Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (3177242): wrapper (7.7.26015): starting
00:02:45 (3177242): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 00:02:45] Arguments: --nthreads 9
[2025-11-23 00:02:45] Threads: 9
[2025-11-23 00:02:45] Checking for CVMFS
[2025-11-23 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:02:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:02:47] 2.13.3.0 9428 23589 335648 153197 3 570 16540875 18491393 22180 16776704 0 119644928 99.331 192537500 33561 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 00:02:47] CVMFS is ok
[2025-11-23 00:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:02:47] Further information can be found at the LHC@home message board.
[2025-11-23 00:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:02:47] Checking for apptainer binary...
[2025-11-23 00:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:02:47] Running /usr/bin/apptainer --version
[2025-11-23 00:02:47] apptainer version 1.4.4-1.el9
[2025-11-23 00:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:02:48] c-8-38.aglt2.org
[2025-11-23 00:02:48] apptainer works
[2025-11-23 00:02:48] Set ATHENA_PROC_NUMBER=9
[2025-11-23 00:02:48] Set ATHENA_CORE_NUMBER=9
[2025-11-23 00:02:48] Starting ATLAS job with PandaID=6894261676
[2025-11-23 00:02:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:08:00]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:08:00] 2025-11-24 06:07:13,408 | INFO     | time since job start (90211s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:15,416 | INFO     | time since job start (90213s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:15,512 | INFO     | monitor loop #4910: job 0:6894261676 is in state 'finished'
[2025-11-24 01:08:00] 2025-11-24 06:07:15,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:08:00] 2025-11-24 06:07:17,424 | INFO     | time since job start (90215s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:18,021 | INFO     | monitor loop #4911: job 0:6894261676 is in state 'finished'
[2025-11-24 01:08:00] 2025-11-24 06:07:18,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:08:00] 2025-11-24 06:07:19,431 | INFO     | time since job start (90217s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:20,640 | INFO     | monitor loop #4912: job 0:6894261676 is in state 'finished'
[2025-11-24 01:08:00] 2025-11-24 06:07:20,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:08:00] 2025-11-24 06:07:21,440 | INFO     | time since job start (90219s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:23,219 | INFO     | monitor loop #4913: job 0:6894261676 is in state 'finished'
[2025-11-24 01:08:00] 2025-11-24 06:07:23,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:08:00] 2025-11-24 06:07:23,447 | INFO     | time since job start (90221s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:25,454 | INFO     | time since job start (90223s) is within the limit (172800.0s)
[2025-11-24 01:08:00] 2025-11-24 06:07:25,723 | INFO     | monitor loop #4914: job 0:6894261676 is in state 'finished'
[2025-11-24 01:08:00] 2025-11-24 06:07:25,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:08:00] 2025-11-24 06:07:25,943 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:08:00] 2025-11-24 06:07:25,983 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2460499999993
[2025-11-24 01:08:00] 2025-11-24 06:07:25,998 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894261676/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,000 | INFO     | extracted standard info from prmon json
[2025-11-24 01:08:00] 2025-11-24 06:07:26,000 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:08:00] 2025-11-24 06:07:26,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:08:00] 2025-11-24 06:07:26,101 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:08:00] 2025-11-24 06:07:26,127 | INFO     | sum of square deviations: 998907366566.2417
[2025-11-24 01:08:00] 2025-11-24 06:07:26,249 | INFO     | sum of deviations: 5821578040467.672
[2025-11-24 01:08:00] 2025-11-24 06:07:26,249 | INFO     | mean x: 1763919356.3215978
[2025-11-24 01:08:00] 2025-11-24 06:07:26,249 | INFO     | mean y: 3011342.057549086
[2025-11-24 01:08:00] 2025-11-24 06:07:26,249 | INFO     | intersect: -10277015148.503645
[2025-11-24 01:08:00] 2025-11-24 06:07:26,255 | INFO     | chi2: 18.525751976171513
[2025-11-24 01:08:00] 2025-11-24 06:07:26,258 | INFO     | sum of square deviations: 988798500524.5198
[2025-11-24 01:08:00] 2025-11-24 06:07:26,365 | INFO     | sum of deviations: 6343595558670.578
[2025-11-24 01:08:00] 2025-11-24 06:07:26,365 | INFO     | mean x: 1763919203.8491848
[2025-11-24 01:08:00] 2025-11-24 06:07:26,366 | INFO     | mean y: 3019214.5251358696
[2025-11-24 01:08:00] 2025-11-24 06:07:26,366 | INFO     | intersect: -11313330902.769522
[2025-11-24 01:08:00] 2025-11-24 06:07:26,372 | INFO     | chi2: 15.191827458034526
[2025-11-24 01:08:00] 2025-11-24 06:07:26,372 | INFO     | current chi2=15.191827458034526 (change=17.996162975868405 %)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,372 | INFO     | right removable region: 1471
