Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:56:44 (25266): wrapper (7.7.26015): starting
23:56:44 (25266): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:56:44] Arguments: --nthreads 8
[2025-11-24 23:56:44] Threads: 8
[2025-11-24 23:56:44] Checking for CVMFS
[2025-11-24 23:56:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:56:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:56:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:56:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:56:47] 2.11.2.0 11529 220279 138996 153261 2 85 22614775 25165825 1027 130560 9 91844967 99.893 40607463 2521 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 23:56:47] CVMFS is ok
[2025-11-24 23:56:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:56:47] Checking for apptainer binary...
[2025-11-24 23:56:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:56:47] Running /usr/bin/apptainer --version
[2025-11-24 23:56:47] apptainer version 1.3.2-1.el7
[2025-11-24 23:56:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:56:59] cg-vwn354.simple-grid.lan
[2025-11-24 23:56:59] apptainer works
[2025-11-24 23:56:59] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:56:59] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:56:59] Starting ATLAS job with PandaID=6894289669
[2025-11-24 23:56:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:32:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:32:31] 2025-11-25 23:31:43,507 | INFO     | time since job start (88214s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:43,509 | INFO     | monitor loop #5936: job 0:6894289669 is in state 'finished'
[2025-11-26 00:32:31] 2025-11-25 23:31:43,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:32:31] 2025-11-25 23:31:45,520 | INFO     | time since job start (88216s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:46,019 | INFO     | monitor loop #5937: job 0:6894289669 is in state 'finished'
[2025-11-26 00:32:31] 2025-11-25 23:31:46,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:32:31] 2025-11-25 23:31:47,534 | INFO     | time since job start (88218s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:48,525 | INFO     | monitor loop #5938: job 0:6894289669 is in state 'finished'
[2025-11-26 00:32:31] 2025-11-25 23:31:48,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:32:31] 2025-11-25 23:31:49,544 | INFO     | time since job start (88220s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:51,037 | INFO     | monitor loop #5939: job 0:6894289669 is in state 'finished'
[2025-11-26 00:32:31] 2025-11-25 23:31:51,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:32:31] 2025-11-25 23:31:51,552 | INFO     | time since job start (88222s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:52,654 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:32:31] 2025-11-25 23:31:52,655 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:32:31] 2025-11-25 23:31:52,657 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894289669/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:32:31] 2025-11-25 23:31:52,658 | INFO     | extracted standard info from prmon json
[2025-11-26 00:32:31] 2025-11-25 23:31:52,658 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:32:31] 2025-11-25 23:31:52,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:32:31] 2025-11-25 23:31:52,686 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:32:31] 2025-11-25 23:31:52,688 | INFO     | sum of square deviations: 918214888766.8346
[2025-11-26 00:32:31] 2025-11-25 23:31:52,765 | INFO     | sum of deviations: 3681681804855.192
[2025-11-26 00:32:31] 2025-11-25 23:31:52,766 | INFO     | mean x: 1764069616.6977715
[2025-11-26 00:32:31] 2025-11-25 23:31:52,766 | INFO     | mean y: 2826728.36908078
[2025-11-26 00:32:31] 2025-11-25 23:31:52,766 | INFO     | intersect: -7070400998.330623
[2025-11-26 00:32:31] 2025-11-25 23:31:52,768 | INFO     | chi2: 32.95754205919338
[2025-11-26 00:32:31] 2025-11-25 23:31:52,770 | INFO     | sum of square deviations: 908657448104.6348
[2025-11-26 00:32:31] 2025-11-25 23:31:52,824 | INFO     | sum of deviations: 4140501997874.322
[2025-11-26 00:32:31] 2025-11-25 23:31:52,824 | INFO     | mean x: 1764069464.2019567
[2025-11-26 00:32:31] 2025-11-25 23:31:52,825 | INFO     | mean y: 2834047.9608665267
[2025-11-26 00:32:31] 2025-11-25 23:31:52,825 | INFO     | intersect: -8035545163.207159
[2025-11-26 00:32:31] 2025-11-25 23:31:52,826 | INFO     | chi2: 29.893050029967345
[2025-11-26 00:32:31] 2025-11-25 23:31:52,826 | INFO     | current chi2=29.893050029967345 (change=9.298302718455323 %)
[2025-11-26 00:32:31] 2025-11-25 23:31:52,827 | INFO     | right removable region: 1430
[2025-11-26 00:32:31] 2025-11-25 23:31:52,829 | INFO     | sum of square deviations: 908656398904.6335
[2025-11-26 00:32:31] 2025-11-25 23:31:52,964 | INFO     | sum of deviations: 3073760445171.637
[2025-11-26 00:32:31] 2025-11-25 23:31:52,965 | INFO     | mean x: 1764069769.2019567
[2025-11-26 00:32:31] 2025-11-25 23:31:52,965 | INFO     | mean y: 2836427.2711390634
[2025-11-26 00:32:31] 2025-11-25 23:31:52,965 | INFO     | intersect: -5964576431.574666
