Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:47 (4285): wrapper (7.7.26015): starting
00:12:47 (4285): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 00:12:47] Arguments: --nthreads 12
[2025-11-22 00:12:47] Threads: 12
[2025-11-22 00:12:47] Checking for CVMFS
[2025-11-22 00:12:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:12:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:12:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:12:48] 2.11.2.0 2979 281500 94280 153160 0 80 19435609 20275201 1 130560 1 126026487 99.974 15822937 13747 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:12:48] CVMFS is ok
[2025-11-22 00:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:12:48] Further information can be found at the LHC@home message board.
[2025-11-22 00:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:12:48] Checking for apptainer binary...
[2025-11-22 00:12:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:12:48] Running /usr/bin/apptainer --version
[2025-11-22 00:12:48] apptainer version 1.3.2-1.el7
[2025-11-22 00:12:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:12:49] c-205-21.aglt2.org
[2025-11-22 00:12:49] apptainer works
[2025-11-22 00:12:49] Set ATHENA_PROC_NUMBER=12
[2025-11-22 00:12:49] Set ATHENA_CORE_NUMBER=12
[2025-11-22 00:12:49] Starting ATLAS job with PandaID=6893850761
[2025-11-22 00:12:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:34:52]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:34:52] 2025-11-22 12:33:54,818 | INFO     | time since job start (26450s) is within the limit (172800.0s)
[2025-11-22 07:34:52] 2025-11-22 12:33:56,501 | INFO     | monitor loop #1980: job 0:6893850761 is in state 'finished'
[2025-11-22 07:34:52] 2025-11-22 12:33:56,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:34:52] 2025-11-22 12:33:56,824 | INFO     | time since job start (26452s) is within the limit (172800.0s)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,500 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 07:34:52] 2025-11-22 12:33:57,504 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-22 07:34:52] 2025-11-22 12:33:57,507 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893850761/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,507 | INFO     | extracted standard info from prmon json
[2025-11-22 07:34:52] 2025-11-22 12:33:57,508 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:34:52] 2025-11-22 12:33:57,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:34:52] 2025-11-22 12:33:57,515 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:34:52] 2025-11-22 12:33:57,516 | INFO     | sum of square deviations: 25173442484.692856
[2025-11-22 07:34:52] 2025-11-22 12:33:57,520 | INFO     | sum of deviations: 418117953900.3232
[2025-11-22 07:34:52] 2025-11-22 12:33:57,520 | INFO     | mean x: 1763801589.1685913
[2025-11-22 07:34:52] 2025-11-22 12:33:57,520 | INFO     | mean y: 3424707.612009238
[2025-11-22 07:34:52] 2025-11-22 12:33:57,520 | INFO     | intersect: -29292414031.874866
[2025-11-22 07:34:52] 2025-11-22 12:33:57,521 | INFO     | chi2: 5.299416760203946
[2025-11-22 07:34:52] 2025-11-22 12:33:57,521 | INFO     | sum of square deviations: 24311439284.54912
[2025-11-22 07:34:52] 2025-11-22 12:33:57,525 | INFO     | sum of deviations: 562643047045.9701
[2025-11-22 07:34:52] 2025-11-22 12:33:57,525 | INFO     | mean x: 1763801436.6705608
[2025-11-22 07:34:52] 2025-11-22 12:33:57,525 | INFO     | mean y: 3450244.418224299
[2025-11-22 07:34:52] 2025-11-22 12:33:57,526 | INFO     | intersect: -40816453632.810776
[2025-11-22 07:34:52] 2025-11-22 12:33:57,526 | INFO     | chi2: 2.930120384646625
[2025-11-22 07:34:52] 2025-11-22 12:33:57,526 | INFO     | current chi2=2.930120384646625 (change=44.708625170784636 %)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,527 | INFO     | sum of square deviations: 23469343434.40198
[2025-11-22 07:34:52] 2025-11-22 12:33:57,530 | INFO     | sum of deviations: 620729505051.3848
[2025-11-22 07:34:52] 2025-11-22 12:33:57,530 | INFO     | mean x: 1763801284.172577
[2025-11-22 07:34:52] 2025-11-22 12:33:57,531 | INFO     | mean y: 3460728.912529551
[2025-11-22 07:34:52] 2025-11-22 12:33:57,531 | INFO     | intersect: -46646480765.769005
[2025-11-22 07:34:52] 2025-11-22 12:33:57,531 | INFO     | chi2: 2.347471462589945
[2025-11-22 07:34:52] 2025-11-22 12:33:57,531 | INFO     | current chi2=2.347471462589945 (change=19.884811733663554 %)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,531 | INFO     | right removable region: 422
[2025-11-22 07:34:52] 2025-11-22 12:33:57,532 | INFO     | sum of square deviations: 24311421044.887917
[2025-11-22 07:34:52] 2025-11-22 12:33:57,536 | INFO     | sum of deviations: 284239091190.0187
[2025-11-22 07:34:52] 2025-11-22 12:33:57,536 | INFO     | mean x: 1763801741.6682243
[2025-11-22 07:34:52] 2025-11-22 12:33:57,536 | INFO     | mean y: 3448312.971962617
[2025-11-22 07:34:52] 2025-11-22 12:33:57,536 | INFO     | intersect: -20618192979.22094
[2025-11-22 07:34:52] 2025-11-22 12:33:57,537 | INFO     | chi2: 3.1567381299065547
