Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:26:44 (1265296): wrapper (7.7.26015): starting
00:26:44 (1265296): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 00:26:44] Arguments: --nthreads 9
[2025-11-22 00:26:44] Threads: 9
[2025-11-22 00:26:44] Checking for CVMFS
[2025-11-22 00:26:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:26:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:26:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:26:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:26:45] 2.13.2.0 5664 27592 194352 153161 3 96 22031273 39288832 7417 16776704 0 19217296 99.623 13799324 28091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:26:45] CVMFS is ok
[2025-11-22 00:26:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:26:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:26:45] Further information can be found at the LHC@home message board.
[2025-11-22 00:26:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:26:45] Checking for apptainer binary...
[2025-11-22 00:26:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:26:45] Running /usr/bin/apptainer --version
[2025-11-22 00:26:45] apptainer version 1.4.4-1.el9
[2025-11-22 00:26:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:26:45] c-210-30.aglt2.org
[2025-11-22 00:26:45] apptainer works
[2025-11-22 00:26:45] Set ATHENA_PROC_NUMBER=9
[2025-11-22 00:26:45] Set ATHENA_CORE_NUMBER=9
[2025-11-22 00:26:45] Starting ATLAS job with PandaID=6894288751
[2025-11-22 00:26:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:27:50]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:27:50] 2025-11-23 03:26:46,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:27:50] 2025-11-23 03:26:46,869 | INFO     | time since job start (79169s) is within the limit (172800.0s)
[2025-11-22 22:27:50] 2025-11-23 03:26:48,902 | INFO     | time since job start (79171s) is within the limit (172800.0s)
[2025-11-22 22:27:50] 2025-11-23 03:26:48,937 | INFO     | monitor loop #4968: job 0:6894288751 is in state 'finished'
[2025-11-22 22:27:50] 2025-11-23 03:26:48,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:27:50] 2025-11-23 03:26:51,601 | INFO     | monitor loop #4969: job 0:6894288751 is in state 'finished'
[2025-11-22 22:27:50] 2025-11-23 03:26:51,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:27:50] 2025-11-23 03:26:52,352 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8494999999994
[2025-11-22 22:27:50] 2025-11-23 03:26:52,359 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894288751/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,359 | INFO     | extracted standard info from prmon json
[2025-11-22 22:27:50] 2025-11-23 03:26:52,360 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:27:50] 2025-11-23 03:26:52,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:27:50] 2025-11-23 03:26:52,388 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:27:50] 2025-11-23 03:26:52,391 | INFO     | sum of square deviations: 676591406425.365
[2025-11-22 22:27:50] 2025-11-23 03:26:52,466 | INFO     | sum of deviations: 3963994962621.552
[2025-11-22 22:27:50] 2025-11-23 03:26:52,466 | INFO     | mean x: 1763828836.5728605
[2025-11-22 22:27:50] 2025-11-23 03:26:52,466 | INFO     | mean y: 3142225.8565921355
[2025-11-22 22:27:50] 2025-11-23 03:26:52,466 | INFO     | intersect: -10330729231.425537
[2025-11-22 22:27:50] 2025-11-23 03:26:52,468 | INFO     | chi2: 14.680971256430182
[2025-11-22 22:27:50] 2025-11-23 03:26:52,470 | INFO     | sum of square deviations: 668798175712.1387
[2025-11-22 22:27:50] 2025-11-23 03:26:52,508 | INFO     | PID=1269541 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 22:27:50] 2025-11-23 03:26:52,508 | INFO     | .. there are 7 such processes running
[2025-11-22 22:27:50] 2025-11-23 03:26:52,535 | INFO     | sum of deviations: 4432007429483.615
[2025-11-22 22:27:50] 2025-11-23 03:26:52,535 | INFO     | mean x: 1763828684.0828173
[2025-11-22 22:27:50] 2025-11-23 03:26:52,535 | INFO     | mean y: 3151381.919504644
[2025-11-22 22:27:50] 2025-11-23 03:26:52,535 | INFO     | intersect: -11685429891.29863
[2025-11-22 22:27:50] 2025-11-23 03:26:52,537 | INFO     | chi2: 11.502681545872264
[2025-11-22 22:27:50] 2025-11-23 03:26:52,538 | INFO     | current chi2=11.502681545872264 (change=21.649042526160148 %)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,538 | INFO     | right removable region: 1291
[2025-11-22 22:27:50] 2025-11-23 03:26:52,544 | INFO     | sum of square deviations: 668796140142.1384
[2025-11-22 22:27:50] 2025-11-23 03:26:52,650 | INFO     | sum of deviations: 3415310999751.472
[2025-11-22 22:27:50] 2025-11-23 03:26:52,650 | INFO     | mean x: 1763828989.0828173
[2025-11-22 22:27:50] 2025-11-23 03:26:52,650 | INFO     | mean y: 3152958.958204334
[2025-11-22 22:27:50] 2025-11-23 03:26:52,650 | INFO     | intersect: -9004112763.02217
[2025-11-22 22:27:50] 2025-11-23 03:26:52,652 | INFO     | chi2: 10.899843828733154
[2025-11-22 22:27:50] 2025-11-23 03:26:52,653 | INFO     | current chi2=10.899843828733154 (change=25.755294807493854 %)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,655 | INFO     | sum of square deviations: 661061282783.386
