Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:46 (14776): wrapper (7.7.26015): starting
00:31:46 (14776): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:31:46] Arguments: --nthreads 8
[2025-11-25 00:31:46] Threads: 8
[2025-11-25 00:31:46] Checking for CVMFS
[2025-11-25 00:31:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:31:48] 2.11.2.0 31978 283104 140284 153263 2 84 22788961 25165824 1060 130560 12 130453277 99.873 76967933 2708 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 00:31:48] CVMFS is ok
[2025-11-25 00:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:31:48] Checking for apptainer binary...
[2025-11-25 00:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:31:48] Running /usr/bin/apptainer --version
[2025-11-25 00:31:48] apptainer version 1.3.2-1.el7
[2025-11-25 00:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:31:54] cg-vwn266.simple-grid.lan
[2025-11-25 00:31:54] apptainer works
[2025-11-25 00:31:54] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:31:54] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:31:54] Starting ATLAS job with PandaID=6894289106
[2025-11-25 00:31:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:55:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:55:25] 2025-11-25 22:54:39,131 | INFO     | time since job start (83874s) is within the limit (172800.0s)
[2025-11-25 23:55:25] 2025-11-25 22:54:39,131 | INFO     | 83882s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 23:55:25] 2025-11-25 22:54:39,206 | INFO     | monitor loop #5661: job 0:6894289106 is in state 'finished'
[2025-11-25 23:55:25] 2025-11-25 22:54:39,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:55:25] 2025-11-25 22:54:41,138 | INFO     | time since job start (83876s) is within the limit (172800.0s)
[2025-11-25 23:55:25] 2025-11-25 22:54:41,710 | INFO     | monitor loop #5662: job 0:6894289106 is in state 'finished'
[2025-11-25 23:55:25] 2025-11-25 22:54:41,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:55:25] 2025-11-25 22:54:43,158 | INFO     | time since job start (83878s) is within the limit (172800.0s)
[2025-11-25 23:55:25] 2025-11-25 22:54:44,222 | INFO     | monitor loop #5663: job 0:6894289106 is in state 'finished'
[2025-11-25 23:55:25] 2025-11-25 22:54:44,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:55:25] 2025-11-25 22:54:45,164 | INFO     | time since job start (83880s) is within the limit (172800.0s)
[2025-11-25 23:55:25] 2025-11-25 22:54:46,731 | INFO     | monitor loop #5664: job 0:6894289106 is in state 'finished'
[2025-11-25 23:55:25] 2025-11-25 22:54:46,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,172 | INFO     | time since job start (83882s) is within the limit (172800.0s)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,278 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:55:25] 2025-11-25 22:54:47,279 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 23:55:25] 2025-11-25 22:54:47,281 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6894289106/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,282 | INFO     | extracted standard info from prmon json
[2025-11-25 23:55:25] 2025-11-25 22:54:47,282 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:55:25] 2025-11-25 22:54:47,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:55:25] 2025-11-25 22:54:47,317 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:55:25] 2025-11-25 22:54:47,319 | INFO     | sum of square deviations: 788641243179.5038
[2025-11-25 23:55:25] 2025-11-25 22:54:47,419 | INFO     | sum of deviations: 3036084085879.9624
[2025-11-25 23:55:25] 2025-11-25 22:54:47,420 | INFO     | mean x: 1764069574.2190475
[2025-11-25 23:55:25] 2025-11-25 22:54:47,420 | INFO     | mean y: 2816438.93992674
[2025-11-25 23:55:25] 2025-11-25 22:54:47,420 | INFO     | intersect: -6788438275.407335
[2025-11-25 23:55:25] 2025-11-25 22:54:47,422 | INFO     | chi2: 32.05829665170331
[2025-11-25 23:55:25] 2025-11-25 22:54:47,424 | INFO     | sum of square deviations: 780007132982.046
[2025-11-25 23:55:25] 2025-11-25 22:54:47,487 | INFO     | sum of deviations: 3500359465856.297
[2025-11-25 23:55:25] 2025-11-25 22:54:47,488 | INFO     | mean x: 1764069421.7235293
[2025-11-25 23:55:25] 2025-11-25 22:54:47,488 | INFO     | mean y: 2824636.7720588236
[2025-11-25 23:55:25] 2025-11-25 22:54:47,488 | INFO     | intersect: -7913612069.582691
[2025-11-25 23:55:25] 2025-11-25 22:54:47,490 | INFO     | chi2: 28.561337671729174
[2025-11-25 23:55:25] 2025-11-25 22:54:47,490 | INFO     | current chi2=28.561337671729174 (change=10.90812471406941 %)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,490 | INFO     | right removable region: 1359
[2025-11-25 23:55:25] 2025-11-25 22:54:47,492 | INFO     | sum of square deviations: 780006117942.0469
[2025-11-25 23:55:25] 2025-11-25 22:54:47,558 | INFO     | sum of deviations: 2463956101426.169
[2025-11-25 23:55:25] 2025-11-25 22:54:47,558 | INFO     | mean x: 1764069726.7235293