[2025-11-24 01:08:00] 2025-11-24 06:07:26,374 | INFO     | sum of square deviations: 988791092973.8206
[2025-11-24 01:08:00] 2025-11-24 06:07:26,592 | INFO     | sum of deviations: 5256146160466.079
[2025-11-24 01:08:00] 2025-11-24 06:07:26,597 | INFO     | mean x: 1763919508.8498642
[2025-11-24 01:08:00] 2025-11-24 06:07:26,597 | INFO     | mean y: 3019865.647418478
[2025-11-24 01:08:00] 2025-11-24 06:07:26,597 | INFO     | intersect: -9373499421.079103
[2025-11-24 01:08:00] 2025-11-24 06:07:26,599 | INFO     | chi2: 15.171634184179963
[2025-11-24 01:08:00] 2025-11-24 06:07:26,599 | INFO     | current chi2=15.171634184179963 (change=18.105164078120755 %)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,599 | INFO     | left removable region: 10
[2025-11-24 01:08:00] 2025-11-24 06:07:26,605 | INFO     | sum of square deviations: 966785140531.4127
[2025-11-24 01:08:00] 2025-11-24 06:07:26,683 | INFO     | sum of deviations: 5405015556830.205
[2025-11-24 01:08:00] 2025-11-24 06:07:26,684 | INFO     | mean x: 1763919478.4099932
[2025-11-24 01:08:00] 2025-11-24 06:07:26,684 | INFO     | mean y: 3036524.575633128
[2025-11-24 01:08:00] 2025-11-24 06:07:26,684 | INFO     | intersect: -9858526114.421148
[2025-11-24 01:08:00] 2025-11-24 06:07:26,686 | INFO     | chi2: 8.943209894917395
[2025-11-24 01:08:00] 2025-11-24 06:07:26,686 | INFO     | current memory leak: 5.59 B/s (using 1461 data points, chi2=8.94)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,688 | INFO     | could have reported an average CPU frequency of 2600 MHz (52 samples)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,688 | INFO     | ..............................
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . Timing measurements:
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . get job = 0 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . initial setup = 4 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . payload setup = 22 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . stage-in = 0 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . payload execution = 90093 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . stage-out = 8 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,689 | INFO     | . log creation = 1 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,690 | INFO     | ..............................
[2025-11-24 01:08:00] 2025-11-24 06:07:26,892 | INFO     | 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,892 | INFO     | job summary report
[2025-11-24 01:08:00] 2025-11-24 06:07:26,892 | INFO     | --------------------------------------------------
[2025-11-24 01:08:00] 2025-11-24 06:07:26,892 | INFO     | PanDA job id: 6894261676
[2025-11-24 01:08:00] 2025-11-24 06:07:26,893 | INFO     | task id: 47533967
[2025-11-24 01:08:00] 2025-11-24 06:07:26,893 | INFO     | errors: (none)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,893 | INFO     | pilot state: finished 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | transexitcode: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | exeerrorcode: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | exeerrordiag: 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | exitcode: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | exitmsg: OK
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | cpuconsumptiontime: 292447 s
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | nevents: 1000
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | neventsw: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:26,894 | INFO     | pid: 3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | pgrp: 3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | corecount: 9
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | event service: False
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | sizes: {0: 2298529, 1: 2298585, 2: 2298641, 3: 2298840, 15: 2298840, 26: 2298868, 29: 2299286, 37: 2299314, 90120: 2364619, 90121: 2364618, 90129: 2373668, 90131: 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | --------------------------------------------------
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | 
[2025-11-24 01:08:00] 2025-11-24 06:07:26,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 01:08:00] 2025-11-24 06:07:26,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | job 6894261676 has completed (purged errors)
[2025-11-24 01:08:00] 2025-11-24 06:07:26,954 | INFO     | overall cleanup function is called
[2025-11-24 01:08:00] 2025-11-24 06:07:28,045 | INFO     | --- collectZombieJob: --- 10, [3200102]
[2025-11-24 01:08:00] 2025-11-24 06:07:28,045 | INFO     | zombie collector waiting for pid 3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:28,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:08:00] 2025-11-24 06:07:28,045 | INFO     | collected zombie processes
[2025-11-24 01:08:00] 2025-11-24 06:07:28,045 | INFO     | will attempt to kill all subprocesses of pid=3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:29,905 | INFO     | process IDs to be killed: [3200102] (in reverse order)