[2025-11-22 22:27:50] 2025-11-23 03:26:52,748 | INFO     | sum of deviations: 3196665236603.538
[2025-11-22 22:27:50] 2025-11-23 03:26:52,749 | INFO     | mean x: 1763829141.5897436
[2025-11-22 22:27:50] 2025-11-23 03:26:52,749 | INFO     | mean y: 3157265.6923076925
[2025-11-22 22:27:50] 2025-11-23 03:26:52,749 | INFO     | intersect: -8526114447.949637
[2025-11-22 22:27:50] 2025-11-23 03:26:52,751 | INFO     | chi2: 10.288752495043555
[2025-11-22 22:27:50] 2025-11-23 03:26:52,752 | INFO     | current chi2=10.288752495043555 (change=5.6064228377171474 %)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,752 | INFO     | left removable region: 20
[2025-11-22 22:27:50] 2025-11-23 03:26:52,758 | INFO     | sum of square deviations: 636713393561.997
[2025-11-22 22:27:50] 2025-11-23 03:26:52,846 | INFO     | sum of deviations: 3570253719878.046
[2025-11-22 22:27:50] 2025-11-23 03:26:52,846 | INFO     | mean x: 1763829263.6113296
[2025-11-22 22:27:50] 2025-11-23 03:26:52,846 | INFO     | mean y: 3171975.2470495673
[2025-11-22 22:27:50] 2025-11-23 03:26:52,846 | INFO     | intersect: -9887177518.437557
[2025-11-22 22:27:50] 2025-11-23 03:26:52,848 | INFO     | chi2: 6.454093306805339
[2025-11-22 22:27:50] 2025-11-23 03:26:52,849 | INFO     | current memory leak: 5.61 B/s (using 1271 data points, chi2=6.45)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | could have reported an average CPU frequency of 2599 MHz (46 samples)
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | ..............................
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | . Timing measurements:
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | . get job = 0 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | . initial setup = 4 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | . payload setup = 18 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,855 | INFO     | . stage-in = 0 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,856 | INFO     | . payload execution = 79085 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,856 | INFO     | . stage-out = 9 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,856 | INFO     | . log creation = 2 s
[2025-11-22 22:27:50] 2025-11-23 03:26:52,856 | INFO     | ..............................
[2025-11-22 22:27:50] 2025-11-23 03:26:53,093 | INFO     | 
[2025-11-22 22:27:50] 2025-11-23 03:26:53,093 | INFO     | job summary report
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | --------------------------------------------------
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | PanDA job id: 6894288751
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | task id: 47533967
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | errors: (none)
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | pilot state: finished 
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | transexitcode: 0
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | exeerrorcode: 0
[2025-11-22 22:27:50] 2025-11-23 03:26:53,094 | INFO     | exeerrordiag: 
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | exitcode: 0
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | exitmsg: OK
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | cpuconsumptiontime: 309123 s
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | nevents: 1000
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | neventsw: 0
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | pid: 1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | pgrp: 1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | corecount: 9
[2025-11-22 22:27:50] 2025-11-23 03:26:53,095 | INFO     | event service: False
[2025-11-22 22:27:50] 2025-11-23 03:26:53,096 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 14: 2299125, 23: 2299153, 79108: 2362007, 79118: 2371001, 79119: 2371057, 79141: 2371303}
[2025-11-22 22:27:50] 2025-11-23 03:26:53,096 | INFO     | --------------------------------------------------
[2025-11-22 22:27:50] 2025-11-23 03:26:53,096 | INFO     | 
[2025-11-22 22:27:50] 2025-11-23 03:26:53,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 22:27:50] 2025-11-23 03:26:53,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,159 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,159 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:27:50] 2025-11-23 03:26:53,162 | INFO     | job 6894288751 has completed (purged errors)
[2025-11-22 22:27:50] 2025-11-23 03:26:53,162 | INFO     | overall cleanup function is called
[2025-11-22 22:27:50] 2025-11-23 03:26:54,198 | INFO     | --- collectZombieJob: --- 10, [1276275]
[2025-11-22 22:27:50] 2025-11-23 03:26:54,199 | INFO     | zombie collector waiting for pid 1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:54,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:27:50] 2025-11-23 03:26:54,200 | INFO     | collected zombie processes
[2025-11-22 22:27:50] 2025-11-23 03:26:54,200 | INFO     | will attempt to kill all subprocesses of pid=1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:54,792 | INFO     | process IDs to be killed: [1276275] (in reverse order)
