Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:46 (3108486): wrapper (7.7.26015): starting
00:00:46 (3108486): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:00:46] Arguments: --nthreads 8
[2025-11-23 00:00:46] Threads: 8
[2025-11-23 00:00:46] Checking for CVMFS
[2025-11-23 00:00:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:00:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:00:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:00:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:00:52] 2.13.3.0 9230 25148 317324 153197 0 165 32503458 32503809 24566 16776704 0 192672311 99.832 80184817 34344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:00:52] CVMFS is ok
[2025-11-23 00:00:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:00:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:00:52] Further information can be found at the LHC@home message board.
[2025-11-23 00:00:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:00:52] Checking for apptainer binary...
[2025-11-23 00:00:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:00:52] Running /usr/bin/apptainer --version
[2025-11-23 00:00:54] apptainer version 1.4.4-1.el9
[2025-11-23 00:00:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:00:56] c-4-35.aglt2.org
[2025-11-23 00:00:56] apptainer works
[2025-11-23 00:00:56] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:00:56] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:00:56] Starting ATLAS job with PandaID=6894289270
[2025-11-23 00:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:58:51]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:58:51] 2025-11-24 23:58:15,119 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1821499999996
[2025-11-24 18:58:51] 2025-11-24 23:58:15,131 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894289270/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:58:51] 2025-11-24 23:58:15,131 | INFO     | extracted standard info from prmon json
[2025-11-24 18:58:51] 2025-11-24 23:58:15,132 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:58:51] 2025-11-24 23:58:15,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:58:51] 2025-11-24 23:58:15,178 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:58:51] 2025-11-24 23:58:15,181 | INFO     | sum of square deviations: 5021310945235.844
[2025-11-24 18:58:51] 2025-11-24 23:58:15,435 | INFO     | sum of deviations: 15597522334279.004
[2025-11-24 18:58:51] 2025-11-24 23:58:15,437 | INFO     | mean x: 1763951487.558498
[2025-11-24 18:58:51] 2025-11-24 23:58:15,437 | INFO     | mean y: 2959667.057312253
[2025-11-24 18:58:51] 2025-11-24 23:58:15,437 | INFO     | intersect: -5476341062.14421
[2025-11-24 18:58:51] 2025-11-24 23:58:15,442 | INFO     | chi2: 8.984515676028968
[2025-11-24 18:58:51] 2025-11-24 23:58:15,445 | INFO     | sum of square deviations: 4991599148632.1045
[2025-11-24 18:58:51] 2025-11-24 23:58:15,687 | INFO     | sum of deviations: 16424768677880.852
[2025-11-24 18:58:51] 2025-11-24 23:58:15,687 | INFO     | mean x: 1763951335.0625741
[2025-11-24 18:58:51] 2025-11-24 23:58:15,688 | INFO     | mean y: 2963913.076831683
[2025-11-24 18:58:51] 2025-11-24 23:58:15,688 | INFO     | intersect: -5801286743.825673
[2025-11-24 18:58:51] 2025-11-24 23:58:15,691 | INFO     | chi2: 6.17111483880892
[2025-11-24 18:58:51] 2025-11-24 23:58:15,692 | INFO     | current chi2=6.17111483880892 (change=31.313884227797708 %)
[2025-11-24 18:58:51] 2025-11-24 23:58:15,695 | INFO     | sum of square deviations: 4962004796090.8
[2025-11-24 18:58:51] 2025-11-24 23:58:16,103 | INFO     | sum of deviations: 16722891063807.006
[2025-11-24 18:58:51] 2025-11-24 23:58:16,103 | INFO     | mean x: 1763951182.5666666
[2025-11-24 18:58:51] 2025-11-24 23:58:16,103 | INFO     | mean y: 2965448.550396825
[2025-11-24 18:58:51] 2025-11-24 23:58:16,103 | INFO     | intersect: -5941882386.174695
[2025-11-24 18:58:51] 2025-11-24 23:58:16,111 | INFO     | chi2: 5.600944562159192
[2025-11-24 18:58:51] 2025-11-24 23:58:16,111 | INFO     | current chi2=5.600944562159192 (change=9.23933991738478 %)
[2025-11-24 18:58:51] 2025-11-24 23:58:16,111 | INFO     | right removable region: 2519
[2025-11-24 18:58:51] 2025-11-24 23:58:16,118 | INFO     | sum of square deviations: 4991595971752.111
[2025-11-24 18:58:51] 2025-11-24 23:58:16,776 | INFO     | sum of deviations: 14652143233236.76
[2025-11-24 18:58:51] 2025-11-24 23:58:16,777 | INFO     | mean x: 1763951640.0625741
[2025-11-24 18:58:51] 2025-11-24 23:58:16,777 | INFO     | mean y: 2964518.248316832
[2025-11-24 18:58:51] 2025-11-24 23:58:16,777 | INFO     | intersect: -5174872837.37155
[2025-11-24 18:58:51] 2025-11-24 23:58:16,781 | INFO     | chi2: 5.599000613133363
[2025-11-24 18:58:51] 2025-11-24 23:58:16,781 | INFO     | current chi2=5.599000613133363 (change=37.68166459910899 %)
[2025-11-24 18:58:51] 2025-11-24 23:58:16,785 | INFO     | sum of square deviations: 4962001673573.426
[2025-11-24 18:58:51] 2025-11-24 23:58:16,959 | INFO     | sum of deviations: 14247109667025.506
[2025-11-24 18:58:51] 2025-11-24 23:58:16,960 | INFO     | mean x: 1763951792.5583334
