Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:14 (656421): wrapper (7.7.26015): starting
01:37:14 (656421): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 01:37:14] Arguments: --nthreads 3
[2025-11-25 01:37:14] Threads: 3
[2025-11-25 01:37:14] Checking for CVMFS
[2025-11-25 01:37:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:37:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:37:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:37:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:37:14] 2.9.2.0 5164 4888 85540 153264 0 81 19122713 36864000 0 130560 0 1812543 99.980 180495 6321 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 01:37:14] CVMFS is ok
[2025-11-25 01:37:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:37:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:37:14] Further information can be found at the LHC@home message board.
[2025-11-25 01:37:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:37:14] Checking for apptainer binary...
[2025-11-25 01:37:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:37:14] Running /usr/bin/apptainer --version
[2025-11-25 01:37:14] apptainer version 1.4.1-1.1
[2025-11-25 01:37:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:37:14] thA367a
[2025-11-25 01:37:14] apptainer works
[2025-11-25 01:37:14] Set ATHENA_PROC_NUMBER=3
[2025-11-25 01:37:14] Set ATHENA_CORE_NUMBER=3
[2025-11-25 01:37:14] Starting ATLAS job with PandaID=6894289291
[2025-11-25 01:37:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:46:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:46:59] 2025-11-25 08:46:24,128 | INFO     | executing command: lscpu
[2025-11-25 09:46:59] 2025-11-25 08:46:24,142 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 09:46:59] 2025-11-25 08:46:24,364 | INFO     | time since job start (29344s) is within the limit (172800.0s)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,370 | INFO     | time since job start (29346s) is within the limit (172800.0s)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,414 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 09:46:59] 2025-11-25 08:46:26,416 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3759.207083333333
[2025-11-25 09:46:59] 2025-11-25 08:46:26,417 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894289291/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,417 | INFO     | extracted standard info from prmon json
[2025-11-25 09:46:59] 2025-11-25 08:46:26,417 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:46:59] 2025-11-25 08:46:26,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:46:59] 2025-11-25 08:46:26,420 | INFO     | fitting pss+swap vs Time
[2025-11-25 09:46:59] 2025-11-25 08:46:26,420 | INFO     | sum of square deviations: 34507363280.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | sum of deviations: 240383490926.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | mean x: 1764045700.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | mean y: 2202290.126819127
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | intersect: -12286405798.477026
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | chi2: 3.290796507068096
[2025-11-25 09:46:59] 2025-11-25 08:46:26,422 | INFO     | sum of square deviations: 33442394475.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,424 | INFO     | sum of deviations: 284380138371.49994
[2025-11-25 09:46:59] 2025-11-25 08:46:26,424 | INFO     | mean x: 1764045547.5
[2025-11-25 09:46:59] 2025-11-25 08:46:26,424 | INFO     | mean y: 2208553.586134454
[2025-11-25 09:46:59] 2025-11-25 08:46:26,424 | INFO     | intersect: -14998497130.532745
[2025-11-25 09:46:59] 2025-11-25 08:46:26,425 | INFO     | chi2: 2.431750191693995
[2025-11-25 09:46:59] 2025-11-25 08:46:26,425 | INFO     | current chi2=2.431750191693995 (change=26.10451036790057 %)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,425 | INFO     | sum of square deviations: 32399565620.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | sum of deviations: 279978035155.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | mean x: 1764045395.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | mean y: 2207909.7791932058
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | intersect: -15241637313.610126
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | chi2: 2.4302646451679206
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | current chi2=2.4302646451679206 (change=0.061089602507217254 %)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | right removable region: 470
[2025-11-25 09:46:59] 2025-11-25 08:46:26,427 | INFO     | sum of square deviations: 33442394475.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | sum of deviations: 139990293911.00003
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | mean x: 1764045852.5
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | mean y: 2216644.567226891
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | intersect: -7382102009.665607
