Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:50 (1664546): wrapper (7.7.26015): starting
21:22:50 (1664546): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 21:22:50] Arguments: --nthreads 8
[2025-11-23 21:22:50] Threads: 8
[2025-11-23 21:22:50] Checking for CVMFS
[2025-11-23 21:22:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:22:51] 2.13.3.0 9863 26430 305476 153229 2 165 32690785 32935936 20421 16776704 0 152152206 99.801 80329190 33580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 21:22:51] CVMFS is ok
[2025-11-23 21:22:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:22:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:22:51] Further information can be found at the LHC@home message board.
[2025-11-23 21:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:22:51] Checking for apptainer binary...
[2025-11-23 21:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:22:51] Running /usr/bin/apptainer --version
[2025-11-23 21:22:51] apptainer version 1.4.4-1.el9
[2025-11-23 21:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:22:51] c-5-3.aglt2.org
[2025-11-23 21:22:51] apptainer works
[2025-11-23 21:22:51] Set ATHENA_PROC_NUMBER=8
[2025-11-23 21:22:51] Set ATHENA_CORE_NUMBER=8
[2025-11-23 21:22:51] Starting ATLAS job with PandaID=6894289272
[2025-11-23 21:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:04:37]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:04:37] 2025-11-24 16:53:22,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 13:04:37] 2025-11-24 16:53:22,243 | INFO     | fitting pss+swap vs Time
[2025-11-24 13:04:37] 2025-11-24 16:53:22,245 | INFO     | sum of square deviations: 194490756120.9429
[2025-11-24 13:04:37] 2025-11-24 16:53:22,262 | INFO     | sum of deviations: 1309390743133.1729
[2025-11-24 13:04:37] 2025-11-24 16:53:22,263 | INFO     | mean x: 1763977086.9918225
[2025-11-24 13:04:37] 2025-11-24 16:53:22,263 | INFO     | mean y: 2976051.8820093456
[2025-11-24 13:04:37] 2025-11-24 16:53:22,263 | INFO     | intersect: -11872833960.239168
[2025-11-24 13:04:37] 2025-11-24 16:53:22,264 | INFO     | chi2: 6.098692241560636
[2025-11-24 13:04:37] 2025-11-24 16:53:22,265 | INFO     | sum of square deviations: 191102616344.72635
[2025-11-24 13:04:37] 2025-11-24 16:53:22,281 | INFO     | sum of deviations: 1608598443246.2788
[2025-11-24 13:04:37] 2025-11-24 16:53:22,282 | INFO     | mean x: 1763976934.494712
[2025-11-24 13:04:37] 2025-11-24 16:53:22,282 | INFO     | mean y: 2989517.284371328
[2025-11-24 13:04:37] 2025-11-24 16:53:22,282 | INFO     | intersect: -14845214055.355211
[2025-11-24 13:04:37] 2025-11-24 16:53:22,283 | INFO     | chi2: 2.9098220874963165
[2025-11-24 13:04:37] 2025-11-24 16:53:22,283 | INFO     | current chi2=2.9098220874963165 (change=52.28776970139909 %)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,285 | INFO     | sum of square deviations: 187754058705.99457
[2025-11-24 13:04:37] 2025-11-24 16:53:22,297 | INFO     | sum of deviations: 1750959744984.6116
[2025-11-24 13:04:37] 2025-11-24 16:53:22,297 | INFO     | mean x: 1763976781.9976358
[2025-11-24 13:04:37] 2025-11-24 16:53:22,297 | INFO     | mean y: 2995997.806146572
[2025-11-24 13:04:37] 2025-11-24 16:53:22,298 | INFO     | intersect: -16447526337.915497
[2025-11-24 13:04:37] 2025-11-24 16:53:22,299 | INFO     | chi2: 2.0461418307703094
[2025-11-24 13:04:37] 2025-11-24 16:53:22,299 | INFO     | current chi2=2.0461418307703094 (change=29.681548588049218 %)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,300 | INFO     | sum of square deviations: 184444644582.23538
