Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:50 (3126384): wrapper (7.7.26015): starting
18:24:50 (3126384): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 18:24:50] Arguments: --nthreads 9
[2025-11-22 18:24:50] Threads: 9
[2025-11-22 18:24:50] Checking for CVMFS
[2025-11-22 18:24:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:24:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:24:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:24:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:24:52] 2.13.3.0 11066 24948 327108 153190 3 122 28503837 32935937 16906 16776704 0 69885043 99.438 96634153 38233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 18:24:52] CVMFS is ok
[2025-11-22 18:24:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:24:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:24:52] Further information can be found at the LHC@home message board.
[2025-11-22 18:24:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:24:52] Checking for apptainer binary...
[2025-11-22 18:24:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:24:52] Running /usr/bin/apptainer --version
[2025-11-22 18:24:53] apptainer version 1.4.4-1.el9
[2025-11-22 18:24:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:24:53] c6-1-24-4.aglt2.org
[2025-11-22 18:24:53] apptainer works
[2025-11-22 18:24:53] Set ATHENA_PROC_NUMBER=9
[2025-11-22 18:24:53] Set ATHENA_CORE_NUMBER=9
[2025-11-22 18:24:53] Starting ATLAS job with PandaID=6895329091
[2025-11-22 18:24:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:44:10]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:44:10] 2025-11-24 16:43:20,274 | INFO     | time since job start (148647s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:21,847 | INFO     | monitor loop #8103: job 0:6895329091 is in state 'finished'
[2025-11-24 11:44:10] 2025-11-24 16:43:21,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:44:10] 2025-11-24 16:43:22,292 | INFO     | time since job start (148649s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:24,302 | INFO     | time since job start (148651s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:24,356 | INFO     | monitor loop #8104: job 0:6895329091 is in state 'finished'
[2025-11-24 11:44:10] 2025-11-24 16:43:24,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:44:10] 2025-11-24 16:43:26,310 | INFO     | time since job start (148653s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:26,895 | INFO     | monitor loop #8105: job 0:6895329091 is in state 'finished'
[2025-11-24 11:44:10] 2025-11-24 16:43:26,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:44:10] 2025-11-24 16:43:28,318 | INFO     | time since job start (148655s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:29,411 | INFO     | monitor loop #8106: job 0:6895329091 is in state 'finished'
[2025-11-24 11:44:10] 2025-11-24 16:43:29,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:44:10] 2025-11-24 16:43:30,325 | INFO     | time since job start (148657s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:31,438 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 11:44:10] 2025-11-24 16:43:31,442 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2766.1928750000006
[2025-11-24 11:44:10] 2025-11-24 16:43:31,464 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895329091/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:44:10] 2025-11-24 16:43:31,464 | INFO     | extracted standard info from prmon json
[2025-11-24 11:44:10] 2025-11-24 16:43:31,465 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:44:10] 2025-11-24 16:43:31,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:44:10] 2025-11-24 16:43:31,539 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:44:10] 2025-11-24 16:43:31,546 | INFO     | sum of square deviations: 4476519451810.567
[2025-11-24 11:44:10] 2025-11-24 16:43:31,770 | INFO     | sum of deviations: 8688178231422.866
[2025-11-24 11:44:10] 2025-11-24 16:43:31,774 | INFO     | mean x: 1763928319.5954826
[2025-11-24 11:44:10] 2025-11-24 16:43:31,775 | INFO     | mean y: 3130477.7876796713
[2025-11-24 11:44:10] 2025-11-24 16:43:31,775 | INFO     | intersect: -3420360426.9377155
[2025-11-24 11:44:10] 2025-11-24 16:43:31,777 | INFO     | chi2: 18.086568113670232
[2025-11-24 11:44:10] 2025-11-24 16:43:31,784 | INFO     | sum of square deviations: 4449001445923.824
[2025-11-24 11:44:10] 2025-11-24 16:43:32,037 | INFO     | sum of deviations: 9618440046220.363
[2025-11-24 11:44:10] 2025-11-24 16:43:32,038 | INFO     | mean x: 1763928167.1057613
[2025-11-24 11:44:10] 2025-11-24 16:43:32,038 | INFO     | mean y: 3135632.1308641974
[2025-11-24 11:44:10] 2025-11-24 16:43:32,038 | INFO     | intersect: -3810357693.8132324
[2025-11-24 11:44:10] 2025-11-24 16:43:32,041 | INFO     | chi2: 14.593289987521905
[2025-11-24 11:44:10] 2025-11-24 16:43:32,041 | INFO     | current chi2=14.593289987521905 (change=19.314212094819855 %)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,041 | INFO     | right removable region: 2429
[2025-11-24 11:44:10] 2025-11-24 16:43:32,050 | INFO     | monitor loop #8107: job 0:6895329091 is in state 'finished'
[2025-11-24 11:44:10] 2025-11-24 16:43:32,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,052 | INFO     | sum of square deviations: 4448993728673.392
