Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:27:27 (1520410): wrapper (7.7.26015): starting
00:27:27 (1520410): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 00:27:27] Arguments: --nthreads 9
[2025-11-22 00:27:27] Threads: 9
[2025-11-22 00:27:27] Checking for CVMFS
[2025-11-22 00:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:27:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:27:30] 2.13.3.0 9158 23824 316308 153161 0 489 22025012 32935936 26466 16776704 0 147262718 99.803 78325919 34159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 00:27:30] CVMFS is ok
[2025-11-22 00:27:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:27:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:27:30] Further information can be found at the LHC@home message board.
[2025-11-22 00:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:27:30] Checking for apptainer binary...
[2025-11-22 00:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:27:30] Running /usr/bin/apptainer --version
[2025-11-22 00:27:30] apptainer version 1.4.4-1.el9
[2025-11-22 00:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:27:30] c-8-16.aglt2.org
[2025-11-22 00:27:30] apptainer works
[2025-11-22 00:27:30] Set ATHENA_PROC_NUMBER=9
[2025-11-22 00:27:30] Set ATHENA_CORE_NUMBER=9
[2025-11-22 00:27:30] Starting ATLAS job with PandaID=6894289152
[2025-11-22 00:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:48:22]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:48:22] 2025-11-24 03:47:20,154 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1402249999996
[2025-11-23 22:48:22] 2025-11-24 03:47:20,160 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894289152/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:48:22] 2025-11-24 03:47:20,161 | INFO     | extracted standard info from prmon json
[2025-11-23 22:48:22] 2025-11-24 03:47:20,161 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:48:22] 2025-11-24 03:47:20,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:48:22] 2025-11-24 03:47:20,208 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:48:22] 2025-11-24 03:47:20,212 | INFO     | sum of square deviations: 6323018429404.7705
[2025-11-23 22:48:22] 2025-11-24 03:47:20,221 | INFO     | time since job start (166752s) is within the limit (172800.0s)
[2025-11-23 22:48:22] 2025-11-24 03:47:20,390 | INFO     | sum of deviations: 17213293023992.068
[2025-11-23 22:48:22] 2025-11-24 03:47:20,391 | INFO     | mean x: 1763872707.9655929
[2025-11-23 22:48:22] 2025-11-24 03:47:20,391 | INFO     | mean y: 3144799.340775988
[2025-11-23 22:48:22] 2025-11-24 03:47:20,391 | INFO     | intersect: -4798684915.093937
[2025-11-23 22:48:22] 2025-11-24 03:47:20,394 | INFO     | chi2: 14.106218014084472
[2025-11-23 22:48:22] 2025-11-24 03:47:20,398 | INFO     | sum of square deviations: 6288367871339.31
[2025-11-23 22:48:22] 2025-11-24 03:47:20,595 | INFO     | sum of deviations: 18183430540983.37
[2025-11-23 22:48:22] 2025-11-24 03:47:20,595 | INFO     | mean x: 1763872555.4701138
[2025-11-23 22:48:22] 2025-11-24 03:47:20,596 | INFO     | mean y: 3149068.1393472683
[2025-11-23 22:48:22] 2025-11-24 03:47:20,596 | INFO     | intersect: -5097260887.473925
[2025-11-23 22:48:22] 2025-11-24 03:47:20,599 | INFO     | chi2: 11.10308149914225
[2025-11-23 22:48:22] 2025-11-24 03:47:20,600 | INFO     | current chi2=11.10308149914225 (change=21.289452012890447 %)
[2025-11-23 22:48:22] 2025-11-24 03:47:20,600 | INFO     | right removable region: 2726
[2025-11-23 22:48:22] 2025-11-24 03:47:20,603 | INFO     | sum of square deviations: 6288364095325.195
[2025-11-23 22:48:22] 2025-11-24 03:47:20,791 | INFO     | sum of deviations: 16003748107939.545
[2025-11-23 22:48:22] 2025-11-24 03:47:20,791 | INFO     | mean x: 1763872860.4693804
[2025-11-23 22:48:22] 2025-11-24 03:47:20,791 | INFO     | mean y: 3150121.8808214157
[2025-11-23 22:48:22] 2025-11-24 03:47:20,792 | INFO     | intersect: -4485867454.943021
[2025-11-23 22:48:22] 2025-11-24 03:47:20,795 | INFO     | chi2: 9.827742698933639
[2025-11-23 22:48:22] 2025-11-24 03:47:20,795 | INFO     | current chi2=9.827742698933639 (change=30.330421030491333 %)
[2025-11-23 22:48:22] 2025-11-24 03:47:20,799 | INFO     | sum of square deviations: 6253836268497.143
[2025-11-23 22:48:22] 2025-11-24 03:47:20,967 | INFO     | sum of deviations: 14897041363168.045
[2025-11-23 22:48:22] 2025-11-24 03:47:20,968 | INFO     | mean x: 1763873012.9739163
[2025-11-23 22:48:22] 2025-11-24 03:47:20,968 | INFO     | mean y: 3155009.9867744306
[2025-11-23 22:48:22] 2025-11-24 03:47:20,968 | INFO     | intersect: -4198504276.491919
[2025-11-23 22:48:22] 2025-11-24 03:47:20,971 | INFO     | chi2: 6.330302564211195
[2025-11-23 22:48:22] 2025-11-24 03:47:20,971 | INFO     | current chi2=6.330302564211195 (change=35.58742065054201 %)
[2025-11-23 22:48:22] 2025-11-24 03:47:20,975 | INFO     | sum of square deviations: 6219435546219.855
[2025-11-23 22:48:22] 2025-11-24 03:47:21,038 | INFO     | monitor loop #9737: job 0:6894289152 is in state 'finished'
[2025-11-23 22:48:22] 2025-11-24 03:47:21,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,148 | INFO     | sum of deviations: 14194008520707.152
