Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:00 (609350): wrapper (7.7.26015): starting
21:49:00 (609350): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 21:49:00] Arguments: --nthreads 12
[2025-11-21 21:49:00] Threads: 12
[2025-11-21 21:49:00] Checking for CVMFS
[2025-11-21 21:49:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:49:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:49:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:49:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:49:01] 2.11.5.0 299689 21926 162216 153161 3 287 29684580 45568000 12270 130560 0 226025178 99.814 120821368 22128 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-21 21:49:01] CVMFS is ok
[2025-11-21 21:49:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:49:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 21:49:01] Further information can be found at the LHC@home message board.
[2025-11-21 21:49:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:49:01] Checking for apptainer binary...
[2025-11-21 21:49:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:49:01] Running /usr/bin/apptainer --version
[2025-11-21 21:49:01] apptainer version 1.4.1-1.el9
[2025-11-21 21:49:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:49:01] wns0056.triumf.lcg
[2025-11-21 21:49:01] apptainer works
[2025-11-21 21:49:01] Set ATHENA_PROC_NUMBER=12
[2025-11-21 21:49:01] Set ATHENA_CORE_NUMBER=12
[2025-11-21 21:49:01] Starting ATLAS job with PandaID=6895329398
[2025-11-21 21:49:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:53:17]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . Timing measurements:
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . get job = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . initial setup = 2 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload setup = 5 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-in = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload execution = 52 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-out = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . log creation = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | ..............................
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895329398/pilotlog.txt
[2025-11-21 21:53:17] 2025-11-22 05:52:29,543 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 21:53:17] - Log from pilotlog.txt -
[2025-11-21 21:53:17] 2025-11-22 05:52:29,528 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:53:17] 2025-11-22 05:52:29,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | found no stored workdir sizes
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | wrong length of table data, x=[1763790575.0], y=[880.0] (must be same and length>=4)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | ..............................
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . Timing measurements:
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . get job = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . initial setup = 2 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload setup = 5 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-in = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload execution = 52 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-out = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . log creation = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | ..............................
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895329398/pilotlog.txt
[2025-11-21 21:53:17] 2025-11-22 05:52:29,544 | WARNING  | 
[2025-11-21 21:53:17] [begin log extracts]
[2025-11-21 21:53:17] - Log from pilotlog.txt -
[2025-11-21 21:53:17] 2025-11-22 05:52:29,528 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:53:17] 2025-11-22 05:52:29,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | found no stored workdir sizes
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 21:53:17] 2025-11-22 05:52:29,529 | WARNING  | wrong length of table data, x=[1763790575.0], y=[880.0] (must be same and length>=4)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | ..............................
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . Timing measurements:
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . get job = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . initial setup = 2 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload setup = 5 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-in = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . payload execution = 52 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . stage-out = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | . log creation = 0 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,531 | INFO     | ..............................
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:53:17] 2025-11-22 05:52:29,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895329398/pilotlog.txt
[2025-11-21 21:53:17] [end log extracts]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,544 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,544 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | 
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | job summary report
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | --------------------------------------------------
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | PanDA job id: 6895329398
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | task id: 47556137
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 21:50:19,120 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | pilot state: failed 
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | transexitcode: 65
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | exeerrorcode: 65
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 21:53:17] 2025-11-22 05:52:29,602 | INFO     | exitcode: 65
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | cpuconsumptiontime: 42 s