[2025-11-24 18:58:51] 2025-11-24 23:58:16,960 | INFO     | mean y: 2966604.323015873
[2025-11-24 18:58:51] 2025-11-24 23:58:16,960 | INFO     | intersect: -5061766599.974022
[2025-11-24 18:58:51] 2025-11-24 23:58:16,963 | INFO     | chi2: 4.992226898156559
[2025-11-24 18:58:51] 2025-11-24 23:58:16,963 | INFO     | current chi2=4.992226898156559 (change=10.837178934281907 %)
[2025-11-24 18:58:51] 2025-11-24 23:58:16,963 | INFO     | left removable region: 20
[2025-11-24 18:58:51] 2025-11-24 23:58:16,967 | INFO     | sum of square deviations: 4838982865267.475
[2025-11-24 18:58:51] 2025-11-24 23:58:17,553 | INFO     | monitor loop #8738: job 0:6894289270 is in state 'finished'
[2025-11-24 18:58:51] 2025-11-24 23:58:17,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:58:51] 2025-11-24 23:58:17,595 | INFO     | sum of deviations: 14872942485318.023
[2025-11-24 18:58:51] 2025-11-24 23:58:17,608 | INFO     | mean x: 1763951762.0584233
[2025-11-24 18:58:51] 2025-11-24 23:58:17,609 | INFO     | mean y: 2975215.3901560623
[2025-11-24 18:58:51] 2025-11-24 23:58:17,609 | INFO     | intersect: -5418650327.505864
[2025-11-24 18:58:51] 2025-11-24 23:58:17,624 | INFO     | chi2: 1.3235726963778114
[2025-11-24 18:58:51] 2025-11-24 23:58:17,625 | INFO     | current memory leak: 3.07 B/s (using 2499 data points, chi2=1.32)
[2025-11-24 18:58:51] 2025-11-24 23:58:17,631 | INFO     | could have reported an average CPU frequency of 2600 MHz (87 samples)
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | ..............................
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . Timing measurements:
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . get job = 1 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . initial setup = 7 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . payload setup = 41 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . stage-in = 0 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . payload execution = 154340 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . stage-out = 5 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,632 | INFO     | . log creation = 1 s
[2025-11-24 18:58:51] 2025-11-24 23:58:17,633 | INFO     | ..............................
[2025-11-24 18:58:51] 2025-11-24 23:58:18,015 | INFO     | 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,015 | INFO     | job summary report
[2025-11-24 18:58:51] 2025-11-24 23:58:18,015 | INFO     | --------------------------------------------------
[2025-11-24 18:58:51] 2025-11-24 23:58:18,015 | INFO     | PanDA job id: 6894289270
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | task id: 47533967
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | errors: (none)
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | pilot state: finished 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | transexitcode: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:18,016 | INFO     | exeerrorcode: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:18,017 | INFO     | exeerrordiag: 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,019 | INFO     | PID=3123788 has CPU usage=20.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,019 | INFO     | exitcode: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:18,019 | INFO     | .. there are 43 such processes running
[2025-11-24 18:58:51] 2025-11-24 23:58:18,019 | INFO     | exitmsg: OK
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | cpuconsumptiontime: 302087 s
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | nevents: 1000
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | neventsw: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | pid: 3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | pgrp: 3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | corecount: 8
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | event service: False
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298641, 3: 2298840, 4: 2298840, 15: 2298868, 28: 2299024, 40: 2299052, 52: 2299080, 62: 2299108, 66: 2299398, 74: 2299706, 1543
[2025-11-24 18:58:51] 2025-11-24 23:58:18,020 | INFO     | --------------------------------------------------
[2025-11-24 18:58:51] 2025-11-24 23:58:18,021 | INFO     | 
[2025-11-24 18:58:51] 2025-11-24 23:58:18,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 18:58:51] 2025-11-24 23:58:18,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:58:51] 2025-11-24 23:58:18,050 | INFO     | job 6894289270 has completed (purged errors)
[2025-11-24 18:58:51] 2025-11-24 23:58:18,051 | INFO     | overall cleanup function is called
[2025-11-24 18:58:51] 2025-11-24 23:58:19,095 | INFO     | --- collectZombieJob: --- 10, [3173568]
[2025-11-24 18:58:51] 2025-11-24 23:58:19,095 | INFO     | zombie collector waiting for pid 3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:19,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:58:51] 2025-11-24 23:58:19,095 | INFO     | collected zombie processes
[2025-11-24 18:58:51] 2025-11-24 23:58:19,096 | INFO     | will attempt to kill all subprocesses of pid=3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:19,596 | INFO     | process IDs to be killed: [3173568] (in reverse order)