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | chi2: 1.209324893901735
[2025-11-25 09:46:59] 2025-11-25 08:46:26,429 | INFO     | current chi2=1.209324893901735 (change=63.25130127905807 %)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,430 | INFO     | sum of square deviations: 32399565620.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,431 | INFO     | sum of deviations: 107712516132.99998
[2025-11-25 09:46:59] 2025-11-25 08:46:26,431 | INFO     | mean x: 1764046005.0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,431 | INFO     | mean y: 2221344.0488322717
[2025-11-25 09:46:59] 2025-11-25 08:46:26,431 | INFO     | intersect: -5862358323.513905
[2025-11-25 09:46:59] 2025-11-25 08:46:26,432 | INFO     | chi2: 0.9123918395106607
[2025-11-25 09:46:59] 2025-11-25 08:46:26,432 | INFO     | current chi2=0.9123918395106607 (change=24.553621271539114 %)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,432 | INFO     | left removable region: 20
[2025-11-25 09:46:59] 2025-11-25 08:46:26,432 | INFO     | sum of square deviations: 28256204212.5
[2025-11-25 09:46:59] 2025-11-25 08:46:26,433 | INFO     | sum of deviations: 133061506004.00002
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | mean x: 1764045974.5
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | mean y: 2229875.0355555555
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | intersect: -8304852430.217082
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | chi2: 0.042723413986813466
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | current memory leak: 4.71 B/s (using 450 data points, chi2=0.04)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | could have reported an average CPU frequency of 3904 MHz (20 samples)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | ..............................
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . Timing measurements:
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . get job = 0 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . initial setup = 1 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . payload setup = 2 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . stage-in = 0 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . payload execution = 29320 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . stage-out = 1 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | . log creation = 0 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,434 | INFO     | ..............................
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | 
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | job summary report
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | --------------------------------------------------
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | PanDA job id: 6894289291
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | task id: 47533967
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | errors: (none)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | pilot state: finished 
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | transexitcode: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | exeerrorcode: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | exeerrordiag: 
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | exitcode: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | exitmsg: OK
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | cpuconsumptiontime: 86677 s
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | nevents: 1000
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | neventsw: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | pid: 666581
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | pgrp: 666581
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | corecount: 3
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | event service: False
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | sizes: {0: 2284313, 3: 2284575, 11: 2284603, 29327: 2323704, 29328: 2332709, 29330: 2332765, 29333: 2333139}
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | --------------------------------------------------
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | 
[2025-11-25 09:46:59] 2025-11-25 08:46:26,465 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:46:59] 2025-11-25 08:46:26,477 | INFO     | job 6894289291 has completed (purged errors)
[2025-11-25 09:46:59] 2025-11-25 08:46:26,478 | INFO     | overall cleanup function is called
[2025-11-25 09:46:59] 2025-11-25 08:46:27,486 | INFO     | --- collectZombieJob: --- 10, [666581]
[2025-11-25 09:46:59] 2025-11-25 08:46:27,486 | INFO     | zombie collector waiting for pid 666581
[2025-11-25 09:46:59] 2025-11-25 08:46:27,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:46:59] 2025-11-25 08:46:27,486 | INFO     | collected zombie processes
[2025-11-25 09:46:59] 2025-11-25 08:46:27,486 | INFO     | will attempt to kill all subprocesses of pid=666581