[2025-11-24 01:08:00] 2025-11-24 06:07:30,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:08:00] 2025-11-24 06:07:30,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:08:00] 2025-11-24 06:07:30,333 | INFO     | did not find any defunct processes belonging to 3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:30,359 | INFO     | did not find any defunct processes belonging to 3200102
[2025-11-24 01:08:00] 2025-11-24 06:07:30,364 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:08:00] 2025-11-24 06:07:30,364 | INFO     | ready for new job
[2025-11-24 01:08:00] 2025-11-24 06:07:30,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:08:00] 2025-11-24 06:07:30,378 | INFO     | ***************************************
[2025-11-24 01:08:00] 2025-11-24 06:07:30,388 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:08:00] 2025-11-24 06:07:30,388 | INFO     | ***************************************
[2025-11-24 01:08:00] 2025-11-24 06:07:30,388 | INFO     | 
[2025-11-24 01:08:00] 2025-11-24 06:07:30,390 | INFO     | architecture information:
[2025-11-24 01:08:00] 2025-11-24 06:07:30,402 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:08:00] 2025-11-24 06:07:30,493 | INFO     | cat /etc/os-release:
[2025-11-24 01:08:00] NAME="CentOS Linux"
[2025-11-24 01:08:00] VERSION="7 (Core)"
[2025-11-24 01:08:00] ID="centos"
[2025-11-24 01:08:00] ID_LIKE="rhel fedora"
[2025-11-24 01:08:00] VERSION_ID="7"
[2025-11-24 01:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:08:00] ANSI_COLOR="0;31"
[2025-11-24 01:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:08:00] HOME_URL="https://www.centos.org/"
[2025-11-24 01:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:08:00] 
[2025-11-24 01:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:08:00] 
[2025-11-24 01:08:00] 2025-11-24 06:07:30,493 | INFO     | ***************************************
[2025-11-24 01:08:00] 2025-11-24 06:07:31,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 01:08:00] 2025-11-24 06:07:31,047 | INFO     | sufficient remaining disk space (89696239616 B)
[2025-11-24 01:08:00] 2025-11-24 06:07:31,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:08:00] 2025-11-24 06:07:31,047 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:08:00] 2025-11-24 06:07:31,047 | INFO     | update_server=False
[2025-11-24 01:08:00] 2025-11-24 06:07:31,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:08:00] 2025-11-24 06:07:31,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:08:00] 2025-11-24 06:07:31,774 | INFO     | all data control threads have been joined
[2025-11-24 01:08:00] 2025-11-24 06:07:31,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:08:00] 2025-11-24 06:07:31,780 | INFO     | aborting loop
[2025-11-24 01:08:00] 2025-11-24 06:07:32,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:08:00] 2025-11-24 06:07:32,056 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:08:00] 2025-11-24 06:07:32,166 | INFO     | all payload control threads have been joined
[2025-11-24 01:08:00] 2025-11-24 06:07:32,208 | INFO     | all job control threads have been joined
[2025-11-24 01:08:00] 2025-11-24 06:07:32,257 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,530 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,592 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,735 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,785 | INFO     | [data] control thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:32,786 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,035 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,058 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,169 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,178 | INFO     | [payload] control thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,246 | INFO     | [job] control thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,310 | INFO     | [job] validate thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:33,515 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:36,108 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:08:00] 2025-11-24 06:07:36,183 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:08:00] 2025-11-24 06:07:37,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118259246912)>', '<ExcThread(monitor, started 140117536667392)>']
[2025-11-24 01:08:00] 2025-11-24 06:07:42,851 | INFO     | all workflow threads have been joined
[2025-11-24 01:08:00] 2025-11-24 06:07:42,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:08:00] 2025-11-24 06:07:42,851 | INFO     | traces error code: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:42,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:08:00] 2025-11-24 06:07:59,385 | INFO     | PID=3184601 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 01:08:00] 2025-11-24 06:07:59,386 | INFO     | .. there are 39 such processes running
[2025-11-24 01:08:00] 2025-11-24 06:07:59,386 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:08:00] 2025-11-24 06:07:59,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:08:00] 2025-11-24 06:07:59,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:08:00] 2025-11-24 06:07:59,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:08:00] 2025-11-24 06:07:59,387 | INFO     | [monitor] control thread has ended