[2025-11-26 00:32:31] 2025-11-25 23:31:52,967 | INFO     | chi2: 27.994735426816753
[2025-11-26 00:32:31] 2025-11-25 23:31:52,967 | INFO     | current chi2=27.994735426816753 (change=15.058181897980072 %)
[2025-11-26 00:32:31] 2025-11-25 23:31:52,967 | INFO     | left removable region: 10
[2025-11-26 00:32:31] 2025-11-25 23:31:52,969 | INFO     | sum of square deviations: 887862941843.6176
[2025-11-26 00:32:31] 2025-11-25 23:31:53,027 | INFO     | sum of deviations: 3079873980945.337
[2025-11-26 00:32:31] 2025-11-25 23:31:53,028 | INFO     | mean x: 1764069738.7112677
[2025-11-26 00:32:31] 2025-11-25 23:31:53,028 | INFO     | mean y: 2854404.3105633804
[2025-11-26 00:32:31] 2025-11-25 23:31:53,028 | INFO     | intersect: -6116459999.721434
[2025-11-26 00:32:31] 2025-11-25 23:31:53,030 | INFO     | chi2: 20.148628235776147
[2025-11-26 00:32:31] 2025-11-25 23:31:53,030 | INFO     | current memory leak: 3.47 B/s (using 1420 data points, chi2=20.15)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,032 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,032 | INFO     | ..............................
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . Timing measurements:
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . get job = 0 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . initial setup = 7 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . payload setup = 182 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . stage-in = 0 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . payload execution = 87717 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . stage-out = 6 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,033 | INFO     | . log creation = 2 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,034 | INFO     | ..............................
[2025-11-26 00:32:31] 2025-11-25 23:31:53,176 | INFO     | 
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | job summary report
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | --------------------------------------------------
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | PanDA job id: 6894289669
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | task id: 47533967
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | errors: (none)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | pilot state: finished 
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | transexitcode: 0
[2025-11-26 00:32:31] 2025-11-25 23:31:53,177 | INFO     | exeerrorcode: 0
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | exeerrordiag: 
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | exitcode: 0
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | exitmsg: OK
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | cpuconsumptiontime: 336186 s
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | nevents: 1000
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | neventsw: 0
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | pid: 3106
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | pgrp: 3106
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | corecount: 8
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | event service: False
[2025-11-26 00:32:31] 2025-11-25 23:31:53,178 | INFO     | sizes: {0: 2283380, 1: 2284065, 2: 2284264, 13: 2284264, 23: 2284320, 34: 2284348, 45: 2284504, 56: 2284532, 66: 2284560, 77: 2284588, 88: 2284644, 99: 2284952, 10
[2025-11-26 00:32:31] 2025-11-25 23:31:53,179 | INFO     | --------------------------------------------------
[2025-11-26 00:32:31] 2025-11-25 23:31:53,179 | INFO     | 
[2025-11-26 00:32:31] 2025-11-25 23:31:53,179 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-26 00:32:31] 2025-11-25 23:31:53,568 | INFO     | time since job start (88224s) is within the limit (172800.0s)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:32:31] 2025-11-25 23:31:53,732 | INFO     | job 6894289669 has completed (purged errors)
[2025-11-26 00:32:31] 2025-11-25 23:31:53,732 | INFO     | overall cleanup function is called
[2025-11-26 00:32:31] 2025-11-25 23:31:54,755 | INFO     | --- collectZombieJob: --- 10, [3106]
[2025-11-26 00:32:31] 2025-11-25 23:31:54,756 | INFO     | zombie collector waiting for pid 3106
[2025-11-26 00:32:31] 2025-11-25 23:31:54,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:32:31] 2025-11-25 23:31:54,756 | INFO     | collected zombie processes
[2025-11-26 00:32:31] 2025-11-25 23:31:54,756 | INFO     | will attempt to kill all subprocesses of pid=3106
[2025-11-26 00:32:31] 2025-11-25 23:31:54,925 | INFO     | process IDs to be killed: [3106] (in reverse order)
[2025-11-26 00:32:31] 2025-11-25 23:31:56,224 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:32:31] 2025-11-25 23:31:56,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:32:31] 2025-11-25 23:31:56,229 | INFO     | did not find any defunct processes belonging to 3106
[2025-11-26 00:32:31] 2025-11-25 23:31:56,232 | INFO     | did not find any defunct processes belonging to 3106
[2025-11-26 00:32:31] 2025-11-25 23:31:56,290 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:32:31] 2025-11-25 23:31:56,290 | INFO     | ready for new job