[2025-11-24 13:04:37] 2025-11-24 16:53:22,317 | INFO     | sum of deviations: 1739989144058.1282
[2025-11-24 13:04:37] 2025-11-24 16:53:22,317 | INFO     | mean x: 1763976629.4958384
[2025-11-24 13:04:37] 2025-11-24 16:53:22,317 | INFO     | mean y: 2995490.179548157
[2025-11-24 13:04:37] 2025-11-24 16:53:22,317 | INFO     | intersect: -16637770592.494898
[2025-11-24 13:04:37] 2025-11-24 16:53:22,318 | INFO     | chi2: 2.024934907911262
[2025-11-24 13:04:37] 2025-11-24 16:53:22,318 | INFO     | current chi2=2.024934907911262 (change=1.0364346469112302 %)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,318 | INFO     | right removable region: 840
[2025-11-24 13:04:37] 2025-11-24 16:53:22,318 | INFO     | sum of square deviations: 191102411628.7147
[2025-11-24 13:04:37] 2025-11-24 16:53:22,329 | INFO     | sum of deviations: 1101697924023.962
[2025-11-24 13:04:37] 2025-11-24 16:53:22,329 | INFO     | mean x: 1763977239.493537
[2025-11-24 13:04:37] 2025-11-24 16:53:22,329 | INFO     | mean y: 2985381.4477085783
[2025-11-24 13:04:37] 2025-11-24 16:53:22,329 | INFO     | intersect: -10166274368.927631
[2025-11-24 13:04:37] 2025-11-24 16:53:22,330 | INFO     | chi2: 4.259396967146352
[2025-11-24 13:04:37] 2025-11-24 16:53:22,330 | INFO     | current chi2=4.259396967146352 (change=30.158847201373355 %)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,331 | INFO     | sum of square deviations: 187753701306.9703
[2025-11-24 13:04:37] 2025-11-24 16:53:22,341 | INFO     | sum of deviations: 1051854858426.5037
[2025-11-24 13:04:37] 2025-11-24 16:53:22,341 | INFO     | mean x: 1763977391.9940898
[2025-11-24 13:04:37] 2025-11-24 16:53:22,341 | INFO     | mean y: 2987650.100472813
[2025-11-24 13:04:37] 2025-11-24 16:53:22,341 | INFO     | intersect: -9879364479.351866
[2025-11-24 13:04:37] 2025-11-24 16:53:22,342 | INFO     | chi2: 4.230088150608454
[2025-11-24 13:04:37] 2025-11-24 16:53:22,342 | INFO     | current chi2=4.230088150608454 (change=0.688097793278328 %)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,342 | INFO     | left removable region: 20
[2025-11-24 13:04:37] 2025-11-24 16:53:22,343 | INFO     | sum of square deviations: 170969856511.9802
[2025-11-24 13:04:37] 2025-11-24 16:53:22,353 | INFO     | sum of deviations: 1418051214173.8066
[2025-11-24 13:04:37] 2025-11-24 16:53:22,354 | INFO     | mean x: 1763977208.995122
[2025-11-24 13:04:37] 2025-11-24 16:53:22,354 | INFO     | mean y: 3010256.951219512
[2025-11-24 13:04:37] 2025-11-24 16:53:22,354 | INFO     | intersect: -14627697600.109985
[2025-11-24 13:04:37] 2025-11-24 16:53:22,354 | INFO     | chi2: 0.1349566438345183
[2025-11-24 13:04:37] 2025-11-24 16:53:22,355 | INFO     | current memory leak: 8.29 B/s (using 820 data points, chi2=0.13)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,355 | INFO     | could have reported an average CPU frequency of 2601 MHz (32 samples)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | ..............................
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . Timing measurements:
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . get job = 0 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . initial setup = 2 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . payload setup = 5 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . stage-in = 0 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . payload execution = 52180 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . stage-out = 3 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | . log creation = 0 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,356 | INFO     | ..............................
