | current chi2=12.874951463194098 (change=13.790320108016035 %)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,493 | INFO     | left removable region: 10
[2025-11-23 11:00:01] 2025-11-23 09:59:17,494 | INFO     | sum of square deviations: 189758638817.3912
[2025-11-23 11:00:01] 2025-11-23 09:59:17,514 | INFO     | sum of deviations: 1272633720455.3623
[2025-11-23 11:00:01] 2025-11-23 09:59:17,514 | INFO     | mean x: 1763864709.0812721
[2025-11-23 11:00:01] 2025-11-23 09:59:17,514 | INFO     | mean y: 2882052.588928151
[2025-11-23 11:00:01] 2025-11-23 09:59:17,514 | INFO     | intersect: -11826638442.961155
[2025-11-23 11:00:01] 2025-11-23 09:59:17,515 | INFO     | chi2: 0.2547637857517527
[2025-11-23 11:00:01] 2025-11-23 09:59:17,516 | INFO     | current memory leak: 6.71 B/s (using 849 data points, chi2=0.25)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,516 | INFO     | could have reported an average CPU frequency of 2354 MHz (32 samples)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | ..............................
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . Timing measurements:
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . get job = 0 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . initial setup = 1 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . payload setup = 7 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . stage-in = 0 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . payload execution = 53667 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,517 | INFO     | . stage-out = 5 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,518 | INFO     | . log creation = 2 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,518 | INFO     | ..............................
[2025-11-23 11:00:01] 2025-11-23 09:59:17,759 | INFO     | 
[2025-11-23 11:00:01] 2025-11-23 09:59:17,759 | INFO     | job summary report
[2025-11-23 11:00:01] 2025-11-23 09:59:17,759 | INFO     | --------------------------------------------------
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | PanDA job id: 6892537918
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | task id: 47493029
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | errors: (none)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | pilot state: finished 
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | transexitcode: 0
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | exeerrorcode: 0
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | exeerrordiag: 
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | exitcode: 0
[2025-11-23 11:00:01] 2025-11-23 09:59:17,760 | INFO     | exitmsg: OK
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | cpuconsumptiontime: 270950 s
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | nevents: 1000
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | neventsw: 0
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | pid: 2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | pgrp: 2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | corecount: 8
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | event service: False
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | sizes: {0: 2298797, 1: 2298797, 6: 2299087, 11: 2299115, 53679: 2348508, 53680: 2348507, 53685: 2357699, 53689: 2357755, 53739: 2358001}
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | --------------------------------------------------
[2025-11-23 11:00:01] 2025-11-23 09:59:17,761 | INFO     | 
[2025-11-23 11:00:01] 2025-11-23 09:59:17,762 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-23 11:00:01] 2025-11-23 09:59:17,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:00:01] 2025-11-23 09:59:17,838 | INFO     | job 6892537918 has completed (purged errors)
[2025-11-23 11:00:01] 2025-11-23 09:59:17,838 | INFO     | overall cleanup function is called
[2025-11-23 11:00:01] 2025-11-23 09:59:18,863 | INFO     | --- collectZombieJob: --- 10, [2322123]
[2025-11-23 11:00:01] 2025-11-23 09:59:18,863 | INFO     | zombie collector waiting for pid 2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:18,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:00:01] 2025-11-23 09:59:18,864 | INFO     | collected zombie processes
[2025-11-23 11:00:01] 2025-11-23 09:59:18,864 | INFO     | will attempt to kill all subprocesses of pid=2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:19,952 | INFO     | process IDs to be killed: [2322123] (in reverse order)
[2025-11-23 11:00:01] 2025-11-23 09:59:20,905 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:00:01] 2025-11-23 09:59:20,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:00:01] 2025-11-23 09:59:20,950 | INFO     | did not find any defunct processes belonging to 2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:20,987 | INFO     | did not find any defunct processes belonging to 2322123
[2025-11-23 11:00:01] 2025-11-23 09:59:21,023 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:00:01] 2025-11-23 09:59:21,023 | INFO     | ready for new job