[2025-11-23 22:48:22] 2025-11-24 03:47:21,149 | INFO     | mean x: 1763873165.4773648
[2025-11-23 22:48:22] 2025-11-24 03:47:21,149 | INFO     | mean y: 3158125.7177033494
[2025-11-23 22:48:22] 2025-11-24 03:47:21,149 | INFO     | intersect: -4022356819.195495
[2025-11-23 22:48:22] 2025-11-24 03:47:21,152 | INFO     | chi2: 4.89959102043047
[2025-11-23 22:48:22] 2025-11-24 03:47:21,153 | INFO     | current chi2=4.89959102043047 (change=22.600997808056633 %)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,153 | INFO     | left removable region: 30
[2025-11-23 22:48:22] 2025-11-24 03:47:21,156 | INFO     | sum of square deviations: 6076341739136.479
[2025-11-23 22:48:22] 2025-11-24 03:47:21,376 | INFO     | sum of deviations: 14577001917087.27
[2025-11-23 22:48:22] 2025-11-24 03:47:21,376 | INFO     | mean x: 1763873439.9762611
[2025-11-23 22:48:22] 2025-11-24 03:47:21,376 | INFO     | mean y: 3165958.394287834
[2025-11-23 22:48:22] 2025-11-24 03:47:21,376 | INFO     | intersect: -4228325228.223412
[2025-11-23 22:48:22] 2025-11-24 03:47:21,379 | INFO     | chi2: 1.476727519306797
[2025-11-23 22:48:22] 2025-11-24 03:47:21,380 | INFO     | current memory leak: 2.40 B/s (using 2696 data points, chi2=1.48)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | could have reported an average CPU frequency of 2600 MHz (94 samples)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | ..............................
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . Timing measurements:
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . get job = 1 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . initial setup = 5 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . payload setup = 44 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . stage-in = 0 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . payload execution = 166641 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,382 | INFO     | . stage-out = 4 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,383 | INFO     | . log creation = 1 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,383 | INFO     | ..............................
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | 
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | job summary report
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | --------------------------------------------------
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | PanDA job id: 6894289152
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | task id: 47533967
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | errors: (none)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | pilot state: finished 
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | transexitcode: 0
[2025-11-23 22:48:22] 2025-11-24 03:47:21,474 | INFO     | exeerrorcode: 0
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | exeerrordiag: 
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | exitcode: 0
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | exitmsg: OK
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | cpuconsumptiontime: 301916 s
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | nevents: 1000
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | neventsw: 0
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | pid: 1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | pgrp: 1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | corecount: 9
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | event service: False
[2025-11-23 22:48:22] 2025-11-24 03:47:21,475 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298835, 3: 2298891, 14: 2298891, 24: 2299181, 25: 2299337, 166690: 2402437, 166695: 2411487, 166704: 2411677}
[2025-11-23 22:48:22] 2025-11-24 03:47:21,476 | INFO     | --------------------------------------------------
[2025-11-23 22:48:22] 2025-11-24 03:47:21,476 | INFO     | 
[2025-11-23 22:48:22] 2025-11-24 03:47:21,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 22:48:22] 2025-11-24 03:47:21,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:48:22] 2025-11-24 03:47:21,501 | INFO     | job 6894289152 has completed (purged errors)
[2025-11-23 22:48:22] 2025-11-24 03:47:21,502 | INFO     | overall cleanup function is called
[2025-11-23 22:48:22] 2025-11-24 03:47:22,520 | INFO     | --- collectZombieJob: --- 10, [1535202]
[2025-11-23 22:48:22] 2025-11-24 03:47:22,521 | INFO     | zombie collector waiting for pid 1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:22,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:48:22] 2025-11-24 03:47:22,521 | INFO     | collected zombie processes
[2025-11-23 22:48:22] 2025-11-24 03:47:22,521 | INFO     | will attempt to kill all subprocesses of pid=1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:22,954 | INFO     | process IDs to be killed: [1535202] (in reverse order)
[2025-11-23 22:48:22] 2025-11-24 03:47:23,105 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:48:22] 2025-11-24 03:47:23,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:48:22] 2025-11-24 03:47:23,121 | INFO     | did not find any defunct processes belonging to 1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:23,135 | INFO     | did not find any defunct processes belonging to 1535202
