Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:51 (17719): wrapper (7.7.26015): starting
00:04:51 (17719): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 00:04:51] Arguments: --nthreads 8
[2025-11-22 00:04:51] Threads: 8
[2025-11-22 00:04:51] Checking for CVMFS
[2025-11-22 00:04:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:04:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:04:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:04:52] 2.13.2.0 3557600 16644 197832 153159 3 625 40726442 40960000 43880 16776704 0 169848370 99.718 122694997 47816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:04:52] CVMFS is ok
[2025-11-22 00:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:04:53] Further information can be found at the LHC@home message board.
[2025-11-22 00:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:04:53] Checking for apptainer binary...
[2025-11-22 00:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:04:53] Running /usr/bin/apptainer --version
[2025-11-22 00:04:53] apptainer version 1.4.4-1.el9
[2025-11-22 00:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:04:53] c-208-40.aglt2.org
[2025-11-22 00:04:53] apptainer works
[2025-11-22 00:04:53] Set ATHENA_PROC_NUMBER=8
[2025-11-22 00:04:53] Set ATHENA_CORE_NUMBER=8
[2025-11-22 00:04:53] Starting ATLAS job with PandaID=6893884415
[2025-11-22 00:04:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 17:53:33]  *** The last 200 lines of the pilot log: ***
[2025-11-22 17:53:33] 2025-11-22 22:52:45,542 | INFO     | monitor loop #3545: job 0:6893884415 is in state 'finished'
[2025-11-22 17:53:33] 2025-11-22 22:52:45,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:53:33] 2025-11-22 22:52:45,787 | INFO     | time since job start (63986s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:45,787 | INFO     | 63992s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 17:53:33] 2025-11-22 22:52:47,794 | INFO     | time since job start (63988s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:48,050 | INFO     | monitor loop #3546: job 0:6893884415 is in state 'finished'
[2025-11-22 17:53:33] 2025-11-22 22:52:48,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:53:33] 2025-11-22 22:52:49,814 | INFO     | time since job start (63990s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:50,556 | INFO     | monitor loop #3547: job 0:6893884415 is in state 'finished'
[2025-11-22 17:53:33] 2025-11-22 22:52:50,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:53:33] 2025-11-22 22:52:51,821 | INFO     | time since job start (63992s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:53,087 | INFO     | monitor loop #3548: job 0:6893884415 is in state 'finished'
[2025-11-22 17:53:33] 2025-11-22 22:52:53,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:53:33] 2025-11-22 22:52:53,844 | INFO     | time since job start (63994s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:55,592 | INFO     | monitor loop #3549: job 0:6893884415 is in state 'finished'
[2025-11-22 17:53:33] 2025-11-22 22:52:55,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:53:33] 2025-11-22 22:52:55,865 | INFO     | time since job start (63996s) is within the limit (172800.0s)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,616 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 17:53:33] 2025-11-22 22:52:56,637 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.6707734375
[2025-11-22 17:53:33] 2025-11-22 22:52:56,688 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6893884415/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,689 | INFO     | extracted standard info from prmon json
[2025-11-22 17:53:33] 2025-11-22 22:52:56,689 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 17:53:33] 2025-11-22 22:52:56,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 17:53:33] 2025-11-22 22:52:56,705 | INFO     | fitting pss+swap vs Time
[2025-11-22 17:53:33] 2025-11-22 22:52:56,706 | INFO     | sum of square deviations: 353825261377.41986
[2025-11-22 17:53:33] 2025-11-22 22:52:56,735 | INFO     | sum of deviations: 7004440913587.685
[2025-11-22 17:53:33] 2025-11-22 22:52:56,735 | INFO     | mean x: 1763820033.0851674
[2025-11-22 17:53:33] 2025-11-22 22:52:56,735 | INFO     | mean y: 3016999.857416268
[2025-11-22 17:53:33] 2025-11-22 22:52:56,735 | INFO     | intersect: -34914142831.66999
[2025-11-22 17:53:33] 2025-11-22 22:52:56,736 | INFO     | chi2: 31.82141401186489
[2025-11-22 17:53:33] 2025-11-22 22:52:56,736 | INFO     | sum of square deviations: 348771228939.6
[2025-11-22 17:53:33] 2025-11-22 22:52:56,761 | INFO     | sum of deviations: 7383820912386.391
[2025-11-22 17:53:33] 2025-11-22 22:52:56,761 | INFO     | mean x: 1763819880.6
[2025-11-22 17:53:33] 2025-11-22 22:52:56,761 | INFO     | mean y: 3028444.025
[2025-11-22 17:53:33] 2025-11-22 22:52:56,761 | INFO     | intersect: -37338727524.93593
[2025-11-22 17:53:33] 2025-11-22 22:52:56,762 | INFO     | chi2: 28.004812653308395
[2025-11-22 17:53:33] 2025-11-22 22:52:56,762 | INFO     | current chi2=28.004812653308395 (change=11.993814470763118 %)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,762 | INFO     | right removable region: 1039