[2025-11-22 07:34:52] 2025-11-22 12:33:57,537 | INFO     | current chi2=3.1567381299065547 (change=40.432348072487336 %)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,537 | INFO     | sum of square deviations: 23469280969.744724
[2025-11-22 07:34:52] 2025-11-22 12:33:57,541 | INFO     | sum of deviations: 243471987607.61697
[2025-11-22 07:34:52] 2025-11-22 12:33:57,541 | INFO     | mean x: 1763801894.1702127
[2025-11-22 07:34:52] 2025-11-22 12:33:57,541 | INFO     | mean y: 3455690.1442080378
[2025-11-22 07:34:52] 2025-11-22 12:33:57,542 | INFO     | intersect: -18294350428.130424
[2025-11-22 07:34:52] 2025-11-22 12:33:57,542 | INFO     | chi2: 3.066025143881295
[2025-11-22 07:34:52] 2025-11-22 12:33:57,542 | INFO     | current chi2=3.066025143881295 (change=2.873630383396574 %)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,542 | INFO     | left removable region: 20
[2025-11-22 07:34:52] 2025-11-22 12:33:57,543 | INFO     | sum of square deviations: 20144553773.960278
[2025-11-22 07:34:52] 2025-11-22 12:33:57,546 | INFO     | sum of deviations: 389837456895.40814
[2025-11-22 07:34:52] 2025-11-22 12:33:57,546 | INFO     | mean x: 1763801863.676617
[2025-11-22 07:34:52] 2025-11-22 12:33:57,546 | INFO     | mean y: 3504228.564676617
[2025-11-22 07:34:52] 2025-11-22 12:33:57,547 | INFO     | intersect: -34129594013.19881
[2025-11-22 07:34:52] 2025-11-22 12:33:57,547 | INFO     | chi2: 0.05464395157648429
[2025-11-22 07:34:52] 2025-11-22 12:33:57,547 | INFO     | current memory leak: 19.35 B/s (using 402 data points, chi2=0.05)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | could have reported an average CPU frequency of 2420 MHz (18 samples)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | ..............................
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . Timing measurements:
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . get job = 0 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . initial setup = 2 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . payload setup = 7 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . stage-in = 0 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . payload execution = 26413 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,548 | INFO     | . stage-out = 3 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,549 | INFO     | . log creation = 0 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,549 | INFO     | ..............................
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | 
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | job summary report
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | --------------------------------------------------
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | PanDA job id: 6893850761
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | task id: 47523449
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | errors: (none)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | pilot state: finished 
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | transexitcode: 0
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | exeerrorcode: 0
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | exeerrordiag: 
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | exitcode: 0
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | exitmsg: OK
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | cpuconsumptiontime: 302954 s
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | nevents: 1000
[2025-11-22 07:34:52] 2025-11-22 12:33:57,629 | INFO     | neventsw: 0
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | pid: 14399
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | pgrp: 14399
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | corecount: 12
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | event service: False
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 26424: 2336587, 26425: 2336586, 26429: 2345636, 26432: 2345820, 26438: 2346066}
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | --------------------------------------------------
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | 
[2025-11-22 07:34:52] 2025-11-22 12:33:57,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 07:34:52] 2025-11-22 12:33:57,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:34:52] 2025-11-22 12:33:57,655 | INFO     | job 6893850761 has completed (purged errors)
[2025-11-22 07:34:52] 2025-11-22 12:33:57,655 | INFO     | overall cleanup function is called
[2025-11-22 07:34:52] 2025-11-22 12:33:58,672 | INFO     | --- collectZombieJob: --- 10, [14399]
[2025-11-22 07:34:52] 2025-11-22 12:33:58,672 | INFO     | zombie collector waiting for pid 14399
[2025-11-22 07:34:52] 2025-11-22 12:33:58,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:34:52] 2025-11-22 12:33:58,672 | INFO     | collected zombie processes
[2025-11-22 07:34:52] 2025-11-22 12:33:58,673 | INFO     | will attempt to kill all subprocesses of pid=14399
[2025-11-22 07:34:52] 2025-11-22 12:33:58,766 | INFO     | process IDs to be killed: [14399] (in reverse order)
[2025-11-22 07:34:52] 2025-11-22 12:33:58,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:34:52] 2025-11-22 12:33:58,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:34:52] 2025-11-22 12:33:58,821 | INFO     | did not find any defunct processes belonging to 14399