[2025-11-24 18:58:51] 2025-11-24 23:58:19,729 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:58:51] 2025-11-24 23:58:19,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:58:51] 2025-11-24 23:58:19,745 | INFO     | did not find any defunct processes belonging to 3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:19,762 | INFO     | did not find any defunct processes belonging to 3173568
[2025-11-24 18:58:51] 2025-11-24 23:58:19,764 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:58:51] 2025-11-24 23:58:19,765 | INFO     | ready for new job
[2025-11-24 18:58:51] 2025-11-24 23:58:19,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:58:51] 2025-11-24 23:58:19,774 | INFO     | ***************************************
[2025-11-24 18:58:51] 2025-11-24 23:58:19,775 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:58:51] 2025-11-24 23:58:19,775 | INFO     | ***************************************
[2025-11-24 18:58:51] 2025-11-24 23:58:19,775 | INFO     | 
[2025-11-24 18:58:51] 2025-11-24 23:58:19,777 | INFO     | architecture information:
[2025-11-24 18:58:51] 2025-11-24 23:58:19,778 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:58:51] 2025-11-24 23:58:19,796 | INFO     | cat /etc/os-release:
[2025-11-24 18:58:51] NAME="CentOS Linux"
[2025-11-24 18:58:51] VERSION="7 (Core)"
[2025-11-24 18:58:51] ID="centos"
[2025-11-24 18:58:51] ID_LIKE="rhel fedora"
[2025-11-24 18:58:51] VERSION_ID="7"
[2025-11-24 18:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:58:51] ANSI_COLOR="0;31"
[2025-11-24 18:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:58:51] HOME_URL="https://www.centos.org/"
[2025-11-24 18:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:58:51] 
[2025-11-24 18:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:58:51] 
[2025-11-24 18:58:51] 2025-11-24 23:58:19,797 | INFO     | ***************************************
[2025-11-24 18:58:51] 2025-11-24 23:58:20,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 18:58:51] 2025-11-24 23:58:20,332 | INFO     | sufficient remaining disk space (90211090432 B)
[2025-11-24 18:58:51] 2025-11-24 23:58:20,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:58:51] 2025-11-24 23:58:20,333 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:58:51] 2025-11-24 23:58:20,333 | INFO     | update_server=False
[2025-11-24 18:58:51] 2025-11-24 23:58:20,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:58:51] 2025-11-24 23:58:21,043 | INFO     | all payload control threads have been joined
[2025-11-24 18:58:51] 2025-11-24 23:58:21,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:58:51] 2025-11-24 23:58:21,063 | INFO     | aborting loop
[2025-11-24 18:58:51] 2025-11-24 23:58:21,144 | INFO     | all job control threads have been joined
[2025-11-24 18:58:51] 2025-11-24 23:58:21,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:58:51] 2025-11-24 23:58:21,338 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:21,405 | INFO     | all data control threads have been joined
[2025-11-24 18:58:51] 2025-11-24 23:58:21,512 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:21,819 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,029 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,048 | INFO     | [payload] control thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,068 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,152 | INFO     | [job] control thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,172 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,244 | INFO     | [job] validate thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,410 | INFO     | [data] control thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,469 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:22,590 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:23,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:58:51] 2025-11-24 23:58:23,305 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:23,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:58:51] 2025-11-24 23:58:24,033 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:27,693 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:58:51] 2025-11-24 23:58:41,067 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:58:51] 2025-11-24 23:58:42,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320144643904)>', '<ExcThread(monitor, started 140319651780352)>']
[2025-11-24 18:58:51] 2025-11-24 23:58:47,283 | INFO     | all workflow threads have been joined
[2025-11-24 18:58:51] 2025-11-24 23:58:47,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:58:51] 2025-11-24 23:58:47,288 | INFO     | traces error code: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:47,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:58:51] 2025-11-24 23:58:50,665 | INFO     | PID=3123788 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:58:51] 2025-11-24 23:58:50,665 | INFO     | .. there are 43 such processes running