[2025-11-22 17:53:33] 2025-11-22 22:52:56,763 | INFO     | sum of square deviations: 348769389309.9956
[2025-11-22 17:53:33] 2025-11-22 22:52:56,791 | INFO     | sum of deviations: 6555993500043.461
[2025-11-22 17:53:33] 2025-11-22 22:52:56,791 | INFO     | mean x: 1763820185.5980768
[2025-11-22 17:53:33] 2025-11-22 22:52:56,792 | INFO     | mean y: 3030525.0346153844
[2025-11-22 17:53:33] 2025-11-22 22:52:56,792 | INFO     | intersect: -33152383987.98737
[2025-11-22 17:53:33] 2025-11-22 22:52:56,792 | INFO     | chi2: 27.57112937159534
[2025-11-22 17:53:33] 2025-11-22 22:52:56,792 | INFO     | current chi2=27.57112937159534 (change=13.35668062608655 %)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,792 | INFO     | left removable region: 10
[2025-11-22 17:53:33] 2025-11-22 22:52:56,793 | INFO     | sum of square deviations: 337818496695.2885
[2025-11-22 17:53:33] 2025-11-22 22:52:56,817 | INFO     | sum of deviations: 6603021201102.365
[2025-11-22 17:53:33] 2025-11-22 22:52:56,817 | INFO     | mean x: 1763820155.1311953
[2025-11-22 17:53:33] 2025-11-22 22:52:56,817 | INFO     | mean y: 3056779.5898931003
[2025-11-22 17:53:33] 2025-11-22 22:52:56,818 | INFO     | intersect: -34472680911.493675
[2025-11-22 17:53:33] 2025-11-22 22:52:56,818 | INFO     | chi2: 19.694151307419638
[2025-11-22 17:53:33] 2025-11-22 22:52:56,818 | INFO     | current memory leak: 19.55 B/s (using 1029 data points, chi2=19.69)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,823 | INFO     | could have reported an average CPU frequency of 3798 MHz (38 samples)
[2025-11-22 17:53:33] 2025-11-22 22:52:56,823 | INFO     | ..............................
[2025-11-22 17:53:33] 2025-11-22 22:52:56,823 | INFO     | . Timing measurements:
[2025-11-22 17:53:33] 2025-11-22 22:52:56,823 | INFO     | . get job = 0 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . initial setup = 5 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . payload setup = 64 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . stage-in = 0 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . payload execution = 63782 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . stage-out = 7 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | . log creation = 2 s
[2025-11-22 17:53:33] 2025-11-22 22:52:56,824 | INFO     | ..............................
[2025-11-22 17:53:33] 2025-11-22 22:52:57,335 | INFO     | 
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | job summary report
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | --------------------------------------------------
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | PanDA job id: 6893884415
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | task id: 47523449
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | errors: (none)
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | pilot state: finished 
[2025-11-22 17:53:33] 2025-11-22 22:52:57,338 | INFO     | transexitcode: 0
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | exeerrorcode: 0
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | exeerrordiag: 
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | exitcode: 0
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | exitmsg: OK
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | cpuconsumptiontime: 145713 s
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | nevents: 1000
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | neventsw: 0
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | pid: 100291
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | pgrp: 100291
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | corecount: 8
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | event service: False
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | sizes: {0: 2298581, 1: 2298836, 2: 2298836, 13: 2298864, 24: 2298920, 34: 2298948, 45: 2299104, 46: 2299394, 56: 2299422, 63852: 2352770, 63853: 2352769, 63860: 23
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | --------------------------------------------------
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | 
[2025-11-22 17:53:33] 2025-11-22 22:52:57,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | job 6893884415 has completed (purged errors)
[2025-11-22 17:53:33] 2025-11-22 22:52:57,393 | INFO     | overall cleanup function is called
[2025-11-22 17:53:33] 2025-11-22 22:52:58,418 | INFO     | --- collectZombieJob: --- 10, [100291]
[2025-11-22 17:53:33] 2025-11-22 22:52:58,418 | INFO     | zombie collector waiting for pid 100291
[2025-11-22 17:53:33] 2025-11-22 22:52:58,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 17:53:33] 2025-11-22 22:52:58,418 | INFO     | collected zombie processes
[2025-11-22 17:53:33] 2025-11-22 22:52:58,418 | INFO     | will attempt to kill all subprocesses of pid=100291
[2025-11-22 17:53:33] 2025-11-22 22:52:59,846 | INFO     | process IDs to be killed: [100291] (in reverse order)
[2025-11-22 17:53:33] 2025-11-22 22:53:00,796 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 17:53:33] 2025-11-22 22:53:00,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 17:53:33] 2025-11-22 22:53:01,013 | INFO     | did not find any defunct processes belonging to 100291
