Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:33 (3829262): wrapper (7.7.26015): starting
09:48:33 (3829262): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 09:48:33] Arguments: --nthreads 8
[2025-11-22 09:48:33] Threads: 8
[2025-11-22 09:48:33] Checking for CVMFS
[2025-11-22 09:48:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 09:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 09:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 09:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 09:48:33] 2.13.3.0 11338 24296 242264 153174 2 479 25638388 32935937 32180 16776704 0 108681877 99.525 123727259 38526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 09:48:33] CVMFS is ok
[2025-11-22 09:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 09:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 09:48:33] Further information can be found at the LHC@home message board.
[2025-11-22 09:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 09:48:33] Checking for apptainer binary...
[2025-11-22 09:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 09:48:33] Running /usr/bin/apptainer --version
[2025-11-22 09:48:33] apptainer version 1.4.4-1.el9
[2025-11-22 09:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 09:48:34] c7-3-17.aglt2.org
[2025-11-22 09:48:34] apptainer works
[2025-11-22 09:48:34] Set ATHENA_PROC_NUMBER=8
[2025-11-22 09:48:34] Set ATHENA_CORE_NUMBER=8
[2025-11-22 09:48:34] Starting ATLAS job with PandaID=6894258302
[2025-11-22 09:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:46:53]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:46:53] 2025-11-23 14:46:17,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:46:53] 2025-11-23 14:46:17,465 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:46:53] 2025-11-23 14:46:17,479 | INFO     | sum of square deviations: 872996654867.0428
[2025-11-23 09:46:53] 2025-11-23 14:46:17,577 | INFO     | sum of deviations: 5263244413277.532
[2025-11-23 09:46:53] 2025-11-23 14:46:17,578 | INFO     | mean x: 1763866053.5750709
[2025-11-23 09:46:53] 2025-11-23 14:46:17,578 | INFO     | mean y: 2886683.452549575
[2025-11-23 09:46:53] 2025-11-23 14:46:17,578 | INFO     | intersect: -10631355842.554356
[2025-11-23 09:46:53] 2025-11-23 14:46:17,579 | INFO     | chi2: 12.829580486582364
[2025-11-23 09:46:53] 2025-11-23 14:46:17,580 | INFO     | sum of square deviations: 863756947330.4371
[2025-11-23 09:46:53] 2025-11-23 14:46:17,651 | INFO     | sum of deviations: 5772822914392.449
[2025-11-23 09:46:53] 2025-11-23 14:46:17,651 | INFO     | mean x: 1763865901.082445
[2025-11-23 09:46:53] 2025-11-23 14:46:17,651 | INFO     | mean y: 2895095.4271499645
[2025-11-23 09:46:53] 2025-11-23 14:46:17,651 | INFO     | intersect: -11785705300.962868
[2025-11-23 09:46:53] 2025-11-23 14:46:17,656 | INFO     | chi2: 9.204102745974971
[2025-11-23 09:46:53] 2025-11-23 14:46:17,657 | INFO     | current chi2=9.204102745974971 (change=28.25873959323181 %)
[2025-11-23 09:46:53] 2025-11-23 14:46:17,658 | INFO     | sum of square deviations: 854582682881.1769
[2025-11-23 09:46:53] 2025-11-23 14:46:17,734 | INFO     | sum of deviations: 6239772765641.085
[2025-11-23 09:46:53] 2025-11-23 14:46:17,734 | INFO     | mean x: 1763865748.5898716
[2025-11-23 09:46:53] 2025-11-23 14:46:17,735 | INFO     | mean y: 2902853.6540656206
[2025-11-23 09:46:53] 2025-11-23 14:46:17,735 | INFO     | intersect: -12876039910.774174
[2025-11-23 09:46:53] 2025-11-23 14:46:17,736 | INFO     | chi2: 5.993314800687351
[2025-11-23 09:46:53] 2025-11-23 14:46:17,736 | INFO     | current chi2=5.993314800687351 (change=34.884312288796686 %)
[2025-11-23 09:46:53] 2025-11-23 14:46:17,741 | INFO     | sum of square deviations: 845472944426.2715