[2025-11-23 22:48:22] 2025-11-24 03:47:23,136 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:48:22] 2025-11-24 03:47:23,137 | INFO     | ready for new job
[2025-11-23 22:48:22] 2025-11-24 03:47:23,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:48:22] 2025-11-24 03:47:23,146 | INFO     | ***************************************
[2025-11-23 22:48:22] 2025-11-24 03:47:23,147 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:48:22] 2025-11-24 03:47:23,147 | INFO     | ***************************************
[2025-11-23 22:48:22] 2025-11-24 03:47:23,147 | INFO     | 
[2025-11-23 22:48:22] 2025-11-24 03:47:23,149 | INFO     | architecture information:
[2025-11-23 22:48:22] 2025-11-24 03:47:23,149 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:48:22] 2025-11-24 03:47:23,166 | INFO     | cat /etc/os-release:
[2025-11-23 22:48:22] NAME="CentOS Linux"
[2025-11-23 22:48:22] VERSION="7 (Core)"
[2025-11-23 22:48:22] ID="centos"
[2025-11-23 22:48:22] ID_LIKE="rhel fedora"
[2025-11-23 22:48:22] VERSION_ID="7"
[2025-11-23 22:48:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:48:22] ANSI_COLOR="0;31"
[2025-11-23 22:48:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:48:22] HOME_URL="https://www.centos.org/"
[2025-11-23 22:48:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:48:22] 
[2025-11-23 22:48:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:48:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:48:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:48:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:48:22] 
[2025-11-23 22:48:22] 2025-11-24 03:47:23,167 | INFO     | ***************************************
[2025-11-23 22:48:22] 2025-11-24 03:47:23,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 22:48:22] 2025-11-24 03:47:23,720 | INFO     | sufficient remaining disk space (72186068992 B)
[2025-11-23 22:48:22] 2025-11-24 03:47:23,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:48:22] 2025-11-24 03:47:23,721 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:48:22] 2025-11-24 03:47:23,721 | INFO     | update_server=False
[2025-11-23 22:48:22] 2025-11-24 03:47:23,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:48:22] 2025-11-24 03:47:23,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:48:22] 2025-11-24 03:47:23,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:48:22] 2025-11-24 03:47:23,758 | INFO     | all payload control threads have been joined
[2025-11-23 22:48:22] 2025-11-24 03:47:24,108 | INFO     | all job control threads have been joined
[2025-11-23 22:48:22] 2025-11-24 03:47:24,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:48:22] 2025-11-24 03:47:24,549 | INFO     | aborting loop
[2025-11-23 22:48:22] 2025-11-24 03:47:24,699 | INFO     | all data control threads have been joined
[2025-11-23 22:48:22] 2025-11-24 03:47:24,726 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:24,748 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:24,763 | INFO     | [payload] control thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:24,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:24,859 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,114 | INFO     | [job] control thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,287 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,555 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,640 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,658 | INFO     | [job] validate thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,704 | INFO     | [data] control thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,737 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:25,879 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:26,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:48:22] 2025-11-24 03:47:27,492 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:27,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:34,415 | INFO     | job.realtimelogging is not enabled
[2025-11-23 22:48:22] 2025-11-24 03:47:35,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:48:22] 2025-11-24 03:47:53,893 | INFO     | PID=1526198 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:48:22] 2025-11-24 03:47:53,893 | INFO     | .. there are 42 such processes running
[2025-11-23 22:48:22] 2025-11-24 03:47:53,894 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:48:22] 2025-11-24 03:47:53,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:48:22] 2025-11-24 03:47:53,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:48:22] 2025-11-24 03:48:13,649 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:48:22] 2025-11-24 03:48:15,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362679527232)>', '<ExcThread(monitor, started 140361745823488)>']
[2025-11-23 22:48:22] 2025-11-24 03:48:16,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:48:22] 2025-11-24 03:48:16,023 | INFO     | [monitor] control thread has ended
[2025-11-23 22:48:22] 2025-11-24 03:48:20,539 | INFO     | all workflow threads have been joined