[2025-11-25 09:46:59] 2025-11-25 08:46:27,530 | INFO     | process IDs to be killed: [666581] (in reverse order)
[2025-11-25 09:46:59] 2025-11-25 08:46:27,554 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:46:59] 2025-11-25 08:46:27,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:46:59] 2025-11-25 08:46:27,555 | INFO     | did not find any defunct processes belonging to 666581
[2025-11-25 09:46:59] 2025-11-25 08:46:27,556 | INFO     | did not find any defunct processes belonging to 666581
[2025-11-25 09:46:59] 2025-11-25 08:46:27,557 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:46:59] 2025-11-25 08:46:27,557 | INFO     | ready for new job
[2025-11-25 09:46:59] 2025-11-25 08:46:27,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:46:59] 2025-11-25 08:46:27,558 | INFO     | ***************************************
[2025-11-25 09:46:59] 2025-11-25 08:46:27,558 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:46:59] 2025-11-25 08:46:27,558 | INFO     | ***************************************
[2025-11-25 09:46:59] 2025-11-25 08:46:27,558 | INFO     | 
[2025-11-25 09:46:59] 2025-11-25 08:46:27,559 | INFO     | architecture information:
[2025-11-25 09:46:59] 2025-11-25 08:46:27,559 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:46:59] 2025-11-25 08:46:27,568 | INFO     | cat /etc/os-release:
[2025-11-25 09:46:59] NAME="CentOS Linux"
[2025-11-25 09:46:59] VERSION="7 (Core)"
[2025-11-25 09:46:59] ID="centos"
[2025-11-25 09:46:59] ID_LIKE="rhel fedora"
[2025-11-25 09:46:59] VERSION_ID="7"
[2025-11-25 09:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:46:59] ANSI_COLOR="0;31"
[2025-11-25 09:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:46:59] HOME_URL="https://www.centos.org/"
[2025-11-25 09:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:46:59] 
[2025-11-25 09:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:46:59] 
[2025-11-25 09:46:59] 2025-11-25 08:46:27,568 | INFO     | ***************************************
[2025-11-25 09:46:59] 2025-11-25 08:46:28,070 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 09:46:59] 2025-11-25 08:46:28,082 | INFO     | sufficient remaining disk space (238365442048 B)
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | INFO     | update_server=False
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | INFO     | aborting loop
[2025-11-25 09:46:59] 2025-11-25 08:46:28,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:46:59] 2025-11-25 08:46:28,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:46:59] 2025-11-25 08:46:28,603 | INFO     | all data control threads have been joined
[2025-11-25 09:46:59] 2025-11-25 08:46:28,716 | INFO     | all payload control threads have been joined
[2025-11-25 09:46:59] 2025-11-25 08:46:29,088 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,089 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,089 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,096 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:46:59] 2025-11-25 08:46:29,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:46:59] 2025-11-25 08:46:29,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,530 | INFO     | all job control threads have been joined
[2025-11-25 09:46:59] 2025-11-25 08:46:29,591 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,608 | INFO     | [data] control thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,610 | INFO     | [job] validate thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,670 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,722 | INFO     | [payload] control thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:29,941 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:30,070 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:30,535 | INFO     | [job] control thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:30,587 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:31,240 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:33,269 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:46:59] 2025-11-25 08:46:53,078 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:46:59] 2025-11-25 08:46:54,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851058100032)>', '<ExcThread(monitor, started 139850409817856)>']
[2025-11-25 09:46:59] 2025-11-25 08:46:55,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:46:59] 2025-11-25 08:46:55,223 | INFO     | [monitor] control thread has ended
[2025-11-25 09:46:59] 2025-11-25 08:46:59,713 | INFO     | all workflow threads have been joined
[2025-11-25 09:46:59] 2025-11-25 08:46:59,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:46:59] 2025-11-25 08:46:59,713 | INFO     | traces error code: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:59,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:46:59] 2025-11-25 08:46:59,764 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:46:59] 2025-11-25 08:46:59,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:46:59] 2025-11-25 08:46:59,769 [wrapper] pilotpid: 660138
