Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:04:06 (1232101): wrapper (7.7.26015): starting
23:04:06 (1232101): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 23:04:06] Arguments: --nthreads 3
[2025-11-24 23:04:06] Threads: 3
[2025-11-24 23:04:06] Checking for CVMFS
[2025-11-24 23:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:04:06] 2.9.2.0 28796 8969 90792 153259 1 81 30348700 36864000 0 130560 0 3347047 99.926 482466 6964 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 23:04:06] CVMFS is ok
[2025-11-24 23:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:04:06] Further information can be found at the LHC@home message board.
[2025-11-24 23:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:04:06] Checking for apptainer binary...
[2025-11-24 23:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:04:06] Running /usr/bin/apptainer --version
[2025-11-24 23:04:06] apptainer version 1.4.1-1.1
[2025-11-24 23:04:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:04:06] thA331b
[2025-11-24 23:04:06] apptainer works
[2025-11-24 23:04:06] Set ATHENA_PROC_NUMBER=3
[2025-11-24 23:04:06] Set ATHENA_CORE_NUMBER=3
[2025-11-24 23:04:06] Starting ATLAS job with PandaID=6894289306
[2025-11-24 23:04:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:56:58]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:56:58] 2025-11-25 05:56:27,657 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 06:56:58] 2025-11-25 05:56:27,670 | INFO     | sufficient remaining disk space (226152677376 B)
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | INFO     | update_server=False
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:56:58] 2025-11-25 05:56:27,671 | INFO     | aborting loop
[2025-11-25 06:56:58] 2025-11-25 05:56:27,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:56:58] 2025-11-25 05:56:28,313 | INFO     | all payload control threads have been joined
[2025-11-25 06:56:58] 2025-11-25 05:56:28,366 | INFO     | all data control threads have been joined
[2025-11-25 06:56:58] 2025-11-25 05:56:28,676 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:28,676 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:28,677 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:28,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:29,114 | INFO     | all job control threads have been joined
[2025-11-25 06:56:58] 2025-11-25 05:56:29,314 | INFO     | [payload] control thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:29,372 | INFO     | [data] control thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:29,383 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:29,550 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:29,677 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,016 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,052 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,095 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,116 | INFO     | [job] validate thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,116 | INFO     | [job] control thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:30,258 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:31,896 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:56:58] 2025-11-25 05:56:45,136 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:56:58] 2025-11-25 05:56:46,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889914754880)>', '<ExcThread(monitor, started 139889299420928)>']
[2025-11-25 06:56:58] 2025-11-25 05:56:51,082 | INFO     | all workflow threads have been joined
[2025-11-25 06:56:58] 2025-11-25 05:56:51,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:56:58] 2025-11-25 05:56:51,083 | INFO     | traces error code: 0
[2025-11-25 06:56:58] 2025-11-25 05:56:51,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:56:58] 2025-11-25 05:56:58,006 | INFO     | PID=1235826 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 06:56:58] 2025-11-25 05:56:58,007 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:56:58] 2025-11-25 05:56:58,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:56:58] 2025-11-25 05:56:58,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:56:58] 2025-11-25 05:56:58,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:56:58] 2025-11-25 05:56:58,007 | INFO     | [monitor] control thread has ended
[2025-11-25 06:56:58] 2025-11-25 05:56:58,054 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:56:58] 2025-11-25 05:56:58,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:56:58] 2025-11-25 05:56:58,059 [wrapper] pilotpid: 1235826
[2025-11-25 06:56:58] 2025-11-25 05:56:58,061 [wrapper] Pilot exit status: 0
[2025-11-25 06:56:58] 2025-11-25 05:56:58,068 [wrapper] pandaids: 6894289306