[2025-11-25 23:55:25] 2025-11-25 22:54:47,558 | INFO     | mean y: 2826542.747794118
[2025-11-25 23:55:25] 2025-11-25 22:54:47,559 | INFO     | intersect: -5569681501.124471
[2025-11-25 23:55:25] 2025-11-25 22:54:47,560 | INFO     | chi2: 27.192854213377018
[2025-11-25 23:55:25] 2025-11-25 22:54:47,560 | INFO     | current chi2=27.192854213377018 (change=15.176858868039023 %)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,560 | INFO     | left removable region: 10
[2025-11-25 23:55:25] 2025-11-25 22:54:47,562 | INFO     | sum of square deviations: 761232397659.4443
[2025-11-25 23:55:25] 2025-11-25 22:54:47,642 | INFO     | sum of deviations: 2507390315962.753
[2025-11-25 23:55:25] 2025-11-25 22:54:47,643 | INFO     | mean x: 1764069696.2335062
[2025-11-25 23:55:25] 2025-11-25 22:54:47,643 | INFO     | mean y: 2845602.1912527797
[2025-11-25 23:55:25] 2025-11-25 22:54:47,643 | INFO     | intersect: -5807746914.12737
[2025-11-25 23:55:25] 2025-11-25 22:54:47,645 | INFO     | chi2: 19.199470818862096
[2025-11-25 23:55:25] 2025-11-25 22:54:47,645 | INFO     | current memory leak: 3.29 B/s (using 1349 data points, chi2=19.20)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,647 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | ..............................
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . Timing measurements:
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . get job = 0 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . initial setup = 8 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . payload setup = 191 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . stage-in = 0 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . payload execution = 83371 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,648 | INFO     | . stage-out = 6 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,649 | INFO     | . log creation = 2 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,649 | INFO     | ..............................
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | 
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | job summary report
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | --------------------------------------------------
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | PanDA job id: 6894289106
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | task id: 47533967
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | errors: (none)
[2025-11-25 23:55:25] 2025-11-25 22:54:47,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | pilot state: finished 
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | transexitcode: 0
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | exeerrorcode: 0
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | exeerrordiag: 
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | exitcode: 0
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | exitmsg: OK
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | cpuconsumptiontime: 334110 s
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | nevents: 1000
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | neventsw: 0
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | pid: 24955
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | pgrp: 24955
[2025-11-25 23:55:25] 2025-11-25 22:54:47,796 | INFO     | corecount: 8
[2025-11-25 23:55:25] 2025-11-25 22:54:47,797 | INFO     | event service: False
[2025-11-25 23:55:25] 2025-11-25 22:54:47,797 | INFO     | sizes: {0: 2284083, 1: 2284167, 2: 2284366, 12: 2284366, 23: 2284394, 34: 2284422, 45: 2284578, 55: 2284606, 66: 2284634, 77: 2284662, 88: 2284718, 98: 2285026, 10
[2025-11-25 23:55:25] 2025-11-25 22:54:47,797 | INFO     | --------------------------------------------------
[2025-11-25 23:55:25] 2025-11-25 22:54:47,797 | INFO     | 
[2025-11-25 23:55:25] 2025-11-25 22:54:47,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-25 23:55:25] 2025-11-25 22:54:48,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | job 6894289106 has completed (purged errors)
[2025-11-25 23:55:25] 2025-11-25 22:54:48,282 | INFO     | overall cleanup function is called
[2025-11-25 23:55:25] 2025-11-25 22:54:49,301 | INFO     | --- collectZombieJob: --- 10, [24955]
[2025-11-25 23:55:25] 2025-11-25 22:54:49,301 | INFO     | zombie collector waiting for pid 24955
[2025-11-25 23:55:25] 2025-11-25 22:54:49,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:55:25] 2025-11-25 22:54:49,302 | INFO     | collected zombie processes
[2025-11-25 23:55:25] 2025-11-25 22:54:49,302 | INFO     | will attempt to kill all subprocesses of pid=24955
[2025-11-25 23:55:25] 2025-11-25 22:54:49,438 | INFO     | process IDs to be killed: [24955] (in reverse order)
[2025-11-25 23:55:25] 2025-11-25 22:54:50,416 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:55:25] 2025-11-25 22:54:50,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:55:25] 2025-11-25 22:54:50,419 | INFO     | did not find any defunct processes belonging to 24955