[2025-11-24 11:44:10] 2025-11-24 16:43:32,338 | INFO     | sum of deviations: 7856362318764.365
[2025-11-24 11:44:10] 2025-11-24 16:43:32,338 | INFO     | mean x: 1763928472.1065843
[2025-11-24 11:44:10] 2025-11-24 16:43:32,338 | INFO     | mean y: 3135085.41563786
[2025-11-24 11:44:10] 2025-11-24 16:43:32,338 | INFO     | intersect: -3111740328.307633
[2025-11-24 11:44:10] 2025-11-24 16:43:32,345 | INFO     | chi2: 15.532184178207462
[2025-11-24 11:44:10] 2025-11-24 16:43:32,346 | INFO     | current chi2=15.532184178207462 (change=14.123099083303202 %)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,346 | INFO     | left removable region: 10
[2025-11-24 11:44:10] 2025-11-24 16:43:32,349 | INFO     | sum of square deviations: 4388848146224.5947
[2025-11-24 11:44:10] 2025-11-24 16:43:32,356 | INFO     | time since job start (148659s) is within the limit (172800.0s)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,661 | INFO     | sum of deviations: 8738493591449.7
[2025-11-24 11:44:10] 2025-11-24 16:43:32,665 | INFO     | mean x: 1763928441.6188507
[2025-11-24 11:44:10] 2025-11-24 16:43:32,666 | INFO     | mean y: 3142385.164530798
[2025-11-24 11:44:10] 2025-11-24 16:43:32,666 | INFO     | intersect: -3508958482.6045647
[2025-11-24 11:44:10] 2025-11-24 16:43:32,673 | INFO     | chi2: 11.377312753630004
[2025-11-24 11:44:10] 2025-11-24 16:43:32,674 | INFO     | current memory leak: 1.99 B/s (using 2419 data points, chi2=11.38)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,677 | INFO     | could have reported an average CPU frequency of 2870 MHz (84 samples)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,681 | INFO     | ..............................
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . Timing measurements:
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . get job = 0 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . initial setup = 7 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . payload setup = 38 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . stage-in = 0 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . payload execution = 148506 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . stage-out = 11 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | . log creation = 2 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,682 | INFO     | ..............................
[2025-11-24 11:44:10] 2025-11-24 16:43:32,943 | INFO     | 
[2025-11-24 11:44:10] 2025-11-24 16:43:32,943 | INFO     | job summary report
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | --------------------------------------------------
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | PanDA job id: 6895329091
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | task id: 47556137
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | errors: (none)
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | pilot state: finished 
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | transexitcode: 0
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | exeerrorcode: 0
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | exeerrordiag: 
[2025-11-24 11:44:10] 2025-11-24 16:43:32,944 | INFO     | exitcode: 0
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | exitmsg: OK
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | cpuconsumptiontime: 245529 s
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | nevents: 1000
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | neventsw: 0
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | pid: 3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | pgrp: 3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | corecount: 9
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | event service: False
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | sizes: {0: 2298635, 1: 2298834, 2: 2298834, 13: 2298862, 23: 2299120, 24: 2299208, 34: 2299364, 148546: 2390303, 148547: 2390302, 148558: 2400143, 148561: 2400199,
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | --------------------------------------------------
[2025-11-24 11:44:10] 2025-11-24 16:43:32,945 | INFO     | 
[2025-11-24 11:44:10] 2025-11-24 16:43:32,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:44:10] 2025-11-24 16:43:33,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:44:10] 2025-11-24 16:43:33,034 | INFO     | job 6895329091 has completed (purged errors)
[2025-11-24 11:44:10] 2025-11-24 16:43:33,034 | INFO     | overall cleanup function is called
[2025-11-24 11:44:10] 2025-11-24 16:43:34,092 | INFO     | --- collectZombieJob: --- 10, [3138741]
[2025-11-24 11:44:10] 2025-11-24 16:43:34,092 | INFO     | zombie collector waiting for pid 3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:34,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:44:10] 2025-11-24 16:43:34,093 | INFO     | collected zombie processes
[2025-11-24 11:44:10] 2025-11-24 16:43:34,093 | INFO     | will attempt to kill all subprocesses of pid=3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:35,126 | INFO     | process IDs to be killed: [3138741] (in reverse order)