[2025-11-23 11:00:01] 2025-11-23 09:59:21,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:00:01] 2025-11-23 09:59:21,029 | INFO     | ***************************************
[2025-11-23 11:00:01] 2025-11-23 09:59:21,029 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:00:01] 2025-11-23 09:59:21,029 | INFO     | ***************************************
[2025-11-23 11:00:01] 2025-11-23 09:59:21,029 | INFO     | 
[2025-11-23 11:00:01] 2025-11-23 09:59:21,057 | INFO     | architecture information:
[2025-11-23 11:00:01] 2025-11-23 09:59:21,071 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:00:01] 2025-11-23 09:59:21,105 | INFO     | cat /etc/os-release:
[2025-11-23 11:00:01] NAME="CentOS Linux"
[2025-11-23 11:00:01] VERSION="7 (Core)"
[2025-11-23 11:00:01] ID="centos"
[2025-11-23 11:00:01] ID_LIKE="rhel fedora"
[2025-11-23 11:00:01] VERSION_ID="7"
[2025-11-23 11:00:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:00:01] ANSI_COLOR="0;31"
[2025-11-23 11:00:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:00:01] HOME_URL="https://www.centos.org/"
[2025-11-23 11:00:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:00:01] 
[2025-11-23 11:00:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:00:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:00:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:00:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:00:01] 
[2025-11-23 11:00:01] 2025-11-23 09:59:21,105 | INFO     | ***************************************
[2025-11-23 11:00:01] 2025-11-23 09:59:21,607 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-23 11:00:01] 2025-11-23 09:59:21,661 | INFO     | sufficient remaining disk space (82133909504 B)
[2025-11-23 11:00:01] 2025-11-23 09:59:21,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:00:01] 2025-11-23 09:59:21,661 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:00:01] 2025-11-23 09:59:21,662 | INFO     | update_server=False
[2025-11-23 11:00:01] 2025-11-23 09:59:21,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:00:01] 2025-11-23 09:59:21,699 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 11:00:01] 2025-11-23 09:59:21,699 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 11:00:01] 2025-11-23 09:59:21,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:00:01] 2025-11-23 09:59:21,699 | INFO     | will abort loop
[2025-11-23 11:00:01] 2025-11-23 09:59:22,059 | INFO     | all data control threads have been joined
[2025-11-23 11:00:01] 2025-11-23 09:59:22,643 | INFO     | all job control threads have been joined
[2025-11-23 11:00:01] 2025-11-23 09:59:22,667 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:22,691 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:22,703 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:22,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:00:01] 2025-11-23 09:59:22,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:00:01] 2025-11-23 09:59:22,813 | INFO     | all payload control threads have been joined
[2025-11-23 11:00:01] 2025-11-23 09:59:22,875 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:22,903 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,063 | INFO     | [data] control thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,335 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,643 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,647 | INFO     | [job] control thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:00:01] 2025-11-23 09:59:23,787 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,819 | INFO     | [payload] control thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,835 | INFO     | [job] validate thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:23,951 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:24,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:24,731 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:27,731 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:00:01] 2025-11-23 09:59:50,100 | INFO     | PID=2296720 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:00:01] 2025-11-23 09:59:50,100 | INFO     | .. there are 25 such processes running
[2025-11-23 11:00:01] 2025-11-23 09:59:50,101 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:00:01] 2025-11-23 09:59:50,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:00:01] 2025-11-23 09:59:50,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:00:01] 2025-11-23 09:59:53,179 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:00:01] 2025-11-23 09:59:55,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054442436416)>', '<ExcThread(monitor, started 140053716137728)>']
[2025-11-23 11:00:01] 2025-11-23 09:59:55,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:00:01] 2025-11-23 09:59:55,123 | INFO     | [monitor] control thread has ended
[2025-11-23 11:00:01] 2025-11-23 10:00:00,027 | INFO     | all workflow threads have been joined
[2025-11-23 11:00:01] 2025-11-23 10:00:00,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:00:01] 2025-11-23 10:00:00,027 | INFO     | traces error code: 0