[2025-11-22 07:34:52] 2025-11-22 12:33:58,823 | INFO     | did not find any defunct processes belonging to 14399
[2025-11-22 07:34:52] 2025-11-22 12:33:58,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:34:52] 2025-11-22 12:33:58,826 | INFO     | ready for new job
[2025-11-22 07:34:52] 2025-11-22 12:33:58,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:34:52] 2025-11-22 12:33:58,828 | INFO     | ***************************************
[2025-11-22 07:34:52] 2025-11-22 12:33:58,828 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:34:52] 2025-11-22 12:33:58,828 | INFO     | ***************************************
[2025-11-22 07:34:52] 2025-11-22 12:33:58,828 | INFO     | 
[2025-11-22 07:34:52] 2025-11-22 12:33:58,828 | INFO     | architecture information:
[2025-11-22 07:34:52] 2025-11-22 12:33:58,829 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:34:52] 2025-11-22 12:33:58,846 | INFO     | cat /etc/os-release:
[2025-11-22 07:34:52] NAME="CentOS Linux"
[2025-11-22 07:34:52] VERSION="7 (Core)"
[2025-11-22 07:34:52] ID="centos"
[2025-11-22 07:34:52] ID_LIKE="rhel fedora"
[2025-11-22 07:34:52] VERSION_ID="7"
[2025-11-22 07:34:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:34:52] ANSI_COLOR="0;31"
[2025-11-22 07:34:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:34:52] HOME_URL="https://www.centos.org/"
[2025-11-22 07:34:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:34:52] 
[2025-11-22 07:34:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:34:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:34:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:34:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:34:52] 
[2025-11-22 07:34:52] 2025-11-22 12:33:58,846 | INFO     | ***************************************
[2025-11-22 07:34:52] 2025-11-22 12:33:59,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 07:34:52] 2025-11-22 12:33:59,367 | INFO     | sufficient remaining disk space (28215083008 B)
[2025-11-22 07:34:52] 2025-11-22 12:33:59,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:34:52] 2025-11-22 12:33:59,367 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:34:52] 2025-11-22 12:33:59,367 | INFO     | update_server=False
[2025-11-22 07:34:52] 2025-11-22 12:33:59,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:34:52] 2025-11-22 12:33:59,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:34:52] 2025-11-22 12:33:59,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:34:52] 2025-11-22 12:34:00,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:34:52] 2025-11-22 12:34:00,010 | INFO     | aborting loop
[2025-11-22 07:34:52] 2025-11-22 12:34:00,056 | INFO     | all data control threads have been joined
[2025-11-22 07:34:52] 2025-11-22 12:34:00,373 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:00,373 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:00,584 | INFO     | all job control threads have been joined
[2025-11-22 07:34:52] 2025-11-22 12:34:00,772 | INFO     | all payload control threads have been joined
[2025-11-22 07:34:52] 2025-11-22 12:34:00,960 | INFO     | [job] validate thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,012 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,061 | INFO     | [data] control thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,212 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,407 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,482 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,522 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,588 | INFO     | [job] control thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,754 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,776 | INFO     | [payload] control thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,817 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:01,839 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:02,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:34:52] 2025-11-22 12:34:06,051 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:34:52] 2025-11-22 12:34:30,020 | INFO     | PID=7979 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 07:34:52] 2025-11-22 12:34:30,020 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:34:52] 2025-11-22 12:34:30,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:34:52] 2025-11-22 12:34:30,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:34:52] 2025-11-22 12:34:46,880 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:34:52] 2025-11-22 12:34:47,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805944694592)>', '<ExcThread(monitor, started 139805119727360)>']
[2025-11-22 07:34:52] 2025-11-22 12:34:48,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:34:52] 2025-11-22 12:34:48,109 | INFO     | [monitor] control thread has ended
[2025-11-22 07:34:52] 2025-11-22 12:34:52,148 | INFO     | all workflow threads have been joined
[2025-11-22 07:34:52] 2025-11-22 12:34:52,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:34:52] 2025-11-22 12:34:52,149 | INFO     | traces error code: 0