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | nevents: 0
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | neventsw: 0
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | pid: 619561
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | pgrp: 619561
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | corecount: 12
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | event service: False
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | sizes: {0: 2298803, 4: 2299065, 11: 2299093, 61: 2324457, 62: 2328747, 64: 2328775, 185: 2329097}
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | --------------------------------------------------
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | 
[2025-11-21 21:53:17] 2025-11-22 05:52:29,603 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:53:17] 2025-11-22 05:52:29,619 | INFO     | job 6895329398 has completed (purged errors)
[2025-11-21 21:53:17] 2025-11-22 05:52:29,619 | INFO     | overall cleanup function is called
[2025-11-21 21:53:17] 2025-11-22 05:52:30,203 | INFO     | PID=613008 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 21:53:17] 2025-11-22 05:52:30,204 | INFO     | .. there are 16 such processes running
[2025-11-21 21:53:17] 2025-11-22 05:52:30,626 | INFO     | --- collectZombieJob: --- 10, [619561]
[2025-11-21 21:53:17] 2025-11-22 05:52:30,627 | INFO     | zombie collector waiting for pid 619561
[2025-11-21 21:53:17] 2025-11-22 05:52:30,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:53:17] 2025-11-22 05:52:30,627 | INFO     | collected zombie processes
[2025-11-21 21:53:17] 2025-11-22 05:52:30,627 | INFO     | will attempt to kill all subprocesses of pid=619561
[2025-11-21 21:53:17] 2025-11-22 05:52:30,764 | INFO     | process IDs to be killed: [619561] (in reverse order)
[2025-11-21 21:53:17] 2025-11-22 05:52:30,818 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:53:17] 2025-11-22 05:52:30,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:53:17] 2025-11-22 05:52:30,824 | INFO     | did not find any defunct processes belonging to 619561
[2025-11-21 21:53:17] 2025-11-22 05:52:30,829 | INFO     | did not find any defunct processes belonging to 619561
[2025-11-21 21:53:17] 2025-11-22 05:52:30,830 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:53:17] 2025-11-22 05:52:30,830 | INFO     | ready for new job
[2025-11-21 21:53:17] 2025-11-22 05:52:30,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:53:17] 2025-11-22 05:52:30,831 | INFO     | ***************************************
[2025-11-21 21:53:17] 2025-11-22 05:52:30,831 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:53:17] 2025-11-22 05:52:30,831 | INFO     | ***************************************
[2025-11-21 21:53:17] 2025-11-22 05:52:30,831 | INFO     | 
[2025-11-21 21:53:17] 2025-11-22 05:52:30,833 | INFO     | architecture information:
[2025-11-21 21:53:17] 2025-11-22 05:52:30,834 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:53:17] 2025-11-22 05:52:30,844 | INFO     | cat /etc/os-release:
[2025-11-21 21:53:17] NAME="CentOS Linux"
[2025-11-21 21:53:17] VERSION="7 (Core)"
[2025-11-21 21:53:17] ID="centos"
[2025-11-21 21:53:17] ID_LIKE="rhel fedora"
[2025-11-21 21:53:17] VERSION_ID="7"
[2025-11-21 21:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:53:17] ANSI_COLOR="0;31"
[2025-11-21 21:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:53:17] HOME_URL="https://www.centos.org/"
[2025-11-21 21:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:53:17] 
[2025-11-21 21:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:53:17] 
[2025-11-21 21:53:17] 2025-11-22 05:52:30,844 | INFO     | ***************************************
[2025-11-21 21:53:17] 2025-11-22 05:52:31,347 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 21:53:17] 2025-11-22 05:52:31,359 | INFO     | sufficient remaining disk space (2014755946496 B)
[2025-11-21 21:53:17] 2025-11-22 05:52:31,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:53:17] 2025-11-22 05:52:31,360 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:53:17] 2025-11-22 05:52:31,360 | INFO     | update_server=False
[2025-11-21 21:53:17] 2025-11-22 05:52:31,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:53:17] 2025-11-22 05:52:31,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:53:17] 2025-11-22 05:52:31,382 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 21:53:17] 2025-11-22 05:52:31,383 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 21:53:17] 2025-11-22 05:52:31,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:53:17] 2025-11-22 05:52:31,383 | INFO     | will abort loop
[2025-11-21 21:53:17] 2025-11-22 05:52:31,502 | INFO     | all job control threads have been joined
[2025-11-21 21:53:17] 2025-11-22 05:52:31,862 | INFO     | all payload control threads have been joined
[2025-11-21 21:53:17] 2025-11-22 05:52:32,178 | INFO     | all data control threads have been joined
[2025-11-21 21:53:17] 2025-11-22 05:52:32,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:53:17] 2025-11-22 05:52:32,365 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,365 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,388 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:53:17] 2025-11-22 05:52:32,507 | INFO     | [job] control thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,697 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:32,867 | INFO     | [payload] control thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,023 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,039 | INFO     | [job] validate thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,172 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,184 | INFO     | [data] control thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,233 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,299 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:33,722 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:34,499 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:52:36,222 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:53:17] 2025-11-22 05:53:02,456 | INFO     | PID=613008 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 21:53:17] 2025-11-22 05:53:02,457 | INFO     | .. there are 16 such processes running