[2025-11-23 11:00:01] 2025-11-23 10:00:00,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:00:01] 2025-11-23 10:00:00,235 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:00:01] 2025-11-23 10:00:00,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:00:01] 2025-11-23 10:00:00,258 [wrapper] pilotpid: 2296720
[2025-11-23 11:00:01] 2025-11-23 10:00:00,262 [wrapper] Pilot exit status: 0
[2025-11-23 11:00:01] 2025-11-23 10:00:00,307 [wrapper] pandaids: 6892537918
[2025-11-23 11:00:01] 2025-11-23 10:00:00,607 [wrapper] cleanup supervisor_pilot  428371 2296721
[2025-11-23 11:00:01] 2025-11-23 10:00:00,663 [wrapper] Test setup, not cleaning
[2025-11-23 11:00:01] 2025-11-23 10:00:00,707 [wrapper] apfmon messages muted
[2025-11-23 11:00:01] 2025-11-23 10:00:00,763 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:00:01] 2025-11-23 10:00:00,819 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:00:01]  *** Error codes and diagnostics ***
[2025-11-23 11:00:01]     "exeErrorCode": 0,
[2025-11-23 11:00:01]     "exeErrorDiag": "",
[2025-11-23 11:00:01]     "pilotErrorCode": 0,
[2025-11-23 11:00:01]     "pilotErrorDiag": "",
[2025-11-23 11:00:01]  *** Listing of results directory ***
[2025-11-23 11:00:01] insgesamt 1320984
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:27 queuedata.json
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:27 pilot3.tar.gz
[2025-11-23 11:00:01] -rwx------ 1 boinc boinc     36292 Nov 19 08:28 runpilot2-wrapper.sh
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc       100 Nov 22 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:00:01] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 20:02 run_atlas
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc       105 Nov 22 20:02 job.xml
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc 411592068 Nov 22 20:03 EVNT.47493027._000223.pool.root.1
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc     15120 Nov 22 20:03 start_atlas.sh
[2025-11-23 11:00:01] drwxrwx--x 2 boinc boinc      4096 Nov 22 20:03 shared
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc    590098 Nov 22 20:03 input.tar.gz
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc      6665 Nov 22 20:03 init_data.xml
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc         0 Nov 22 20:03 boinc_lockfile
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc      2770 Nov 22 20:03 pandaJob.out
[2025-11-23 11:00:01] -rw------- 1 boinc boinc    989784 Nov 22 20:03 agis_schedconf.cvmfs.json
[2025-11-23 11:00:01] drwx------ 5 boinc boinc      4096 Nov 22 20:03 pilot3
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc       533 Nov 23 10:33 boinc_task_state.xml
[2025-11-23 11:00:01] -rw------- 1 boinc boinc 919208128 Nov 23 10:57 HITS.47493029._002181.pool.root.1
[2025-11-23 11:00:01] -rw------- 1 boinc boinc      1041 Nov 23 10:58 memory_monitor_summary.json
[2025-11-23 11:00:01] -rw------- 1 boinc boinc   1526164 Nov 23 10:58 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:00:01] -rw------- 1 boinc boinc   2037816 Nov 23 10:58 log.47493029._002181.job.log.tgz.1
[2025-11-23 11:00:01] -rw------- 1 boinc boinc        95 Nov 23 10:58 pilot_heartbeat.json
[2025-11-23 11:00:01] -rw------- 1 boinc boinc      8573 Nov 23 10:59 heartbeat.json
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc      8192 Nov 23 10:59 boinc_mmap_file
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc        29 Nov 23 10:59 wrapper_checkpoint.txt
[2025-11-23 11:00:01] -rw------- 1 boinc boinc      5017 Nov 23 11:00 pilotlog.txt
[2025-11-23 11:00:01] -rw------- 1 boinc boinc   6939103 Nov 23 11:00 log.47493029._002181.job.log.1
[2025-11-23 11:00:01] -rw------- 1 boinc boinc       353 Nov 23 11:00 output.list
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc       620 Nov 23 11:00 runtime_log
[2025-11-23 11:00:01] -rw------- 1 boinc boinc   9000960 Nov 23 11:00 result.tar.gz
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc      8843 Nov 23 11:00 runtime_log.err
[2025-11-23 11:00:01] -rw------- 1 boinc boinc       673 Nov 23 11:00 C8dNDmBnrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm90FKDmR2dD2m.diag
[2025-11-23 11:00:01] -rw-r--r-- 1 boinc boinc     20887 Nov 23 11:00 stderr.txt
[2025-11-23 11:00:01] HITS file was successfully produced:
[2025-11-23 11:00:01] -rw------- 1 boinc boinc 919208128 Nov 23 10:57 shared/HITS.pool.root.1
[2025-11-23 11:00:01]  *** Contents of shared directory: ***
[2025-11-23 11:00:01] insgesamt 1309012
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc 411592068 Nov 22 20:03 ATLAS.root_0
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc     15120 Nov 22 20:03 start_atlas.sh
[2025-11-23 11:00:01] -rw-r--r-- 2 boinc boinc    590098 Nov 22 20:03 input.tar.gz
[2025-11-23 11:00:01] -rw------- 1 boinc boinc 919208128 Nov 23 10:57 HITS.pool.root.1
[2025-11-23 11:00:01] -rw------- 1 boinc boinc   9000960 Nov 23 11:00 result.tar.gz
11:00:02 (2284524): run_atlas exited; CPU time 273562.935607
11:00:02 (2284524): called boinc_finish(0)

</stderr_txt>
]]>

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