[2025-11-23 22:48:22] 2025-11-24 03:48:20,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:48:22] 2025-11-24 03:48:20,539 | INFO     | traces error code: 0
[2025-11-23 22:48:22] 2025-11-24 03:48:20,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:48:22] 2025-11-24 03:48:20,926 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:48:22] 2025-11-24 03:48:20,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:48:22] 2025-11-24 03:48:20,962 [wrapper] pilotpid: 1526198
[2025-11-23 22:48:22] 2025-11-24 03:48:20,981 [wrapper] Pilot exit status: 0
[2025-11-23 22:48:22] 2025-11-24 03:48:21,112 [wrapper] pandaids: 6894289152
[2025-11-23 22:48:22] 2025-11-24 03:48:21,379 [wrapper] cleanup supervisor_pilot 2667845 1526199
[2025-11-23 22:48:22] 2025-11-24 03:48:21,395 [wrapper] Test setup, not cleaning
[2025-11-23 22:48:22] 2025-11-24 03:48:21,415 [wrapper] apfmon messages muted
[2025-11-23 22:48:22] 2025-11-24 03:48:21,457 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:48:22] 2025-11-24 03:48:21,489 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:48:22]  *** Error codes and diagnostics ***
[2025-11-23 22:48:22]     "exeErrorCode": 0,
[2025-11-23 22:48:22]     "exeErrorDiag": "",
[2025-11-23 22:48:22]     "pilotErrorCode": 0,
[2025-11-23 22:48:22]     "pilotErrorDiag": "",
[2025-11-23 22:48:22]  *** Listing of results directory ***
[2025-11-23 22:48:22] total 1351568
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:19 queuedata.json
[2025-11-23 22:48:22] -rwx------. 1 boincer umatlas     36292 Nov 21 06:20 runpilot2-wrapper.sh
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas       100 Nov 22 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:48:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 00:27 run_atlas
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas       105 Nov 22 00:27 job.xml
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas 409895025 Nov 22 00:27 EVNT.47493127._002401.pool.root.1
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:27 start_atlas.sh
[2025-11-23 22:48:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 00:27 shared
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas    590107 Nov 22 00:27 input.tar.gz
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas         0 Nov 22 00:27 boinc_lockfile
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 00:27 pandaJob.out
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas        57 Nov 22 00:27 setup.sh.local
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas    989752 Nov 22 00:28 agis_schedconf.cvmfs.json
[2025-11-23 22:48:22] drwx------. 5 boincer umatlas      4096 Nov 22 00:28 pilot3
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas       533 Nov 23 22:38 boinc_task_state.xml
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas      6658 Nov 23 22:46 init_data.xml
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas 921801779 Nov 23 22:46 HITS.47533967._003724.pool.root.1
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas      1064 Nov 23 22:47 memory_monitor_summary.json
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas   3483434 Nov 23 22:47 log.47533967._003724.job.log.tgz.1
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas      8641 Nov 23 22:47 heartbeat.json
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas        95 Nov 23 22:47 pilot_heartbeat.json
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas      4896 Nov 23 22:48 pilotlog.txt
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas  20705625 Nov 23 22:48 log.47533967._003724.job.log.1
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas        29 Nov 23 22:48 wrapper_checkpoint.txt
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 22:48 boinc_mmap_file
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas       353 Nov 23 22:48 output.list
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:48 runtime_log
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas  24207360 Nov 23 22:48 result.tar.gz
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas       663 Nov 23 22:48 BOPODmpMeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyKJKDmBsGLRo.diag
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas      9334 Nov 23 22:48 runtime_log.err
[2025-11-23 22:48:22] -rw-r--r--. 1 boincer umatlas     21362 Nov 23 22:48 stderr.txt
[2025-11-23 22:48:22] HITS file was successfully produced:
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas 921801779 Nov 23 22:46 shared/HITS.pool.root.1
[2025-11-23 22:48:22]  *** Contents of shared directory: ***
[2025-11-23 22:48:22] total 1324736
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas 409895025 Nov 22 00:27 ATLAS.root_0
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:27 start_atlas.sh
[2025-11-23 22:48:22] -rw-r--r--. 2 boincer umatlas    590107 Nov 22 00:27 input.tar.gz
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas 921801779 Nov 23 22:46 HITS.pool.root.1
[2025-11-23 22:48:22] -rw-------. 1 boincer umatlas  24207360 Nov 23 22:48 result.tar.gz
22:48:23 (1520410): run_atlas exited; CPU time 306594.020183
22:48:23 (1520410): called boinc_finish(0)

</stderr_txt>
]]>

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