[2025-11-25 09:46:59] 2025-11-25 08:46:59,771 [wrapper] Pilot exit status: 0
[2025-11-25 09:46:59] 2025-11-25 08:46:59,778 [wrapper] pandaids: 6894289291
[2025-11-25 09:46:59] 2025-11-25 08:46:59,794 [wrapper] cleanup supervisor_pilot  718604 660139
[2025-11-25 09:46:59] 2025-11-25 08:46:59,797 [wrapper] Test setup, not cleaning
[2025-11-25 09:46:59] 2025-11-25 08:46:59,799 [wrapper] apfmon messages muted
[2025-11-25 09:46:59] 2025-11-25 08:46:59,802 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:46:59] 2025-11-25 08:46:59,804 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:46:59]  *** Error codes and diagnostics ***
[2025-11-25 09:46:59]     "exeErrorCode": 0,
[2025-11-25 09:46:59]     "exeErrorDiag": "",
[2025-11-25 09:46:59]     "pilotErrorCode": 0,
[2025-11-25 09:46:59]     "pilotErrorDiag": "",
[2025-11-25 09:46:59]  *** Listing of results directory ***
[2025-11-25 09:46:59] total 1320920
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc    576529 Nov 21 11:50 pilot3.tar.gz
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc      5112 Nov 21 12:21 queuedata.json
[2025-11-25 09:46:59] -rwx------ 1 boinc boinc     36292 Nov 21 12:22 runpilot2-wrapper.sh
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc       100 Nov 25 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:46:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 01:37 run_atlas
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc       105 Nov 25 01:37 job.xml
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc 409416615 Nov 25 01:37 EVNT.47493127._002404.pool.root.1
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc    590107 Nov 25 01:37 input.tar.gz
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:37 start_atlas.sh
[2025-11-25 09:46:59] drwxrwx--x 2 boinc boinc      4096 Nov 25 01:37 shared
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc         0 Nov 25 01:37 boinc_setup_complete
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc      6441 Nov 25 01:37 init_data.xml
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc         0 Nov 25 01:37 boinc_lockfile
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc      2786 Nov 25 01:37 pandaJob.out
[2025-11-25 09:46:59] -rw------- 1 boinc boinc    991801 Nov 25 01:37 agis_schedconf.cvmfs.json
[2025-11-25 09:46:59] drwx------ 5 boinc boinc      4096 Nov 25 01:37 pilot3
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc       532 Nov 25 09:43 boinc_task_state.xml
[2025-11-25 09:46:59] -rw------- 1 boinc boinc        95 Nov 25 09:45 pilot_heartbeat.json
[2025-11-25 09:46:59] -rw------- 1 boinc boinc 928694478 Nov 25 09:46 HITS.47533967._003758.pool.root.1
[2025-11-25 09:46:59] -rw------- 1 boinc boinc      1039 Nov 25 09:46 memory_monitor_summary.json
[2025-11-25 09:46:59] -rw------- 1 boinc boinc   1516240 Nov 25 09:46 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:46:59] -rw------- 1 boinc boinc   1166087 Nov 25 09:46 log.47533967._003758.job.log.tgz.1
[2025-11-25 09:46:59] -rw------- 1 boinc boinc      8568 Nov 25 09:46 heartbeat.json
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc      8192 Nov 25 09:46 boinc_mmap_file
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc        28 Nov 25 09:46 wrapper_checkpoint.txt
[2025-11-25 09:46:59] -rw------- 1 boinc boinc      4556 Nov 25 09:46 pilotlog.txt
[2025-11-25 09:46:59] -rw------- 1 boinc boinc   4124965 Nov 25 09:46 log.47533967._003758.job.log.1
[2025-11-25 09:46:59] -rw------- 1 boinc boinc       353 Nov 25 09:46 output.list
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc       620 Nov 25 09:46 runtime_log
[2025-11-25 09:46:59] -rw------- 1 boinc boinc   5314560 Nov 25 09:46 result.tar.gz
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc      8903 Nov 25 09:46 runtime_log.err
[2025-11-25 09:46:59] -rw------- 1 boinc boinc       666 Nov 25 09:46 kkJLDmrOeg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBZHKDmMNllYn.diag
[2025-11-25 09:46:59] -rw-r--r-- 1 boinc boinc     21222 Nov 25 09:46 stderr.txt
[2025-11-25 09:46:59] HITS file was successfully produced:
[2025-11-25 09:46:59] -rw------- 1 boinc boinc 928694478 Nov 25 09:46 shared/HITS.pool.root.1
[2025-11-25 09:46:59]  *** Contents of shared directory: ***
[2025-11-25 09:46:59] total 1312552
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc 409416615 Nov 25 01:37 ATLAS.root_0
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc    590107 Nov 25 01:37 input.tar.gz
[2025-11-25 09:46:59] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:37 start_atlas.sh
[2025-11-25 09:46:59] -rw------- 1 boinc boinc 928694478 Nov 25 09:46 HITS.pool.root.1
[2025-11-25 09:46:59] -rw------- 1 boinc boinc   5314560 Nov 25 09:46 result.tar.gz
09:47:00 (656421): run_atlas exited; CPU time 86707.266576
09:47:00 (656421): called boinc_finish(0)

</stderr_txt>
]]>

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