[2025-11-22 22:27:50] 2025-11-23 03:26:54,876 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:27:50] 2025-11-23 03:26:54,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:27:50] 2025-11-23 03:26:54,912 | INFO     | did not find any defunct processes belonging to 1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:54,935 | INFO     | did not find any defunct processes belonging to 1276275
[2025-11-22 22:27:50] 2025-11-23 03:26:54,937 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:27:50] 2025-11-23 03:26:54,937 | INFO     | ready for new job
[2025-11-22 22:27:50] 2025-11-23 03:26:54,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:27:50] 2025-11-23 03:26:54,953 | INFO     | ***************************************
[2025-11-22 22:27:50] 2025-11-23 03:26:54,953 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:27:50] 2025-11-23 03:26:54,953 | INFO     | ***************************************
[2025-11-22 22:27:50] 2025-11-23 03:26:54,954 | INFO     | 
[2025-11-22 22:27:50] 2025-11-23 03:26:54,956 | INFO     | architecture information:
[2025-11-22 22:27:50] 2025-11-23 03:26:54,960 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:27:50] 2025-11-23 03:26:55,130 | INFO     | cat /etc/os-release:
[2025-11-22 22:27:50] NAME="CentOS Linux"
[2025-11-22 22:27:50] VERSION="7 (Core)"
[2025-11-22 22:27:50] ID="centos"
[2025-11-22 22:27:50] ID_LIKE="rhel fedora"
[2025-11-22 22:27:50] VERSION_ID="7"
[2025-11-22 22:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:27:50] ANSI_COLOR="0;31"
[2025-11-22 22:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:27:50] HOME_URL="https://www.centos.org/"
[2025-11-22 22:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:27:50] 
[2025-11-22 22:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:27:50] 
[2025-11-22 22:27:50] 2025-11-23 03:26:55,130 | INFO     | ***************************************
[2025-11-22 22:27:50] 2025-11-23 03:26:55,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 22:27:50] 2025-11-23 03:26:55,775 | INFO     | sufficient remaining disk space (50989105152 B)
[2025-11-22 22:27:50] 2025-11-23 03:26:55,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:27:50] 2025-11-23 03:26:55,775 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:27:50] 2025-11-23 03:26:55,776 | INFO     | update_server=False
[2025-11-22 22:27:50] 2025-11-23 03:26:55,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:27:50] 2025-11-23 03:26:55,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:27:50] 2025-11-23 03:26:55,776 | INFO     | aborting loop
[2025-11-22 22:27:50] 2025-11-23 03:26:55,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:27:50] 2025-11-23 03:26:56,031 | INFO     | all job control threads have been joined
[2025-11-22 22:27:50] 2025-11-23 03:26:56,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:27:50] 2025-11-23 03:26:56,758 | INFO     | all data control threads have been joined
[2025-11-22 22:27:50] 2025-11-23 03:26:56,781 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:56,789 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:56,802 | INFO     | all payload control threads have been joined
[2025-11-22 22:27:50] 2025-11-23 03:26:56,859 | INFO     | [job] validate thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:56,969 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,037 | INFO     | [job] control thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,090 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,101 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,399 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,764 | INFO     | [data] control thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:57,808 | INFO     | [payload] control thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:58,104 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:58,105 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:58,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:58,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:27:50] 2025-11-23 03:26:58,336 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:59,120 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:26:59,827 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:27:50] 2025-11-23 03:27:24,016 [wrapper] supervise_pilot (15 min periods counter: 89)
[2025-11-22 22:27:50] 2025-11-23 03:27:26,211 | INFO     | PID=1269541 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 22:27:50] 2025-11-23 03:27:26,243 | INFO     | .. there are 7 such processes running
[2025-11-22 22:27:50] 2025-11-23 03:27:26,244 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:27:50] 2025-11-23 03:27:26,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:27:50] 2025-11-23 03:27:26,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:27:50] 2025-11-23 03:27:41,727 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:27:50] 2025-11-23 03:27:42,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758885631808)>', '<ExcThread(monitor, started 139758160307968)>']
[2025-11-22 22:27:50] 2025-11-23 03:27:43,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:27:50] 2025-11-23 03:27:43,373 | INFO     | [monitor] control thread has ended
[2025-11-22 22:27:50] 2025-11-23 03:27:47,736 | INFO     | all workflow threads have been joined
[2025-11-22 22:27:50] 2025-11-23 03:27:47,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:27:50] 2025-11-23 03:27:47,737 | INFO     | traces error code: 0