[2025-11-24 01:08:00] 2025-11-24 06:07:59,678 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:08:00] 2025-11-24 06:07:59,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:08:00] 2025-11-24 06:07:59,717 [wrapper] pilotpid: 3184601
[2025-11-24 01:08:00] 2025-11-24 06:07:59,725 [wrapper] Pilot exit status: 0
[2025-11-24 01:08:00] 2025-11-24 06:07:59,806 [wrapper] pandaids: 6894261676
[2025-11-24 01:08:00] 2025-11-24 06:08:00,214 [wrapper] cleanup supervisor_pilot 3398795 3184602
[2025-11-24 01:08:00] 2025-11-24 06:08:00,278 [wrapper] Test setup, not cleaning
[2025-11-24 01:08:00] 2025-11-24 06:08:00,282 [wrapper] apfmon messages muted
[2025-11-24 01:08:00] 2025-11-24 06:08:00,285 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:08:00] 2025-11-24 06:08:00,288 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:08:00]  *** Error codes and diagnostics ***
[2025-11-24 01:08:00]     "exeErrorCode": 0,
[2025-11-24 01:08:00]     "exeErrorDiag": "",
[2025-11-24 01:08:00]     "pilotErrorCode": 0,
[2025-11-24 01:08:00]     "pilotErrorDiag": "",
[2025-11-24 01:08:00]  *** Listing of results directory ***
[2025-11-24 01:08:00] total 1329544
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 23:12 pilot3.tar.gz
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 23:36 queuedata.json
[2025-11-24 01:08:00] -rwx------. 1 boincer umatlas     36292 Nov 20 23:39 runpilot2-wrapper.sh
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:08:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:02 run_atlas
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:02 job.xml
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas 410321918 Nov 23 00:02 EVNT.47493127._002194.pool.root.1
[2025-11-24 01:08:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:02 shared
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas    590103 Nov 23 00:02 input.tar.gz
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:02 boinc_lockfile
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:02 pandaJob.out
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas        57 Nov 23 00:02 setup.sh.local
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas    989784 Nov 23 00:03 agis_schedconf.cvmfs.json
[2025-11-24 01:08:00] drwx------. 5 boincer umatlas      4096 Nov 23 00:03 pilot3
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas       532 Nov 24 00:37 boinc_task_state.xml
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas      6662 Nov 24 01:03 init_data.xml
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas 920472208 Nov 24 01:05 HITS.47533967._001652.pool.root.1
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas      1066 Nov 24 01:06 memory_monitor_summary.json
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas   1526164 Nov 24 01:06 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas   2566732 Nov 24 01:06 log.47533967._001652.job.log.tgz.1
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas      8626 Nov 24 01:07 heartbeat.json
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 01:07 boinc_mmap_file
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas        28 Nov 24 01:07 wrapper_checkpoint.txt
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas        95 Nov 24 01:07 pilot_heartbeat.json
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas       823 Nov 24 01:07 pilotlog.txt
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas  10801591 Nov 24 01:08 log.47533967._001652.job.log.1
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas       353 Nov 24 01:08 output.list
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas       620 Nov 24 01:08 runtime_log
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas  13383680 Nov 24 01:08 result.tar.gz
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas      9333 Nov 24 01:08 runtime_log.err
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas       660 Nov 24 01:08 FHIKDmX6Xg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm01IKDm3uz0dn.diag
[2025-11-24 01:08:00] -rw-r--r--. 1 boincer umatlas     21816 Nov 24 01:08 stderr.txt
[2025-11-24 01:08:00] HITS file was successfully produced:
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas 920472208 Nov 24 01:05 shared/HITS.pool.root.1
[2025-11-24 01:08:00]  *** Contents of shared directory: ***
[2025-11-24 01:08:00] total 1313284
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas 410321918 Nov 23 00:02 ATLAS.root_0
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas    590103 Nov 23 00:02 input.tar.gz
[2025-11-24 01:08:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:02 start_atlas.sh
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas 920472208 Nov 24 01:05 HITS.pool.root.1
[2025-11-24 01:08:00] -rw-------. 1 boincer umatlas  13383680 Nov 24 01:08 result.tar.gz
01:08:02 (3177242): run_atlas exited; CPU time 294871.138415
01:08:02 (3177242): called boinc_finish(0)

</stderr_txt>
]]>

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