[2025-11-24 11:44:10] 2025-11-24 16:43:35,458 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:44:10] 2025-11-24 16:43:35,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:44:10] 2025-11-24 16:43:35,489 | INFO     | did not find any defunct processes belonging to 3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:35,520 | INFO     | did not find any defunct processes belonging to 3138741
[2025-11-24 11:44:10] 2025-11-24 16:43:35,528 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:44:10] 2025-11-24 16:43:35,529 | INFO     | ready for new job
[2025-11-24 11:44:10] 2025-11-24 16:43:35,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:44:10] 2025-11-24 16:43:35,540 | INFO     | ***************************************
[2025-11-24 11:44:10] 2025-11-24 16:43:35,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:44:10] 2025-11-24 16:43:35,544 | INFO     | ***************************************
[2025-11-24 11:44:10] 2025-11-24 16:43:35,545 | INFO     | 
[2025-11-24 11:44:10] 2025-11-24 16:43:35,547 | INFO     | architecture information:
[2025-11-24 11:44:10] 2025-11-24 16:43:35,551 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:44:10] 2025-11-24 16:43:35,727 | INFO     | cat /etc/os-release:
[2025-11-24 11:44:10] NAME="CentOS Linux"
[2025-11-24 11:44:10] VERSION="7 (Core)"
[2025-11-24 11:44:10] ID="centos"
[2025-11-24 11:44:10] ID_LIKE="rhel fedora"
[2025-11-24 11:44:10] VERSION_ID="7"
[2025-11-24 11:44:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:44:10] ANSI_COLOR="0;31"
[2025-11-24 11:44:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:44:10] HOME_URL="https://www.centos.org/"
[2025-11-24 11:44:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:44:10] 
[2025-11-24 11:44:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:44:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:44:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:44:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:44:10] 
[2025-11-24 11:44:10] 2025-11-24 16:43:35,727 | INFO     | ***************************************
[2025-11-24 11:44:10] 2025-11-24 16:43:36,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 11:44:10] 2025-11-24 16:43:36,336 | INFO     | sufficient remaining disk space (67389882368 B)
[2025-11-24 11:44:10] 2025-11-24 16:43:36,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:44:10] 2025-11-24 16:43:36,336 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:44:10] 2025-11-24 16:43:36,336 | INFO     | update_server=False
[2025-11-24 11:44:10] 2025-11-24 16:43:36,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:44:10] 2025-11-24 16:43:36,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:44:10] 2025-11-24 16:43:36,337 | INFO     | aborting loop
[2025-11-24 11:44:10] 2025-11-24 16:43:36,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:44:10] 2025-11-24 16:43:36,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:44:10] 2025-11-24 16:43:36,500 | INFO     | all payload control threads have been joined
[2025-11-24 11:44:10] 2025-11-24 16:43:36,792 | INFO     | all data control threads have been joined
[2025-11-24 11:44:10] 2025-11-24 16:43:37,343 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,344 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,475 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,506 | INFO     | [payload] control thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,570 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,611 | INFO     | all job control threads have been joined
[2025-11-24 11:44:10] 2025-11-24 16:43:37,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,798 | INFO     | [data] control thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:37,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:44:10] 2025-11-24 16:43:38,330 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:44:10] 2025-11-24 16:43:38,344 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:38,446 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:38,571 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:38,572 | INFO     | [job] validate thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:38,572 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:38,617 | INFO     | [job] control thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:39,004 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:40,384 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:44:10] 2025-11-24 16:43:42,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387911948096)>', '<ExcThread(monitor, started 140387549165312)>']
[2025-11-24 11:44:10] 2025-11-24 16:43:47,059 | INFO     | all workflow threads have been joined
[2025-11-24 11:44:10] 2025-11-24 16:43:47,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:44:10] 2025-11-24 16:43:47,061 | INFO     | traces error code: 0
[2025-11-24 11:44:10] 2025-11-24 16:43:47,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:44:10] 2025-11-24 16:44:09,114 | INFO     | PID=3130944 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 11:44:10] 2025-11-24 16:44:09,125 | INFO     | .. there are 27 such processes running
[2025-11-24 11:44:10] 2025-11-24 16:44:09,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:44:10] 2025-11-24 16:44:09,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:44:10] 2025-11-24 16:44:09,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:44:10] 2025-11-24 16:44:09,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:44:10] 2025-11-24 16:44:09,127 | INFO     | [monitor] control thread has ended