[2025-11-26 00:32:31] 2025-11-25 23:31:56,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:32:31] 2025-11-25 23:31:56,297 | INFO     | ***************************************
[2025-11-26 00:32:31] 2025-11-25 23:31:56,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:32:31] 2025-11-25 23:31:56,297 | INFO     | ***************************************
[2025-11-26 00:32:31] 2025-11-25 23:31:56,298 | INFO     | 
[2025-11-26 00:32:31] 2025-11-25 23:31:56,298 | INFO     | pilot is running in a VM
[2025-11-26 00:32:31] 2025-11-25 23:31:56,298 | INFO     | architecture information:
[2025-11-26 00:32:31] 2025-11-25 23:31:56,308 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:32:31] 2025-11-25 23:31:56,633 | INFO     | cat /etc/os-release:
[2025-11-26 00:32:31] NAME="CentOS Linux"
[2025-11-26 00:32:31] VERSION="7 (Core)"
[2025-11-26 00:32:31] ID="centos"
[2025-11-26 00:32:31] ID_LIKE="rhel fedora"
[2025-11-26 00:32:31] VERSION_ID="7"
[2025-11-26 00:32:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:32:31] ANSI_COLOR="0;31"
[2025-11-26 00:32:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:32:31] HOME_URL="https://www.centos.org/"
[2025-11-26 00:32:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:32:31] 
[2025-11-26 00:32:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:32:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:32:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:32:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:32:31] 
[2025-11-26 00:32:31] 2025-11-25 23:31:56,633 | INFO     | ***************************************
[2025-11-26 00:32:31] 2025-11-25 23:31:57,138 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-26 00:32:31] 2025-11-25 23:31:57,335 | INFO     | sufficient remaining disk space (494570307584 B)
[2025-11-26 00:32:31] 2025-11-25 23:31:57,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:32:31] 2025-11-25 23:31:57,336 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:32:31] 2025-11-25 23:31:57,336 | INFO     | update_server=False
[2025-11-26 00:32:31] 2025-11-25 23:31:57,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:32:31] 2025-11-25 23:31:57,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:32:31] 2025-11-25 23:31:57,337 | INFO     | aborting loop
[2025-11-26 00:32:31] 2025-11-25 23:31:57,476 | INFO     | all job control threads have been joined
[2025-11-26 00:32:31] 2025-11-25 23:31:57,478 | INFO     | all data control threads have been joined
[2025-11-26 00:32:31] 2025-11-25 23:31:58,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:32:31] 2025-11-25 23:31:58,336 | INFO     | all payload control threads have been joined
[2025-11-26 00:32:31] 2025-11-25 23:31:58,342 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,343 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,482 | INFO     | [job] control thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,484 | INFO     | [data] control thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,533 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,567 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:32:31] 2025-11-25 23:31:58,752 | INFO     | [job] validate thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:58,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:32:31] 2025-11-25 23:31:59,002 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,196 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,213 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,342 | INFO     | [payload] control thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,465 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:31:59,573 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:32:00,656 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:32:02,764 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:32:31] 2025-11-25 23:32:03,223 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:32:31] 2025-11-25 23:32:04,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587853756224)>', '<ExcThread(monitor, started 140587281929984)>']
[2025-11-26 00:32:31] 2025-11-25 23:32:09,191 | INFO     | all workflow threads have been joined
[2025-11-26 00:32:31] 2025-11-25 23:32:09,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:32:31] 2025-11-25 23:32:09,192 | INFO     | traces error code: 0
[2025-11-26 00:32:31] 2025-11-25 23:32:09,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:32:31] 2025-11-25 23:32:25,602 | INFO     | 88233s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 00:32:31] 2025-11-25 23:32:26,789 | INFO     | PID=29020 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:32:31] 2025-11-25 23:32:26,789 | INFO     | .. there are 9 such processes running
[2025-11-26 00:32:31] 2025-11-25 23:32:26,791 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:32:31] 2025-11-25 23:32:26,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:32:31] 2025-11-25 23:32:26,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:32:31] 2025-11-25 23:32:26,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:32:31] 2025-11-25 23:32:26,792 | INFO     | [monitor] control thread has ended