[2025-11-23 09:46:53] 2025-11-23 14:46:17,792 | INFO     | time since job start (86235s) is within the limit (172800.0s)
[2025-11-23 09:46:53] 2025-11-23 14:46:17,820 | INFO     | sum of deviations: 6279015425152.369
[2025-11-23 09:46:53] 2025-11-23 14:46:17,821 | INFO     | mean x: 1763865596.091625
[2025-11-23 09:46:53] 2025-11-23 14:46:17,821 | INFO     | mean y: 2903507.809591983
[2025-11-23 09:46:53] 2025-11-23 14:46:17,821 | INFO     | intersect: -13096675087.54155
[2025-11-23 09:46:53] 2025-11-23 14:46:17,822 | INFO     | chi2: 5.800355405732522
[2025-11-23 09:46:53] 2025-11-23 14:46:17,822 | INFO     | current chi2=5.800355405732522 (change=3.2195771684260457 %)
[2025-11-23 09:46:53] 2025-11-23 14:46:17,822 | INFO     | right removable region: 1396
[2025-11-23 09:46:53] 2025-11-23 14:46:17,823 | INFO     | sum of square deviations: 863755160030.4362
[2025-11-23 09:46:53] 2025-11-23 14:46:17,941 | INFO     | sum of deviations: 4713589142074.086
[2025-11-23 09:46:53] 2025-11-23 14:46:17,941 | INFO     | mean x: 1763866206.082445
[2025-11-23 09:46:53] 2025-11-23 14:46:17,941 | INFO     | mean y: 2895753.473347548
[2025-11-23 09:46:53] 2025-11-23 14:46:17,941 | INFO     | intersect: -9622679851.503252
[2025-11-23 09:46:53] 2025-11-23 14:46:17,942 | INFO     | chi2: 9.006861598998999
[2025-11-23 09:46:53] 2025-11-23 14:46:17,942 | INFO     | current chi2=9.006861598998999 (change=29.79613317505823 %)
[2025-11-23 09:46:53] 2025-11-23 14:46:17,947 | INFO     | sum of square deviations: 854579193867.3551
[2025-11-23 09:46:53] 2025-11-23 14:46:18,013 | INFO     | sum of deviations: 4372076170516.714
[2025-11-23 09:46:53] 2025-11-23 14:46:18,013 | INFO     | mean x: 1763866358.5891583
[2025-11-23 09:46:53] 2025-11-23 14:46:18,014 | INFO     | mean y: 2901424.862339515
[2025-11-23 09:46:53] 2025-11-23 14:46:18,014 | INFO     | intersect: -9021140032.857426
[2025-11-23 09:46:53] 2025-11-23 14:46:18,015 | INFO     | chi2: 7.438051263111293
[2025-11-23 09:46:53] 2025-11-23 14:46:18,015 | INFO     | current chi2=7.438051263111293 (change=17.41794651382296 %)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,015 | INFO     | left removable region: 20
[2025-11-23 09:46:53] 2025-11-23 14:46:18,020 | INFO     | sum of square deviations: 807915390583.628
[2025-11-23 09:46:53] 2025-11-23 14:46:18,084 | INFO     | sum of deviations: 5178837959550.11
[2025-11-23 09:46:53] 2025-11-23 14:46:18,084 | INFO     | mean x: 1763866175.6155524
[2025-11-23 09:46:53] 2025-11-23 14:46:18,084 | INFO     | mean y: 2921894.499273256
[2025-11-23 09:46:53] 2025-11-23 14:46:18,084 | INFO     | intersect: -11303679282.197527
[2025-11-23 09:46:53] 2025-11-23 14:46:18,085 | INFO     | chi2: 0.25670980106410063
[2025-11-23 09:46:53] 2025-11-23 14:46:18,085 | INFO     | current memory leak: 6.41 B/s (using 1376 data points, chi2=0.26)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,086 | INFO     | could have reported an average CPU frequency of 3141 MHz (51 samples)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,086 | INFO     | ..............................
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . Timing measurements:
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . get job = 0 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . initial setup = 3 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . payload setup = 25 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . stage-in = 0 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . payload execution = 86141 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . stage-out = 10 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | . log creation = 4 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,087 | INFO     | ..............................