[2025-11-24 11:44:10] 2025-11-24 16:44:09,391 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:44:10] 2025-11-24 16:44:09,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:44:10] 2025-11-24 16:44:09,439 [wrapper] pilotpid: 3130944
[2025-11-24 11:44:10] 2025-11-24 16:44:09,455 [wrapper] Pilot exit status: 0
[2025-11-24 11:44:10] 2025-11-24 16:44:09,565 [wrapper] pandaids: 6895329091
[2025-11-24 11:44:10] 2025-11-24 16:44:09,851 [wrapper] cleanup supervisor_pilot 1742609 3130945
[2025-11-24 11:44:10] 2025-11-24 16:44:09,866 [wrapper] Test setup, not cleaning
[2025-11-24 11:44:10] 2025-11-24 16:44:09,942 [wrapper] apfmon messages muted
[2025-11-24 11:44:10] 2025-11-24 16:44:09,962 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:44:10] 2025-11-24 16:44:09,998 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:44:10]  *** Error codes and diagnostics ***
[2025-11-24 11:44:10]     "exeErrorCode": 0,
[2025-11-24 11:44:10]     "exeErrorDiag": "",
[2025-11-24 11:44:10]     "pilotErrorCode": 0,
[2025-11-24 11:44:10]     "pilotErrorDiag": "",
[2025-11-24 11:44:10]  *** Listing of results directory ***
[2025-11-24 11:44:10] total 1347432
[2025-11-24 11:44:10] -rwx------. 1 boincer umatlas     36292 Nov 21 13:42 runpilot2-wrapper.sh
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 13:42 queuedata.json
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 13:42 pilot3.tar.gz
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas       100 Nov 22 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:44:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 18:24 run_atlas
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas       105 Nov 22 18:24 job.xml
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas 412187756 Nov 22 18:24 EVNT.47483658._000105.pool.root.1
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:24 start_atlas.sh
[2025-11-24 11:44:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 18:24 shared
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas    590089 Nov 22 18:24 input.tar.gz
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas         0 Nov 22 18:24 boinc_lockfile
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 18:24 pandaJob.out
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas        57 Nov 22 18:24 setup.sh.local
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas    989784 Nov 22 18:25 agis_schedconf.cvmfs.json
[2025-11-24 11:44:10] drwx------. 5 boincer umatlas      4096 Nov 22 18:25 pilot3
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas       534 Nov 24 10:58 boinc_task_state.xml
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas      6847 Nov 24 11:39 init_data.xml
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas 922099252 Nov 24 11:41 HITS.47556137._001050.pool.root.1
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas      1059 Nov 24 11:42 memory_monitor_summary.json
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas   1516227 Nov 24 11:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas   3184759 Nov 24 11:42 log.47556137._001050.job.log.tgz.1
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas      8623 Nov 24 11:43 heartbeat.json
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 11:44 boinc_mmap_file
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas        30 Nov 24 11:44 wrapper_checkpoint.txt
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas        95 Nov 24 11:44 pilot_heartbeat.json
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas       823 Nov 24 11:44 pilotlog.txt
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas  17598684 Nov 24 11:44 log.47556137._001050.job.log.1
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas       353 Nov 24 11:44 output.list
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas       620 Nov 24 11:44 runtime_log
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas  20807680 Nov 24 11:44 result.tar.gz
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas      9349 Nov 24 11:44 runtime_log.err
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas       665 Nov 24 11:44 OBrKDm3Glg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmndJKDmaip9rm.diag
[2025-11-24 11:44:10] -rw-r--r--. 1 boincer umatlas     21829 Nov 24 11:44 stderr.txt
[2025-11-24 11:44:10] HITS file was successfully produced:
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas 922099252 Nov 24 11:41 shared/HITS.pool.root.1
[2025-11-24 11:44:10]  *** Contents of shared directory: ***
[2025-11-24 11:44:10] total 1323940
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas 412187756 Nov 22 18:24 ATLAS.root_0
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:24 start_atlas.sh
[2025-11-24 11:44:10] -rw-r--r--. 2 boincer umatlas    590089 Nov 22 18:24 input.tar.gz
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas 922099252 Nov 24 11:41 HITS.pool.root.1
[2025-11-24 11:44:10] -rw-------. 1 boincer umatlas  20807680 Nov 24 11:44 result.tar.gz
11:44:12 (3126384): run_atlas exited; CPU time 248508.790542
11:44:12 (3126384): called boinc_finish(0)

</stderr_txt>
]]>

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