[2025-11-21 21:53:17] 2025-11-22 05:53:02,457 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:53:17] 2025-11-22 05:53:02,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:53:17] 2025-11-22 05:53:02,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:53:17] 2025-11-22 05:53:10,424 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:53:17] 2025-11-22 05:53:12,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600337585984)>', '<ExcThread(monitor, started 140599940327168)>']
[2025-11-21 21:53:17] 2025-11-22 05:53:12,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:53:17] 2025-11-22 05:53:12,507 | INFO     | [monitor] control thread has ended
[2025-11-21 21:53:17] 2025-11-22 05:53:17,094 | INFO     | all workflow threads have been joined
[2025-11-21 21:53:17] 2025-11-22 05:53:17,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:53:17] 2025-11-22 05:53:17,095 | INFO     | traces error code: 0
[2025-11-21 21:53:17] 2025-11-22 05:53:17,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:53:17] 2025-11-22 05:53:17,241 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:53:17] 2025-11-22 05:53:17,244 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:53:17] 2025-11-22 05:53:17,246 [wrapper] pilotpid: 613008
[2025-11-21 21:53:17] 2025-11-22 05:53:17,248 [wrapper] Pilot exit status: 0
[2025-11-21 21:53:17] 2025-11-22 05:53:17,256 [wrapper] pandaids: 6895329398
[2025-11-21 21:53:17] 2025-11-22 05:53:17,291 [wrapper] cleanup supervisor_pilot  613014 613009
[2025-11-21 21:53:17] 2025-11-22 05:53:17,293 [wrapper] Test setup, not cleaning
[2025-11-21 21:53:17] 2025-11-22 05:53:17,296 [wrapper] apfmon messages muted
[2025-11-21 21:53:17] 2025-11-22 05:53:17,298 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:53:17] 2025-11-22 05:53:17,300 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:53:17]  *** Error codes and diagnostics ***
[2025-11-21 21:53:17]     "exeErrorCode": 65,
[2025-11-21 21:53:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 21:53:17]     "pilotErrorCode": 1305,
[2025-11-21 21:53:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 21:53:17]  *** Listing of results directory ***
[2025-11-21 21:53:17] total 404260
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc    576529 Nov 21 10:54 pilot3.tar.gz
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc      5112 Nov 21 11:25 queuedata.json
[2025-11-21 21:53:17] -rwx------. 1 boinc boinc     36292 Nov 21 11:26 runpilot2-wrapper.sh
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:53:17] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:49 run_atlas
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:49 job.xml
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc 409763229 Nov 21 21:49 EVNT.47483658._000116.pool.root.1
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc    590102 Nov 21 21:49 input.tar.gz
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc      6594 Nov 21 21:49 init_data.xml
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc     15847 Nov 21 21:49 start_atlas.sh
[2025-11-21 21:53:17] drwxrwx--x. 2 boinc boinc      4096 Nov 21 21:49 shared
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:49 boinc_lockfile
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc      2785 Nov 21 21:49 pandaJob.out
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc    989752 Nov 21 21:49 agis_schedconf.cvmfs.json
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc   1526164 Nov 21 21:49 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:53:17] drwx------. 5 boinc boinc      4096 Nov 21 21:49 pilot3
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc       523 Nov 21 21:50 boinc_task_state.xml
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc       957 Nov 21 21:50 memory_monitor_summary.json
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc     47392 Nov 21 21:50 log.47556137._001153.job.log.tgz.1
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc        95 Nov 21 21:52 pilot_heartbeat.json
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc     10303 Nov 21 21:52 heartbeat.json
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc        23 Nov 21 21:53 wrapper_checkpoint.txt
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:53 boinc_mmap_file
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc      5008 Nov 21 21:53 pilotlog.txt
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc     92365 Nov 21 21:53 log.47556137._001153.job.log.1
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc       186 Nov 21 21:53 output.list
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:53 runtime_log
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc    163840 Nov 21 21:53 result.tar.gz
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc      8636 Nov 21 21:53 runtime_log.err
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc       645 Nov 21 21:53 RCMODmrwlg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqfJKDmDbXkEm.diag
[2025-11-21 21:53:17] -rw-r--r--. 1 boinc boinc     22334 Nov 21 21:53 stderr.txt
[2025-11-21 21:53:17] No HITS result produced
[2025-11-21 21:53:17]  *** Contents of shared directory: ***
[2025-11-21 21:53:17] total 400920
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc 409763229 Nov 21 21:49 ATLAS.root_0
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc    590102 Nov 21 21:49 input.tar.gz
[2025-11-21 21:53:17] -rw-r--r--. 2 boinc boinc     15847 Nov 21 21:49 start_atlas.sh
[2025-11-21 21:53:17] -rw-------. 1 boinc boinc    163840 Nov 21 21:53 result.tar.gz
21:53:18 (609350): run_atlas exited; CPU time 39.527644
21:53:18 (609350): called boinc_finish(0)

</stderr_txt>
]]>

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