[2025-11-23 09:46:53] 2025-11-23 14:46:18,216 | INFO     | 
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | job summary report
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | --------------------------------------------------
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | PanDA job id: 6894258302
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | task id: 47533967
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | errors: (none)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | pilot state: finished 
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | transexitcode: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | exeerrorcode: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | exeerrordiag: 
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | exitcode: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | exitmsg: OK
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | cpuconsumptiontime: 204624 s
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | nevents: 1000
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | neventsw: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | pid: 3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:18,217 | INFO     | pgrp: 3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | corecount: 8
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | event service: False
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | sizes: {0: 2297979, 1: 2298835, 12: 2298835, 17: 2299125, 22: 2299153, 86170: 2363389, 86171: 2363516, 86181: 2372566, 86184: 2372622, 86199: 2372868}
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | --------------------------------------------------
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | 
[2025-11-23 09:46:53] 2025-11-23 14:46:18,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | job 6894258302 has completed (purged errors)
[2025-11-23 09:46:53] 2025-11-23 14:46:18,380 | INFO     | overall cleanup function is called
[2025-11-23 09:46:53] 2025-11-23 14:46:19,432 | INFO     | --- collectZombieJob: --- 10, [3847945]
[2025-11-23 09:46:53] 2025-11-23 14:46:19,433 | INFO     | zombie collector waiting for pid 3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:19,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:46:53] 2025-11-23 14:46:19,433 | INFO     | collected zombie processes
[2025-11-23 09:46:53] 2025-11-23 14:46:19,433 | INFO     | will attempt to kill all subprocesses of pid=3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:21,664 | INFO     | process IDs to be killed: [3847945] (in reverse order)
[2025-11-23 09:46:53] 2025-11-23 14:46:21,866 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:46:53] 2025-11-23 14:46:21,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:46:53] 2025-11-23 14:46:21,988 | INFO     | did not find any defunct processes belonging to 3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:22,090 | INFO     | did not find any defunct processes belonging to 3847945
[2025-11-23 09:46:53] 2025-11-23 14:46:22,094 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:46:53] 2025-11-23 14:46:22,094 | INFO     | ready for new job
[2025-11-23 09:46:53] 2025-11-23 14:46:22,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:46:53] 2025-11-23 14:46:22,099 | INFO     | ***************************************
[2025-11-23 09:46:53] 2025-11-23 14:46:22,099 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:46:53] 2025-11-23 14:46:22,099 | INFO     | ***************************************
[2025-11-23 09:46:53] 2025-11-23 14:46:22,099 | INFO     | 
[2025-11-23 09:46:53] 2025-11-23 14:46:22,104 | INFO     | architecture information:
[2025-11-23 09:46:53] 2025-11-23 14:46:22,113 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:46:53] 2025-11-23 14:46:22,170 | INFO     | cat /etc/os-release:
[2025-11-23 09:46:53] NAME="CentOS Linux"
[2025-11-23 09:46:53] VERSION="7 (Core)"
[2025-11-23 09:46:53] ID="centos"
[2025-11-23 09:46:53] ID_LIKE="rhel fedora"
[2025-11-23 09:46:53] VERSION_ID="7"
[2025-11-23 09:46:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:46:53] ANSI_COLOR="0;31"
[2025-11-23 09:46:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:46:53] HOME_URL="https://www.centos.org/"
[2025-11-23 09:46:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:46:53] 
[2025-11-23 09:46:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:46:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:46:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:46:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:46:53] 
[2025-11-23 09:46:53] 2025-11-23 14:46:22,170 | INFO     | ***************************************
[2025-11-23 09:46:53] 2025-11-23 14:46:22,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 09:46:53] 2025-11-23 14:46:22,761 | INFO     | sufficient remaining disk space (67726475264 B)
[2025-11-23 09:46:53] 2025-11-23 14:46:22,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:46:53] 2025-11-23 14:46:22,762 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:46:53] 2025-11-23 14:46:22,762 | INFO     | update_server=False
[2025-11-23 09:46:53] 2025-11-23 14:46:22,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:46:53] 2025-11-23 14:46:22,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:46:53] 2025-11-23 14:46:22,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:46:53] 2025-11-23 14:46:22,765 | INFO     | aborting loop
[2025-11-23 09:46:53] 2025-11-23 14:46:22,941 | INFO     | all data control threads have been joined
[2025-11-23 09:46:53] 2025-11-23 14:46:22,961 | INFO     | all payload control threads have been joined
[2025-11-23 09:46:53] 2025-11-23 14:46:23,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:46:53] 2025-11-23 14:46:23,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:46:53] 2025-11-23 14:46:23,768 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:23,771 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:23,967 | INFO     | [data] control thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:23,967 | INFO     | [payload] control thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,242 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,313 | INFO     | all job control threads have been joined