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | 
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | job summary report
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | --------------------------------------------------
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | PanDA job id: 6894289272
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | task id: 47533967
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | errors: (none)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | pilot state: finished 
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | transexitcode: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:22,415 | INFO     | exeerrorcode: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | exeerrordiag: 
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | exitcode: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | exitmsg: OK
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | cpuconsumptiontime: 297298 s
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | nevents: 1000
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | neventsw: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | pid: 1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | pgrp: 1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | corecount: 8
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | event service: False
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 52189: 2349650, 52190: 2349649, 52193: 2359490, 52197: 2359674, 52204: 2359920}
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | --------------------------------------------------
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | 
[2025-11-24 13:04:37] 2025-11-24 16:53:22,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 13:04:37] 2025-11-24 16:53:22,431 | INFO     | job 6894289272 has completed (purged errors)
[2025-11-24 13:04:37] 2025-11-24 16:53:22,432 | INFO     | overall cleanup function is called
[2025-11-24 13:04:37] 2025-11-24 16:53:23,444 | INFO     | --- collectZombieJob: --- 10, [1675426]
[2025-11-24 13:04:37] 2025-11-24 16:53:23,444 | INFO     | zombie collector waiting for pid 1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:23,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 13:04:37] 2025-11-24 16:53:23,445 | INFO     | collected zombie processes
[2025-11-24 13:04:37] 2025-11-24 16:53:23,445 | INFO     | will attempt to kill all subprocesses of pid=1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:23,864 | INFO     | process IDs to be killed: [1675426] (in reverse order)
[2025-11-24 13:04:37] 2025-11-24 16:53:23,966 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 13:04:37] 2025-11-24 16:53:23,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 13:04:37] 2025-11-24 16:53:23,977 | INFO     | did not find any defunct processes belonging to 1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:23,987 | INFO     | did not find any defunct processes belonging to 1675426
[2025-11-24 13:04:37] 2025-11-24 16:53:23,988 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 13:04:37] 2025-11-24 16:53:23,988 | INFO     | ready for new job
[2025-11-24 13:04:37] 2025-11-24 16:53:23,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 13:04:37] 2025-11-24 16:53:23,991 | INFO     | ***************************************
[2025-11-24 13:04:37] 2025-11-24 16:53:23,991 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 13:04:37] 2025-11-24 16:53:23,991 | INFO     | ***************************************
[2025-11-24 13:04:37] 2025-11-24 16:53:23,991 | INFO     | 
[2025-11-24 13:04:37] 2025-11-24 16:53:23,993 | INFO     | architecture information:
[2025-11-24 13:04:37] 2025-11-24 16:53:23,993 | INFO     | executing command: cat /etc/os-release
[2025-11-24 13:04:37] 2025-11-24 16:53:24,003 | INFO     | cat /etc/os-release:
[2025-11-24 13:04:37] NAME="CentOS Linux"
[2025-11-24 13:04:37] VERSION="7 (Core)"
[2025-11-24 13:04:37] ID="centos"
[2025-11-24 13:04:37] ID_LIKE="rhel fedora"
[2025-11-24 13:04:37] VERSION_ID="7"
[2025-11-24 13:04:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:04:37] ANSI_COLOR="0;31"
[2025-11-24 13:04:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:04:37] HOME_URL="https://www.centos.org/"
[2025-11-24 13:04:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:04:37] 
[2025-11-24 13:04:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:04:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:04:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:04:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:04:37] 
[2025-11-24 13:04:37] 2025-11-24 16:53:24,004 | INFO     | ***************************************
[2025-11-24 13:04:37] 2025-11-24 16:53:24,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 13:04:37] 2025-11-24 16:53:24,523 | INFO     | sufficient remaining disk space (70744276992 B)
[2025-11-24 13:04:37] 2025-11-24 16:53:24,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:04:37] 2025-11-24 16:53:24,524 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:04:37] 2025-11-24 16:53:24,524 | INFO     | update_server=False
[2025-11-24 13:04:37] 2025-11-24 16:53:24,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:04:37] 2025-11-24 16:53:24,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:04:37] 2025-11-24 16:53:24,525 | INFO     | aborting loop
[2025-11-24 13:04:37] 2025-11-24 16:53:24,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:04:37] 2025-11-24 16:53:24,927 | INFO     | all payload control threads have been joined
[2025-11-24 13:04:37] 2025-11-24 16:53:25,226 | INFO     | all data control threads have been joined
[2025-11-24 13:04:37] 2025-11-24 16:53:25,395 | INFO     | all job control threads have been joined
[2025-11-24 13:04:37] 2025-11-24 16:53:25,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:04:37] 2025-11-24 16:53:25,529 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:25,530 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:25,932 | INFO     | [payload] control thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:25,964 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,012 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,233 | INFO     | [data] control thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,394 | INFO     | [job] validate thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,400 | INFO     | [job] control thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,788 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,825 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,842 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:26,938 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:27,098 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:27,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:04:37] 2025-11-24 16:53:28,444 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:29,498 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:32,048 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:04:37] 2025-11-24 16:53:34,796 | INFO     | job.realtimelogging is not enabled