[2025-11-24 18:58:51] 2025-11-24 23:58:50,666 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:58:51] 2025-11-24 23:58:50,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:58:51] 2025-11-24 23:58:50,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:58:51] 2025-11-24 23:58:50,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:58:51] 2025-11-24 23:58:50,667 | INFO     | [monitor] control thread has ended
[2025-11-24 18:58:51] 2025-11-24 23:58:50,836 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:58:51] 2025-11-24 23:58:50,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:58:51] 2025-11-24 23:58:50,841 [wrapper] pilotpid: 3123788
[2025-11-24 18:58:51] 2025-11-24 23:58:50,844 [wrapper] Pilot exit status: 0
[2025-11-24 18:58:51] 2025-11-24 23:58:50,855 [wrapper] pandaids: 6894289270
[2025-11-24 18:58:51] 2025-11-24 23:58:50,931 [wrapper] cleanup supervisor_pilot 3474742 3123789
[2025-11-24 18:58:51] 2025-11-24 23:58:50,934 [wrapper] Test setup, not cleaning
[2025-11-24 18:58:51] 2025-11-24 23:58:50,937 [wrapper] apfmon messages muted
[2025-11-24 18:58:51] 2025-11-24 23:58:50,940 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:58:51] 2025-11-24 23:58:50,943 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:58:51]  *** Error codes and diagnostics ***
[2025-11-24 18:58:51]     "exeErrorCode": 0,
[2025-11-24 18:58:51]     "exeErrorDiag": "",
[2025-11-24 18:58:51]     "pilotErrorCode": 0,
[2025-11-24 18:58:51]     "pilotErrorDiag": "",
[2025-11-24 18:58:51]  *** Listing of results directory ***
[2025-11-24 18:58:51] total 1333852
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:17 queuedata.json
[2025-11-24 18:58:51] -rwx------. 1 boincer umatlas     36292 Nov 21 06:18 runpilot2-wrapper.sh
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:58:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:00 run_atlas
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:00 job.xml
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas 410143633 Nov 23 00:00 EVNT.47493127._002402.pool.root.1
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:00 start_atlas.sh
[2025-11-24 18:58:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:00 shared
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:00 input.tar.gz
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:00 boinc_lockfile
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:00 pandaJob.out
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas        57 Nov 23 00:00 setup.sh.local
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas    989784 Nov 23 00:02 agis_schedconf.cvmfs.json
[2025-11-24 18:58:51] drwx------. 5 boincer umatlas      4096 Nov 23 00:02 pilot3
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas       534 Nov 24 18:45 boinc_task_state.xml
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas      6661 Nov 24 18:55 init_data.xml
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas 907997557 Nov 24 18:57 HITS.47533967._003737.pool.root.1
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas      1071 Nov 24 18:57 memory_monitor_summary.json
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:58 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas   3190871 Nov 24 18:58 log.47533967._003737.job.log.tgz.1
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas      8649 Nov 24 18:58 heartbeat.json
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 18:58 boinc_mmap_file
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas        30 Nov 24 18:58 wrapper_checkpoint.txt
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas       823 Nov 24 18:58 pilotlog.txt
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas        95 Nov 24 18:58 pilot_heartbeat.json
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas  18708193 Nov 24 18:58 log.47533967._003737.job.log.1
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas       353 Nov 24 18:58 output.list
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:58 runtime_log
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas  21923840 Nov 24 18:58 result.tar.gz
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas      9334 Nov 24 18:58 runtime_log.err
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas       666 Nov 24 18:58 CNaMDmrKeg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvYHKDmAZ4cQo.diag
[2025-11-24 18:58:51] -rw-r--r--. 1 boincer umatlas     21477 Nov 24 18:58 stderr.txt
[2025-11-24 18:58:51] HITS file was successfully produced:
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas 907997557 Nov 24 18:57 shared/HITS.pool.root.1
[2025-11-24 18:58:51]  *** Contents of shared directory: ***
[2025-11-24 18:58:51] total 1309268
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas 410143633 Nov 23 00:00 ATLAS.root_0
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:00 start_atlas.sh
[2025-11-24 18:58:51] -rw-r--r--. 2 boincer umatlas    590106 Nov 23 00:00 input.tar.gz
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas 907997557 Nov 24 18:57 HITS.pool.root.1
[2025-11-24 18:58:51] -rw-------. 1 boincer umatlas  21923840 Nov 24 18:58 result.tar.gz
18:58:52 (3108486): run_atlas exited; CPU time 307607.045070
18:58:52 (3108486): called boinc_finish(0)

</stderr_txt>
]]>

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