[2025-11-22 07:34:52] 2025-11-22 12:34:52,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:34:52] 2025-11-22 12:34:52,237 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:34:52] 2025-11-22 12:34:52,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:34:52] 2025-11-22 12:34:52,244 [wrapper] pilotpid: 7979
[2025-11-22 07:34:52] 2025-11-22 12:34:52,248 [wrapper] Pilot exit status: 0
[2025-11-22 07:34:52] 2025-11-22 12:34:52,262 [wrapper] pandaids: 6893850761
[2025-11-22 07:34:52] 2025-11-22 12:34:52,312 [wrapper] cleanup supervisor_pilot 32559 7980
[2025-11-22 07:34:52] 2025-11-22 12:34:52,316 [wrapper] Test setup, not cleaning
[2025-11-22 07:34:52] 2025-11-22 12:34:52,320 [wrapper] apfmon messages muted
[2025-11-22 07:34:52] 2025-11-22 12:34:52,324 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:34:52] 2025-11-22 12:34:52,328 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:34:52]  *** Error codes and diagnostics ***
[2025-11-22 07:34:52]     "exeErrorCode": 0,
[2025-11-22 07:34:52]     "exeErrorDiag": "",
[2025-11-22 07:34:52]     "pilotErrorCode": 0,
[2025-11-22 07:34:52]     "pilotErrorDiag": "",
[2025-11-22 07:34:52]  *** Listing of results directory ***
[2025-11-22 07:34:52] total 1336176
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-22 07:34:52] -rwx------ 1 boincer umatlas     36292 Nov 20 06:27 runpilot2-wrapper.sh
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:27 queuedata.json
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas       100 Nov 22 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:34:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 00:12 run_atlas
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas       105 Nov 22 00:12 job.xml
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas 413045147 Nov 22 00:12 EVNT.47493127._000339.pool.root.1
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:12 start_atlas.sh
[2025-11-22 07:34:52] drwxrwx--x 2 boincer umatlas      4096 Nov 22 00:12 shared
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 00:12 input.tar.gz
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas         0 Nov 22 00:12 boinc_lockfile
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 00:12 pandaJob.out
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas        57 Nov 22 00:12 setup.sh.local
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas    989752 Nov 22 00:13 agis_schedconf.cvmfs.json
[2025-11-22 07:34:52] drwx------ 5 boincer umatlas      4096 Nov 22 00:13 pilot3
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas       532 Nov 22 07:22 boinc_task_state.xml
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 07:27 init_data.xml
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas 939452533 Nov 22 07:33 HITS.47523449._003386.pool.root.1
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas      1075 Nov 22 07:33 memory_monitor_summary.json
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas   1526164 Nov 22 07:33 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas   2197136 Nov 22 07:33 log.47523449._003386.job.log.tgz.1
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas      8670 Nov 22 07:33 heartbeat.json
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas        95 Nov 22 07:34 pilot_heartbeat.json
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 07:34 boinc_mmap_file
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas        29 Nov 22 07:34 wrapper_checkpoint.txt
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas      4745 Nov 22 07:34 pilotlog.txt
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas   3710053 Nov 22 07:34 log.47523449._003386.job.log.1
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas       353 Nov 22 07:34 output.list
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas       620 Nov 22 07:34 runtime_log
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas   5928960 Nov 22 07:34 result.tar.gz
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 07:34 runtime_log.err
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas       670 Nov 22 07:34 PKLMDmszHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZXGKDmi7DCJo.diag
[2025-11-22 07:34:52] -rw-r--r-- 1 boincer umatlas     21324 Nov 22 07:34 stderr.txt
[2025-11-22 07:34:52] HITS file was successfully produced:
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas 939452533 Nov 22 07:33 shared/HITS.pool.root.1
[2025-11-22 07:34:52]  *** Contents of shared directory: ***
[2025-11-22 07:34:52] total 1327200
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas 413045147 Nov 22 00:12 ATLAS.root_0
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:12 start_atlas.sh
[2025-11-22 07:34:52] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 00:12 input.tar.gz
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas 939452533 Nov 22 07:33 HITS.pool.root.1
[2025-11-22 07:34:52] -rw------- 1 boincer umatlas   5928960 Nov 22 07:34 result.tar.gz
07:34:53 (4285): run_atlas exited; CPU time 296009.666146
07:34:53 (4285): called boinc_finish(0)

</stderr_txt>
]]>

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