[2025-11-25 23:55:25] 2025-11-25 22:54:50,422 | INFO     | did not find any defunct processes belonging to 24955
[2025-11-25 23:55:25] 2025-11-25 22:54:50,438 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:55:25] 2025-11-25 22:54:50,439 | INFO     | ready for new job
[2025-11-25 23:55:25] 2025-11-25 22:54:50,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:55:25] 2025-11-25 22:54:50,445 | INFO     | ***************************************
[2025-11-25 23:55:25] 2025-11-25 22:54:50,445 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:55:25] 2025-11-25 22:54:50,445 | INFO     | ***************************************
[2025-11-25 23:55:25] 2025-11-25 22:54:50,445 | INFO     | 
[2025-11-25 23:55:25] 2025-11-25 22:54:50,446 | INFO     | pilot is running in a VM
[2025-11-25 23:55:25] 2025-11-25 22:54:50,446 | INFO     | architecture information:
[2025-11-25 23:55:25] 2025-11-25 22:54:50,454 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:55:25] 2025-11-25 22:54:50,658 | INFO     | cat /etc/os-release:
[2025-11-25 23:55:25] NAME="CentOS Linux"
[2025-11-25 23:55:25] VERSION="7 (Core)"
[2025-11-25 23:55:25] ID="centos"
[2025-11-25 23:55:25] ID_LIKE="rhel fedora"
[2025-11-25 23:55:25] VERSION_ID="7"
[2025-11-25 23:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:55:25] ANSI_COLOR="0;31"
[2025-11-25 23:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:55:25] HOME_URL="https://www.centos.org/"
[2025-11-25 23:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:55:25] 
[2025-11-25 23:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:55:25] 
[2025-11-25 23:55:25] 2025-11-25 22:54:50,658 | INFO     | ***************************************
[2025-11-25 23:55:25] 2025-11-25 22:54:51,162 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-25 23:55:25] 2025-11-25 22:54:51,394 | INFO     | sufficient remaining disk space (494994980864 B)
[2025-11-25 23:55:25] 2025-11-25 22:54:51,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:55:25] 2025-11-25 22:54:51,394 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:55:25] 2025-11-25 22:54:51,394 | INFO     | update_server=False
[2025-11-25 23:55:25] 2025-11-25 22:54:51,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:55:25] 2025-11-25 22:54:51,744 | INFO     | all data control threads have been joined
[2025-11-25 23:55:25] 2025-11-25 22:54:51,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 23:55:25] 2025-11-25 22:54:51,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 23:55:25] 2025-11-25 22:54:51,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:55:25] 2025-11-25 22:54:51,774 | INFO     | will abort loop
[2025-11-25 23:55:25] 2025-11-25 22:54:51,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:55:25] 2025-11-25 22:54:52,310 | INFO     | all payload control threads have been joined
[2025-11-25 23:55:25] 2025-11-25 22:54:52,400 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,653 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,654 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,705 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,750 | INFO     | [data] control thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,756 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,779 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,806 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:52,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:55:25] 2025-11-25 22:54:53,066 | INFO     | all job control threads have been joined
[2025-11-25 23:55:25] 2025-11-25 22:54:53,316 | INFO     | [payload] control thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:53,645 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:53,709 | INFO     | [job] validate thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:53,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:53,817 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:53,975 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:54,072 | INFO     | [job] control thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:54:54,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:55:25] 2025-11-25 22:54:58,097 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:55:25] 2025-11-25 22:55:10,679 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:55:25] 2025-11-25 22:55:10,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815234733888)>', '<ExcThread(monitor, started 139814649186048)>']
[2025-11-25 23:55:25] 2025-11-25 22:55:15,810 | INFO     | all workflow threads have been joined
[2025-11-25 23:55:25] 2025-11-25 22:55:15,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:55:25] 2025-11-25 22:55:15,811 | INFO     | traces error code: 0
[2025-11-25 23:55:25] 2025-11-25 22:55:15,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:55:25] 2025-11-25 22:55:20,354 | INFO     | PID=18499 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | INFO     | .. there are 9 such processes running
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:55:25] 2025-11-25 22:55:20,355 | INFO     | [monitor] control thread has ended