[2025-11-24 13:04:37] 2025-11-24 16:53:35,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:04:37] 2025-11-24 16:53:36,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846662289216)>', '<ExcThread(monitor, started 139845812877056)>']
[2025-11-24 13:04:37] 2025-11-24 16:53:41,836 | INFO     | all workflow threads have been joined
[2025-11-24 13:04:37] 2025-11-24 16:53:41,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:04:37] 2025-11-24 16:53:41,837 | INFO     | traces error code: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:41,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:04:37] 2025-11-24 16:53:54,049 | INFO     | PID=1668997 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 13:04:37] 2025-11-24 16:53:54,050 | INFO     | .. there are 43 such processes running
[2025-11-24 13:04:37] 2025-11-24 16:53:54,050 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:04:37] 2025-11-24 16:53:54,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:04:37] 2025-11-24 16:53:54,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:04:37] 2025-11-24 16:53:54,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:04:37] 2025-11-24 16:53:54,051 | INFO     | [monitor] control thread has ended
[2025-11-24 13:04:37] 2025-11-24 16:53:54,183 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:04:37] 2025-11-24 16:53:54,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:04:37] 2025-11-24 16:53:54,189 [wrapper] pilotpid: 1668997
[2025-11-24 13:04:37] 2025-11-24 16:53:54,191 [wrapper] Pilot exit status: 0
[2025-11-24 13:04:37] 2025-11-24 16:53:54,199 [wrapper] pandaids: 6894289272
[2025-11-24 13:04:37] 2025-11-24 16:53:54,279 [wrapper] cleanup supervisor_pilot  466597 1668998
[2025-11-24 13:04:37] 2025-11-24 16:53:54,284 [wrapper] Test setup, not cleaning
[2025-11-24 13:04:37] 2025-11-24 16:53:54,287 [wrapper] apfmon messages muted
[2025-11-24 13:04:37] 2025-11-24 16:53:54,289 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:04:37] 2025-11-24 16:53:54,292 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:04:37]  *** Error codes and diagnostics ***
[2025-11-24 13:04:37]     "exeErrorCode": 0,
[2025-11-24 13:04:37]     "exeErrorDiag": "",
[2025-11-24 13:04:37]     "pilotErrorCode": 0,
[2025-11-24 13:04:37]     "pilotErrorDiag": "",
[2025-11-24 13:04:37]  *** Listing of results directory ***
[2025-11-24 13:04:37] total 1319180
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:17 queuedata.json
[2025-11-24 13:04:37] -rwx------. 1 boincer umatlas     36292 Nov 21 06:18 runpilot2-wrapper.sh
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas       100 Nov 23 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:04:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 21:22 run_atlas
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas       105 Nov 23 21:22 job.xml
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas 410143633 Nov 23 21:22 EVNT.47493127._002402.pool.root.1
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:22 start_atlas.sh
[2025-11-24 13:04:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 21:22 shared
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 21:22 input.tar.gz
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas         0 Nov 23 21:22 boinc_lockfile
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 21:22 pandaJob.out
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas        57 Nov 23 21:22 setup.sh.local
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas    989786 Nov 23 21:23 agis_schedconf.cvmfs.json
[2025-11-24 13:04:37] drwx------. 5 boincer umatlas      4096 Nov 23 21:23 pilot3
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas       533 Nov 24 11:41 boinc_task_state.xml
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas 918310162 Nov 24 11:52 HITS.47533967._003739.pool.root.1
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas      1058 Nov 24 11:53 memory_monitor_summary.json
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas   1516227 Nov 24 11:53 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas   2076502 Nov 24 11:53 log.47533967._003739.job.log.tgz.1
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas      8612 Nov 24 11:53 heartbeat.json
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas       823 Nov 24 11:53 pilotlog.txt
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas        95 Nov 24 11:53 pilot_heartbeat.json
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas   7164181 Nov 24 11:53 log.47533967._003739.job.log.1
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas       353 Nov 24 11:53 output.list
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas       620 Nov 24 11:53 runtime_log
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas   9256960 Nov 24 11:53 result.tar.gz
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas       657 Nov 24 11:53 vEdMDmrKeg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxYHKDm9oah5m.diag
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 11:53 runtime_log.err
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas      6706 Nov 24 13:04 init_data.xml
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 13:04 boinc_mmap_file
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas        29 Nov 24 13:04 wrapper_checkpoint.txt
[2025-11-24 13:04:37] -rw-r--r--. 1 boincer umatlas     21121 Nov 24 13:04 stderr.txt
[2025-11-24 13:04:37] HITS file was successfully produced:
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas 918310162 Nov 24 11:52 shared/HITS.pool.root.1
[2025-11-24 13:04:37]  *** Contents of shared directory: ***
[2025-11-24 13:04:37] total 1306960
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas 410143633 Nov 23 21:22 ATLAS.root_0
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:22 start_atlas.sh
[2025-11-24 13:04:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 21:22 input.tar.gz
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas 918310162 Nov 24 11:52 HITS.pool.root.1
[2025-11-24 13:04:37] -rw-------. 1 boincer umatlas   9256960 Nov 24 11:53 result.tar.gz
13:04:39 (1664546): run_atlas exited; CPU time 298300.014910
13:04:39 (1664546): called boinc_finish(0)

</stderr_txt>
]]>

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