[2025-11-25 06:56:58] 2025-11-25 05:56:58,084 [wrapper] cleanup supervisor_pilot 1291857 1235827
[2025-11-25 06:56:58] 2025-11-25 05:56:58,086 [wrapper] Test setup, not cleaning
[2025-11-25 06:56:58] 2025-11-25 05:56:58,089 [wrapper] apfmon messages muted
[2025-11-25 06:56:58] 2025-11-25 05:56:58,091 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:56:58] 2025-11-25 05:56:58,093 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:56:58]  *** Error codes and diagnostics ***
[2025-11-25 06:56:58]     "exeErrorCode": 0,
[2025-11-25 06:56:58]     "exeErrorDiag": "",
[2025-11-25 06:56:58]     "pilotErrorCode": 0,
[2025-11-25 06:56:58]     "pilotErrorDiag": "",
[2025-11-25 06:56:58]  *** Listing of results directory ***
[2025-11-25 06:56:58] total 1306636
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc    576529 Nov 21 12:23 pilot3.tar.gz
[2025-11-25 06:56:58] -rwx------ 1 boinc boinc     36292 Nov 21 12:24 runpilot2-wrapper.sh
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      5112 Nov 21 12:24 queuedata.json
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc       100 Nov 24 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:56:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 23:04 run_atlas
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc       105 Nov 24 23:04 job.xml
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc 408738571 Nov 24 23:04 EVNT.47493127._002406.pool.root.1
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc    590104 Nov 24 23:04 input.tar.gz
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:04 start_atlas.sh
[2025-11-25 06:56:58] drwxrwx--x 2 boinc boinc      4096 Nov 24 23:04 shared
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:04 boinc_setup_complete
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      6442 Nov 24 23:04 init_data.xml
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:04 boinc_lockfile
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      2786 Nov 24 23:04 pandaJob.out
[2025-11-25 06:56:58] -rw------- 1 boinc boinc    991801 Nov 24 23:04 agis_schedconf.cvmfs.json
[2025-11-25 06:56:58] drwx------ 5 boinc boinc      4096 Nov 24 23:04 pilot3
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc       531 Nov 25 06:53 boinc_task_state.xml
[2025-11-25 06:56:58] -rw------- 1 boinc boinc 915054366 Nov 25 06:56 HITS.47533967._003773.pool.root.1
[2025-11-25 06:56:58] -rw------- 1 boinc boinc      1025 Nov 25 06:56 memory_monitor_summary.json
[2025-11-25 06:56:58] -rw------- 1 boinc boinc   1516227 Nov 25 06:56 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:56:58] -rw------- 1 boinc boinc   1161914 Nov 25 06:56 log.47533967._003773.job.log.tgz.1
[2025-11-25 06:56:58] -rw------- 1 boinc boinc      8570 Nov 25 06:56 heartbeat.json
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      8192 Nov 25 06:56 boinc_mmap_file
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc        28 Nov 25 06:56 wrapper_checkpoint.txt
[2025-11-25 06:56:58] -rw------- 1 boinc boinc       747 Nov 25 06:56 pilotlog.txt
[2025-11-25 06:56:58] -rw------- 1 boinc boinc        95 Nov 25 06:56 pilot_heartbeat.json
[2025-11-25 06:56:58] -rw------- 1 boinc boinc   3992841 Nov 25 06:56 log.47533967._003773.job.log.1
[2025-11-25 06:56:58] -rw------- 1 boinc boinc       353 Nov 25 06:56 output.list
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc       620 Nov 25 06:56 runtime_log
[2025-11-25 06:56:58] -rw------- 1 boinc boinc   5171200 Nov 25 06:56 result.tar.gz
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      8903 Nov 25 06:56 runtime_log.err
[2025-11-25 06:56:58] -rw------- 1 boinc boinc       666 Nov 25 06:56 6smKDmpQeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLLJKDmc8O2tm.diag
[2025-11-25 06:56:58] -rw-r--r-- 1 boinc boinc      7862 Nov 25 06:56 stderr.txt
[2025-11-25 06:56:58] HITS file was successfully produced:
[2025-11-25 06:56:58] -rw------- 1 boinc boinc 915054366 Nov 25 06:56 shared/HITS.pool.root.1
[2025-11-25 06:56:58]  *** Contents of shared directory: ***
[2025-11-25 06:56:58] total 1298424
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc 408738571 Nov 24 23:04 ATLAS.root_0
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc    590104 Nov 24 23:04 input.tar.gz
[2025-11-25 06:56:58] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:04 start_atlas.sh
[2025-11-25 06:56:58] -rw------- 1 boinc boinc 915054366 Nov 25 06:56 HITS.pool.root.1
[2025-11-25 06:56:58] -rw------- 1 boinc boinc   5171200 Nov 25 06:56 result.tar.gz
06:56:59 (1232101): run_atlas exited; CPU time 83709.626677
06:56:59 (1232101): called boinc_finish(0)

</stderr_txt>
]]>

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