[2025-11-25 23:55:25] 2025-11-25 22:55:20,787 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:55:25] 2025-11-25 22:55:20,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:55:25] 2025-11-25 22:55:20,997 [wrapper] pilotpid: 18499
[2025-11-25 23:55:25] 2025-11-25 22:55:21,116 [wrapper] Pilot exit status: 0
[2025-11-25 23:55:25] 2025-11-25 22:55:21,496 [wrapper] pandaids: 6894289106
[2025-11-25 23:55:25] 2025-11-25 22:55:22,274 [wrapper] cleanup supervisor_pilot 29110 18500
[2025-11-25 23:55:25] 2025-11-25 22:55:22,376 [wrapper] Test setup, not cleaning
[2025-11-25 23:55:25] 2025-11-25 22:55:22,461 [wrapper] apfmon messages muted
[2025-11-25 23:55:25] 2025-11-25 22:55:22,579 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:55:25] 2025-11-25 22:55:22,692 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:55:25]  *** Error codes and diagnostics ***
[2025-11-25 23:55:25]     "exeErrorCode": 0,
[2025-11-25 23:55:25]     "exeErrorDiag": "",
[2025-11-25 23:55:25]     "pilotErrorCode": 0,
[2025-11-25 23:55:25]     "pilotErrorDiag": "",
[2025-11-25 23:55:25]  *** Listing of results directory ***
[2025-11-25 23:55:25] total 1327320
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc    576529 Nov 21 11:50 pilot3.tar.gz
[2025-11-25 23:55:25] -rwx------. 1 boinc boinc     36292 Nov 21 12:15 runpilot2-wrapper.sh
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc      5112 Nov 21 12:15 queuedata.json
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:55:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:31 run_atlas
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:31 job.xml
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc      6392 Nov 25 00:31 init_data.xml
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc 409818461 Nov 25 00:31 EVNT.47493127._002396.pool.root.1
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:31 start_atlas.sh
[2025-11-25 23:55:25] drwxrwx--x. 2 boinc boinc        68 Nov 25 00:31 shared
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc    590103 Nov 25 00:31 input.tar.gz
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:31 boinc_lockfile
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc      2786 Nov 25 00:31 pandaJob.out
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc    991801 Nov 25 00:36 agis_schedconf.cvmfs.json
[2025-11-25 23:55:25] drwx------. 5 boinc boinc      4096 Nov 25 00:36 pilot3
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc       533 Nov 25 23:22 boinc_task_state.xml
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc 918074840 Nov 25 23:51 HITS.47533967._003678.pool.root.1
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc      1034 Nov 25 23:52 memory_monitor_summary.json
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc   1516240 Nov 25 23:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc   2468301 Nov 25 23:53 log.47533967._003678.job.log.tgz.1
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc        95 Nov 25 23:54 pilot_heartbeat.json
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc      7945 Nov 25 23:54 heartbeat.json
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc      8192 Nov 25 23:54 boinc_mmap_file
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc        29 Nov 25 23:54 wrapper_checkpoint.txt
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc       820 Nov 25 23:55 pilotlog.txt
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc  11220778 Nov 25 23:55 log.47533967._003678.job.log.1
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc       353 Nov 25 23:55 output.list
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc       620 Nov 25 23:55 runtime_log
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc  13711360 Nov 25 23:55 result.tar.gz
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc      8817 Nov 25 23:55 runtime_log.err
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc       662 Nov 25 23:55 gSyKDmtHeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmKJKDm6sDISo.diag
[2025-11-25 23:55:25] -rw-r--r--. 1 boinc boinc     21429 Nov 25 23:55 stderr.txt
[2025-11-25 23:55:25] HITS file was successfully produced:
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc 918074840 Nov 25 23:51 shared/HITS.pool.root.1
[2025-11-25 23:55:25]  *** Contents of shared directory: ***
[2025-11-25 23:55:25] total 1310764
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc 409818461 Nov 25 00:31 ATLAS.root_0
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:31 start_atlas.sh
[2025-11-25 23:55:25] -rw-r--r--. 2 boinc boinc    590103 Nov 25 00:31 input.tar.gz
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc 918074840 Nov 25 23:51 HITS.pool.root.1
[2025-11-25 23:55:25] -rw-------. 1 boinc boinc  13711360 Nov 25 23:55 result.tar.gz
23:55:27 (14776): run_atlas exited; CPU time 334414.979274
23:55:27 (14776): called boinc_finish(0)

</stderr_txt>
]]>

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