[2025-11-23 09:46:53] 2025-11-23 14:46:24,569 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,640 | INFO     | [job] validate thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,641 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,719 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,767 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:24,768 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:25,119 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:25,319 | INFO     | [job] control thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:25,730 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:26,783 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:46:53] 2025-11-23 14:46:36,546 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:46:53] 2025-11-23 14:46:37,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839629981504)>', '<ExcThread(monitor, started 139839135528704)>']
[2025-11-23 09:46:53] 2025-11-23 14:46:42,579 | INFO     | all workflow threads have been joined
[2025-11-23 09:46:53] 2025-11-23 14:46:42,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:46:53] 2025-11-23 14:46:42,580 | INFO     | traces error code: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:42,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:46:53] 2025-11-23 14:46:51,772 | INFO     | PID=3833246 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 09:46:53] 2025-11-23 14:46:51,772 | INFO     | .. there are 44 such processes running
[2025-11-23 09:46:53] 2025-11-23 14:46:51,773 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:46:53] 2025-11-23 14:46:51,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:46:53] 2025-11-23 14:46:51,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:46:53] 2025-11-23 14:46:51,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:46:53] 2025-11-23 14:46:51,773 | INFO     | [monitor] control thread has ended
[2025-11-23 09:46:53] 2025-11-23 14:46:52,018 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:46:53] 2025-11-23 14:46:52,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:46:53] 2025-11-23 14:46:52,065 [wrapper] pilotpid: 3833246
[2025-11-23 09:46:53] 2025-11-23 14:46:52,068 [wrapper] Pilot exit status: 0
[2025-11-23 09:46:53] 2025-11-23 14:46:52,091 [wrapper] pandaids: 6894258302
[2025-11-23 09:46:53] 2025-11-23 14:46:52,709 [wrapper] cleanup supervisor_pilot 1807355 3833247
[2025-11-23 09:46:53] 2025-11-23 14:46:52,723 [wrapper] Test setup, not cleaning
[2025-11-23 09:46:53] 2025-11-23 14:46:52,728 [wrapper] apfmon messages muted
[2025-11-23 09:46:53] 2025-11-23 14:46:52,743 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:46:53] 2025-11-23 14:46:52,770 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:46:53]  *** Error codes and diagnostics ***
[2025-11-23 09:46:53]     "exeErrorCode": 0,
[2025-11-23 09:46:53]     "exeErrorDiag": "",
[2025-11-23 09:46:53]     "pilotErrorCode": 0,
[2025-11-23 09:46:53]     "pilotErrorDiag": "",
[2025-11-23 09:46:53]  *** Listing of results directory ***
[2025-11-23 09:46:53] total 1331728
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:57 queuedata.json
[2025-11-23 09:46:53] -rwx------. 1 boincer umatlas     36292 Nov 20 22:58 runpilot2-wrapper.sh
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas       100 Nov 22 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:46:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 09:48 run_atlas
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas       105 Nov 22 09:48 job.xml
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas 410085009 Nov 22 09:48 EVNT.47493127._002175.pool.root.1
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 09:48 start_atlas.sh
[2025-11-23 09:46:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 09:48 shared
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas    590110 Nov 22 09:48 input.tar.gz
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas         0 Nov 22 09:48 boinc_lockfile
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 09:48 pandaJob.out
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas        57 Nov 22 09:48 setup.sh.local
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas    989768 Nov 22 09:48 agis_schedconf.cvmfs.json
[2025-11-23 09:46:53] drwx------. 5 boincer umatlas      4096 Nov 22 09:49 pilot3
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas       533 Nov 23 09:32 boinc_task_state.xml
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas      6948 Nov 23 09:39 init_data.xml
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas 924099433 Nov 23 09:45 HITS.47533967._001467.pool.root.1
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas      1066 Nov 23 09:45 memory_monitor_summary.json
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas   1526164 Nov 23 09:45 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas   2402840 Nov 23 09:45 log.47533967._001467.job.log.tgz.1
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas      8635 Nov 23 09:46 heartbeat.json
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 09:46 boinc_mmap_file
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas        29 Nov 23 09:46 wrapper_checkpoint.txt
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas       823 Nov 23 09:46 pilotlog.txt
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas        95 Nov 23 09:46 pilot_heartbeat.json
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas  10384355 Nov 23 09:46 log.47533967._001467.job.log.1
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas       353 Nov 23 09:46 output.list
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas       620 Nov 23 09:46 runtime_log
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas  12810240 Nov 23 09:46 result.tar.gz
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 09:46 runtime_log.err
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas       664 Nov 23 09:46 1wwMDmYTXg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiIHKDmwcsyTm.diag
[2025-11-23 09:46:53] -rw-r--r--. 1 boincer umatlas     21166 Nov 23 09:46 stderr.txt
[2025-11-23 09:46:53] HITS file was successfully produced:
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas 924099433 Nov 23 09:45 shared/HITS.pool.root.1
[2025-11-23 09:46:53]  *** Contents of shared directory: ***
[2025-11-23 09:46:53] total 1316036
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas 410085009 Nov 22 09:48 ATLAS.root_0
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 09:48 start_atlas.sh
[2025-11-23 09:46:53] -rw-r--r--. 2 boincer umatlas    590110 Nov 22 09:48 input.tar.gz
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas 924099433 Nov 23 09:45 HITS.pool.root.1
[2025-11-23 09:46:53] -rw-------. 1 boincer umatlas  12810240 Nov 23 09:46 result.tar.gz
09:46:54 (3829262): run_atlas exited; CPU time 206687.684728
09:46:54 (3829262): called boinc_finish(0)

</stderr_txt>
]]>

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