[2025-11-22 17:53:33] 2025-11-22 22:53:01,042 | INFO     | did not find any defunct processes belonging to 100291
[2025-11-22 17:53:33] 2025-11-22 22:53:01,043 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 17:53:33] 2025-11-22 22:53:01,043 | INFO     | ready for new job
[2025-11-22 17:53:33] 2025-11-22 22:53:01,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 17:53:33] 2025-11-22 22:53:01,046 | INFO     | ***************************************
[2025-11-22 17:53:33] 2025-11-22 22:53:01,046 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 17:53:33] 2025-11-22 22:53:01,046 | INFO     | ***************************************
[2025-11-22 17:53:33] 2025-11-22 22:53:01,046 | INFO     | 
[2025-11-22 17:53:33] 2025-11-22 22:53:01,051 | INFO     | architecture information:
[2025-11-22 17:53:33] 2025-11-22 22:53:01,052 | INFO     | executing command: cat /etc/os-release
[2025-11-22 17:53:33] 2025-11-22 22:53:01,122 | INFO     | cat /etc/os-release:
[2025-11-22 17:53:33] NAME="CentOS Linux"
[2025-11-22 17:53:33] VERSION="7 (Core)"
[2025-11-22 17:53:33] ID="centos"
[2025-11-22 17:53:33] ID_LIKE="rhel fedora"
[2025-11-22 17:53:33] VERSION_ID="7"
[2025-11-22 17:53:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 17:53:33] ANSI_COLOR="0;31"
[2025-11-22 17:53:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 17:53:33] HOME_URL="https://www.centos.org/"
[2025-11-22 17:53:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 17:53:33] 
[2025-11-22 17:53:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 17:53:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 17:53:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 17:53:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 17:53:33] 
[2025-11-22 17:53:33] 2025-11-22 22:53:01,122 | INFO     | ***************************************
[2025-11-22 17:53:33] 2025-11-22 22:53:01,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | INFO     | sufficient remaining disk space (166320930816 B)
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | INFO     | update_server=False
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 17:53:33] 2025-11-22 22:53:01,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:53:33] 2025-11-22 22:53:01,748 | INFO     | aborting loop
[2025-11-22 17:53:33] 2025-11-22 22:53:01,809 | INFO     | all job control threads have been joined
[2025-11-22 17:53:33] 2025-11-22 22:53:01,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 17:53:33] 2025-11-22 22:53:01,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:53:33] 2025-11-22 22:53:02,013 | INFO     | all data control threads have been joined
[2025-11-22 17:53:33] 2025-11-22 22:53:02,219 | INFO     | all payload control threads have been joined
[2025-11-22 17:53:33] 2025-11-22 22:53:02,753 | INFO     | [job] retrieve thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:02,757 | INFO     | [job] job monitor thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:02,761 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:02,765 | INFO     | [data] copytool_in thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:02,815 | INFO     | [job] control thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,004 | INFO     | [job] queue monitor thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,021 | INFO     | [data] control thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,225 | INFO     | [payload] control thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,487 | INFO     | [payload] validate_post thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,609 | INFO     | [payload] failed_post thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 17:53:33] 2025-11-22 22:53:03,870 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,870 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,870 | INFO     | [job] validate thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:03,974 | INFO     | [data] copytool_out thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:07,710 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 17:53:33] 2025-11-22 22:53:15,278 | INFO     | [monitor] cgroup control has ended
[2025-11-22 17:53:33] 2025-11-22 22:53:17,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697476917056)>', '<ExcThread(monitor, started 139697116387072)>']
[2025-11-22 17:53:33] 2025-11-22 22:53:22,128 | INFO     | all workflow threads have been joined
[2025-11-22 17:53:33] 2025-11-22 22:53:22,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 17:53:33] 2025-11-22 22:53:22,128 | INFO     | traces error code: 0
[2025-11-22 17:53:33] 2025-11-22 22:53:22,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 17:53:33] 2025-11-22 22:53:30,092 | INFO     | PID=37416 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 17:53:33] 2025-11-22 22:53:30,093 | INFO     | .. there are 34 such processes running
[2025-11-22 17:53:33] 2025-11-22 22:53:30,093 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 17:53:33] 2025-11-22 22:53:30,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 17:53:33] 2025-11-22 22:53:30,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 17:53:33] 2025-11-22 22:53:30,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 17:53:33] 2025-11-22 22:53:30,094 | INFO     | [monitor] control thread has ended