[2025-11-22 22:27:50] 2025-11-23 03:27:47,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:27:50] 2025-11-23 03:27:48,970 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:27:50] 2025-11-23 03:27:49,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:27:50] 2025-11-23 03:27:49,024 [wrapper] pilotpid: 1269541
[2025-11-22 22:27:50] 2025-11-23 03:27:49,061 [wrapper] Pilot exit status: 0
[2025-11-22 22:27:50] 2025-11-23 03:27:49,348 [wrapper] pandaids: 6894288751
[2025-11-22 22:27:50] 2025-11-23 03:27:49,594 [wrapper] cleanup supervisor_pilot 3029266 1269542
[2025-11-22 22:27:50] 2025-11-23 03:27:49,606 [wrapper] Test setup, not cleaning
[2025-11-22 22:27:50] 2025-11-23 03:27:49,623 [wrapper] apfmon messages muted
[2025-11-22 22:27:50] 2025-11-23 03:27:49,645 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:27:50] 2025-11-23 03:27:49,660 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:27:50]  *** Error codes and diagnostics ***
[2025-11-22 22:27:50]     "exeErrorCode": 0,
[2025-11-22 22:27:50]     "exeErrorDiag": "",
[2025-11-22 22:27:50]     "pilotErrorCode": 0,
[2025-11-22 22:27:50]     "pilotErrorDiag": "",
[2025-11-22 22:27:50]  *** Listing of results directory ***
[2025-11-22 22:27:50] total 1320668
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-22 22:27:50] -rwx------. 1 boincer umatlas     36292 Nov 21 06:12 runpilot2-wrapper.sh
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:12 queuedata.json
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas       100 Nov 22 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:27:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 00:26 run_atlas
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas       105 Nov 22 00:26 job.xml
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas 409366291 Nov 22 00:26 EVNT.47493127._002394.pool.root.1
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:26 start_atlas.sh
[2025-11-22 22:27:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 00:26 shared
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 00:26 input.tar.gz
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas         0 Nov 22 00:26 boinc_lockfile
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 00:26 pandaJob.out
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas        57 Nov 22 00:26 setup.sh.local
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas    989752 Nov 22 00:27 agis_schedconf.cvmfs.json
[2025-11-22 22:27:50] drwx------. 5 boincer umatlas      4096 Nov 22 00:27 pilot3
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas       533 Nov 22 22:06 boinc_task_state.xml
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas      6662 Nov 22 22:18 init_data.xml
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas 913568365 Nov 22 22:25 HITS.47533967._003660.pool.root.1
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas      1055 Nov 22 22:26 memory_monitor_summary.json
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas   1526164 Nov 22 22:26 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas   2497531 Nov 22 22:26 log.47533967._003660.job.log.tgz.1
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas        95 Nov 22 22:26 pilot_heartbeat.json
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas      8619 Nov 22 22:26 heartbeat.json
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 22:27 boinc_mmap_file
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas        29 Nov 22 22:27 wrapper_checkpoint.txt
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas      4823 Nov 22 22:27 pilotlog.txt
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas  10254959 Nov 22 22:27 log.47533967._003660.job.log.1
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas       353 Nov 22 22:27 output.list
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas       620 Nov 22 22:27 runtime_log
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas  12769280 Nov 22 22:27 result.tar.gz
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas      9343 Nov 22 22:27 runtime_log.err
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas       660 Nov 22 22:27 0FbLDmuEeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLKJKDmzjFMMn.diag
[2025-11-22 22:27:50] -rw-r--r--. 1 boincer umatlas     21626 Nov 22 22:27 stderr.txt
[2025-11-22 22:27:50] HITS file was successfully produced:
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas 913568365 Nov 22 22:25 shared/HITS.pool.root.1
[2025-11-22 22:27:50]  *** Contents of shared directory: ***
[2025-11-22 22:27:50] total 1305008
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas 409366291 Nov 22 00:26 ATLAS.root_0
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:26 start_atlas.sh
[2025-11-22 22:27:50] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 00:26 input.tar.gz
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas 913568365 Nov 22 22:25 HITS.pool.root.1
[2025-11-22 22:27:50] -rw-------. 1 boincer umatlas  12769280 Nov 22 22:27 result.tar.gz
22:27:52 (1265296): run_atlas exited; CPU time 310178.632677
22:27:52 (1265296): called boinc_finish(0)

</stderr_txt>
]]>

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