[2025-11-26 00:32:31] 2025-11-25 23:32:27,216 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:32:31] 2025-11-25 23:32:27,228 [wrapper] supervise_pilot (15 min periods counter: 99)
[2025-11-26 00:32:31] 2025-11-25 23:32:27,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:32:31] 2025-11-25 23:32:27,448 [wrapper] pilotpid: 29020
[2025-11-26 00:32:31] 2025-11-25 23:32:27,563 [wrapper] Pilot exit status: 0
[2025-11-26 00:32:31] 2025-11-25 23:32:27,921 [wrapper] pandaids: 6894289669
[2025-11-26 00:32:31] 2025-11-25 23:32:28,553 [wrapper] cleanup supervisor_pilot  2043 29021
[2025-11-26 00:32:31] 2025-11-25 23:32:28,617 [wrapper] Test setup, not cleaning
[2025-11-26 00:32:31] 2025-11-25 23:32:28,692 [wrapper] apfmon messages muted
[2025-11-26 00:32:31] 2025-11-25 23:32:28,743 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:32:31] 2025-11-25 23:32:28,844 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:32:31]  *** Error codes and diagnostics ***
[2025-11-26 00:32:31]     "exeErrorCode": 0,
[2025-11-26 00:32:31]     "exeErrorDiag": "",
[2025-11-26 00:32:31]     "pilotErrorCode": 0,
[2025-11-26 00:32:31]     "pilotErrorDiag": "",
[2025-11-26 00:32:31]  *** Listing of results directory ***
[2025-11-26 00:32:31] total 1329108
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc    576529 Nov 21 12:23 pilot3.tar.gz
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc      5112 Nov 21 12:26 queuedata.json
[2025-11-26 00:32:31] -rwx------. 1 boinc boinc     36292 Nov 21 12:26 runpilot2-wrapper.sh
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc       100 Nov 24 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:32:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 23:56 run_atlas
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc       105 Nov 24 23:56 job.xml
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc      6393 Nov 24 23:56 init_data.xml
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc 409132678 Nov 24 23:56 EVNT.47493127._002409.pool.root.1
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:56 start_atlas.sh
[2025-11-26 00:32:31] drwxrwx--x. 2 boinc boinc        68 Nov 24 23:56 shared
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc    590108 Nov 24 23:56 input.tar.gz
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc         0 Nov 24 23:56 boinc_lockfile
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc      2784 Nov 24 23:56 pandaJob.out
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc    991801 Nov 25 00:01 agis_schedconf.cvmfs.json
[2025-11-26 00:32:31] drwx------. 5 boinc boinc      4096 Nov 25 00:01 pilot3
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc       533 Nov 26 00:00 boinc_task_state.xml
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc 919399148 Nov 26 00:28 HITS.47533967._003806.pool.root.1
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc      1031 Nov 26 00:30 memory_monitor_summary.json
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc   1516240 Nov 26 00:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc   2515543 Nov 26 00:30 log.47533967._003806.job.log.tgz.1
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc      7944 Nov 26 00:31 heartbeat.json
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:32 wrapper_checkpoint.txt
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:32 boinc_mmap_file
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc        95 Nov 26 00:32 pilot_heartbeat.json
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc       936 Nov 26 00:32 pilotlog.txt
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc  11774620 Nov 26 00:32 log.47533967._003806.job.log.1
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc       353 Nov 26 00:32 output.list
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:32 runtime_log
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc  14305280 Nov 26 00:32 result.tar.gz
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc      8817 Nov 26 00:32 runtime_log.err
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc       662 Nov 26 00:32 F51NDmqSeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhLJKDmbchlPo.diag
[2025-11-26 00:32:31] -rw-r--r--. 1 boinc boinc     21413 Nov 26 00:32 stderr.txt
[2025-11-26 00:32:31] HITS file was successfully produced:
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc 919399148 Nov 26 00:28 shared/HITS.pool.root.1
[2025-11-26 00:32:31]  *** Contents of shared directory: ***
[2025-11-26 00:32:31] total 1311964
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc 409132678 Nov 24 23:56 ATLAS.root_0
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:56 start_atlas.sh
[2025-11-26 00:32:31] -rw-r--r--. 2 boinc boinc    590108 Nov 24 23:56 input.tar.gz
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc 919399148 Nov 26 00:28 HITS.pool.root.1
[2025-11-26 00:32:31] -rw-------. 1 boinc boinc  14305280 Nov 26 00:32 result.tar.gz
00:32:32 (25266): run_atlas exited; CPU time 336617.170282
00:32:32 (25266): called boinc_finish(0)

</stderr_txt>
]]>

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