[2025-11-22 17:53:33] 2025-11-22 22:53:30,745 [wrapper] ==== pilot stdout END ====
[2025-11-22 17:53:33] 2025-11-22 22:53:30,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 17:53:33] 2025-11-22 22:53:30,806 [wrapper] pilotpid: 37416
[2025-11-22 17:53:33] 2025-11-22 22:53:30,836 [wrapper] Pilot exit status: 0
[2025-11-22 17:53:33] 2025-11-22 22:53:30,932 [wrapper] pandaids: 6893884415
[2025-11-22 17:53:33] 2025-11-22 22:53:31,233 [wrapper] cleanup supervisor_pilot  435091 37417
[2025-11-22 17:53:33] 2025-11-22 22:53:31,250 [wrapper] Test setup, not cleaning
[2025-11-22 17:53:33] 2025-11-22 22:53:31,275 [wrapper] apfmon messages muted
[2025-11-22 17:53:33] 2025-11-22 22:53:31,291 [wrapper] ==== wrapper stdout END ====
[2025-11-22 17:53:33] 2025-11-22 22:53:31,366 [wrapper] ==== wrapper stderr END ====
[2025-11-22 17:53:33]  *** Error codes and diagnostics ***
[2025-11-22 17:53:33]     "exeErrorCode": 0,
[2025-11-22 17:53:33]     "exeErrorDiag": "",
[2025-11-22 17:53:33]     "pilotErrorCode": 0,
[2025-11-22 17:53:33]     "pilotErrorDiag": "",
[2025-11-22 17:53:33]  *** Listing of results directory ***
[2025-11-22 17:53:33] total 1327700
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 16:12 pilot3.tar.gz
[2025-11-22 17:53:33] -rwx------. 1 boincer umatlas     36292 Nov 20 16:52 runpilot2-wrapper.sh
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 16:53 queuedata.json
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas       100 Nov 22 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 17:53:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 00:04 run_atlas
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas       105 Nov 22 00:04 job.xml
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas 408925293 Nov 22 00:04 EVNT.47493127._000931.pool.root.1
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:04 start_atlas.sh
[2025-11-22 17:53:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 00:04 shared
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas    590101 Nov 22 00:04 input.tar.gz
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas         0 Nov 22 00:04 boinc_lockfile
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 00:04 pandaJob.out
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      2075 Nov 22 00:04 stderr.txt
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas        57 Nov 22 00:04 setup.sh.local
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas    989752 Nov 22 00:06 agis_schedconf.cvmfs.json
[2025-11-22 17:53:33] drwx------. 5 boincer umatlas      4096 Nov 22 00:06 pilot3
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas       533 Nov 22 17:30 boinc_task_state.xml
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      7176 Nov 22 17:46 init_data.xml
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas 927077500 Nov 22 17:50 HITS.47523449._009305.pool.root.1
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas      1078 Nov 22 17:52 memory_monitor_summary.json
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas   1526164 Nov 22 17:52 agis_ddmendpoints.agis.ALL.json
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas   2145642 Nov 22 17:52 log.47523449._009305.job.log.tgz.1
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas      8644 Nov 22 17:52 heartbeat.json
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas       821 Nov 22 17:53 pilotlog.txt
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas        95 Nov 22 17:53 pilot_heartbeat.json
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas   7683667 Nov 22 17:53 log.47523449._009305.job.log.1
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas       353 Nov 22 17:53 output.list
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas       620 Nov 22 17:53 runtime_log
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas   9850880 Nov 22 17:53 result.tar.gz
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas       666 Nov 22 17:53 Z12KDmTlRg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8aIKDmZvCeHo.diag
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      9361 Nov 22 17:53 runtime_log.err
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas        29 Nov 22 17:53 wrapper_checkpoint.txt
[2025-11-22 17:53:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 17:53 boinc_mmap_file
[2025-11-22 17:53:33] HITS file was successfully produced:
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas 927077500 Nov 22 17:50 shared/HITS.pool.root.1
[2025-11-22 17:53:33]  *** Contents of shared directory: ***
[2025-11-22 17:53:33] total 1314920
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas 408925293 Nov 22 00:04 ATLAS.root_0
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:04 start_atlas.sh
[2025-11-22 17:53:33] -rw-r--r--. 2 boincer umatlas    590101 Nov 22 00:04 input.tar.gz
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas 927077500 Nov 22 17:50 HITS.pool.root.1
[2025-11-22 17:53:33] -rw-------. 1 boincer umatlas   9850880 Nov 22 17:53 result.tar.gz
17:53:34 (17719): run_atlas exited; CPU time 146647.422353
17:53:34 (17719): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN