Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:43 (4154457): wrapper (7.7.26015): starting
12:58:43 (4154457): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 12:58:43] Arguments: --nthreads 8
[2025-11-22 12:58:43] Threads: 8
[2025-11-22 12:58:43] Checking for CVMFS
[2025-11-22 12:58:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 12:58:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 12:58:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 12:58:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 12:58:44] 2.13.2.0 6320 30417 294688 153180 1 114 39814103 40960000 12144 16776704 0 28233806 99.661 22996068 37631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 12:58:44] CVMFS is ok
[2025-11-22 12:58:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 12:58:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 12:58:44] Further information can be found at the LHC@home message board.
[2025-11-22 12:58:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 12:58:44] Checking for apptainer binary...
[2025-11-22 12:58:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 12:58:44] Running /usr/bin/apptainer --version
[2025-11-22 12:58:44] apptainer version 1.4.4-1.el9
[2025-11-22 12:58:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 12:59:04] c-210-37-1.aglt2.org
[2025-11-22 12:59:04] apptainer works
[2025-11-22 12:59:04] Set ATHENA_PROC_NUMBER=8
[2025-11-22 12:59:04] Set ATHENA_CORE_NUMBER=8
[2025-11-22 12:59:04] Starting ATLAS job with PandaID=6893848594
[2025-11-22 12:59:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 05:53:17]  *** The last 200 lines of the pilot log: ***
[2025-11-23 05:53:17] 2025-11-23 10:52:29,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:31,287 | INFO     | time since job start (60790s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:31,826 | INFO     | monitor loop #3940: job 0:6893848594 is in state 'finished'
[2025-11-23 05:53:17] 2025-11-23 10:52:31,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:33,329 | INFO     | time since job start (60792s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:34,333 | INFO     | monitor loop #3941: job 0:6893848594 is in state 'finished'
[2025-11-23 05:53:17] 2025-11-23 10:52:34,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:35,338 | INFO     | time since job start (60794s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:36,847 | INFO     | monitor loop #3942: job 0:6893848594 is in state 'finished'
[2025-11-23 05:53:17] 2025-11-23 10:52:36,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:37,345 | INFO     | time since job start (60796s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:39,352 | INFO     | time since job start (60798s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:39,369 | INFO     | monitor loop #3943: job 0:6893848594 is in state 'finished'
[2025-11-23 05:53:17] 2025-11-23 10:52:39,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:41,358 | INFO     | time since job start (60800s) is within the limit (172800.0s)
[2025-11-23 05:53:17] 2025-11-23 10:52:41,542 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 05:53:17] 2025-11-23 10:52:41,566 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2892.0720892857157
[2025-11-23 05:53:17] 2025-11-23 10:52:41,648 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893848594/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 05:53:17] 2025-11-23 10:52:41,648 | INFO     | extracted standard info from prmon json
[2025-11-23 05:53:17] 2025-11-23 10:52:41,649 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 05:53:17] 2025-11-23 10:52:41,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 05:53:17] 2025-11-23 10:52:41,771 | INFO     | fitting pss+swap vs Time
[2025-11-23 05:53:17] 2025-11-23 10:52:41,773 | INFO     | sum of square deviations: 306483544294.2167
[2025-11-23 05:53:17] 2025-11-23 10:52:41,889 | INFO     | monitor loop #3944: job 0:6893848594 is in state 'finished'
[2025-11-23 05:53:17] 2025-11-23 10:52:41,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:53:17] 2025-11-23 10:52:41,937 | INFO     | sum of deviations: -2378302900792.253
[2025-11-23 05:53:17] 2025-11-23 10:52:41,937 | INFO     | mean x: 1763864751.2048192
[2025-11-23 05:53:17] 2025-11-23 10:52:41,937 | INFO     | mean y: 2811684.5943775102
[2025-11-23 05:53:17] 2025-11-23 10:52:41,937 | INFO     | intersect: 13690348038.482681
[2025-11-23 05:53:17] 2025-11-23 10:52:41,938 | INFO     | chi2: 47.04704163276805
[2025-11-23 05:53:17] 2025-11-23 10:52:41,973 | INFO     | sum of square deviations: 301894107225.0631
[2025-11-23 05:53:17] 2025-11-23 10:52:42,120 | INFO     | sum of deviations: -2041183300639.3962
[2025-11-23 05:53:17] 2025-11-23 10:52:42,120 | INFO     | mean x: 1763864598.730575
[2025-11-23 05:53:17] 2025-11-23 10:52:42,121 | INFO     | mean y: 2822882.34308779
[2025-11-23 05:53:17] 2025-11-23 10:52:42,121 | INFO     | intersect: 11928762731.290752
[2025-11-23 05:53:17] 2025-11-23 10:52:42,123 | INFO     | chi2: 43.078418407484044
[2025-11-23 05:53:17] 2025-11-23 10:52:42,123 | INFO     | current chi2=43.078418407484044 (change=8.435436294297999 %)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,123 | INFO     | right removable region: 990
[2025-11-23 05:53:17] 2025-11-23 10:52:42,156 | INFO     | sum of square deviations: 301891185820.43713
[2025-11-23 05:53:17] 2025-11-23 10:52:42,249 | INFO     | sum of deviations: -2626309603012.4053
[2025-11-23 05:53:17] 2025-11-23 10:52:42,249 | INFO     | mean x: 1763864903.727548
[2025-11-23 05:53:17] 2025-11-23 10:52:42,249 | INFO     | mean y: 2819910.1503531784
[2025-11-23 05:53:17] 2025-11-23 10:52:42,249 | INFO     | intersect: 15347604894.47104
[2025-11-23 05:53:17] 2025-11-23 10:52:42,251 | INFO     | chi2: 45.1180327178537
[2025-11-23 05:53:17] 2025-11-23 10:52:42,251 | INFO     | current chi2=45.1180327178537 (change=4.100170484621508 %)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,251 | INFO     | left removable region: 10
[2025-11-23 05:53:17] 2025-11-23 10:52:42,253 | INFO     | sum of square deviations: 291953460944.7054
[2025-11-23 05:53:17] 2025-11-23 10:52:42,286 | INFO     | sum of deviations: -2264188266954.4185
[2025-11-23 05:53:17] 2025-11-23 10:52:42,286 | INFO     | mean x: 1763864873.282653
[2025-11-23 05:53:17] 2025-11-23 10:52:42,286 | INFO     | mean y: 2834629.1459183674
[2025-11-23 05:53:17] 2025-11-23 10:52:42,286 | INFO     | intersect: 13682145494.845905
[2025-11-23 05:53:17] 2025-11-23 10:52:42,288 | INFO     | chi2: 40.39875188367622
[2025-11-23 05:53:17] 2025-11-23 10:52:42,288 | INFO     | current memory leak: -7.76 B/s (using 980 data points, chi2=40.40)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | could have reported an average CPU frequency of 2759 MHz (37 samples)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | ..............................
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . Timing measurements:
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . get job = 0 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . initial setup = 2 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . payload setup = 9 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . stage-in = 0 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,289 | INFO     | . payload execution = 60718 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,290 | INFO     | . stage-out = 9 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,290 | INFO     | . log creation = 2 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,290 | INFO     | ..............................
[2025-11-23 05:53:17] 2025-11-23 10:52:42,480 | INFO     | 
[2025-11-23 05:53:17] 2025-11-23 10:52:42,480 | INFO     | job summary report
[2025-11-23 05:53:17] 2025-11-23 10:52:42,480 | INFO     | --------------------------------------------------
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | PanDA job id: 6893848594
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | task id: 47523449
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | errors: (none)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | pilot state: finished 
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | transexitcode: 0
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | exeerrorcode: 0
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | exeerrordiag: 
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | exitcode: 0
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | exitmsg: OK
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | cpuconsumptiontime: 234897 s
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | nevents: 1000
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | neventsw: 0
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | pid: 4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | pgrp: 4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | corecount: 8
[2025-11-23 05:53:17] 2025-11-23 10:52:42,481 | INFO     | event service: False
[2025-11-23 05:53:17] 2025-11-23 10:52:42,482 | INFO     | sizes: {0: 2298636, 1: 2298835, 8: 2299097, 11: 2299125, 60731: 2353293, 60732: 2353292, 60741: 2362470, 60744: 2362526, 60781: 2362772}
[2025-11-23 05:53:17] 2025-11-23 10:52:42,482 | INFO     | --------------------------------------------------
[2025-11-23 05:53:17] 2025-11-23 10:52:42,482 | INFO     | 
[2025-11-23 05:53:17] 2025-11-23 10:52:42,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 05:53:17] 2025-11-23 10:52:42,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 05:53:17] 2025-11-23 10:52:42,531 | INFO     | job 6893848594 has completed (purged errors)
[2025-11-23 05:53:17] 2025-11-23 10:52:42,531 | INFO     | overall cleanup function is called
[2025-11-23 05:53:17] 2025-11-23 10:52:43,560 | INFO     | --- collectZombieJob: --- 10, [4164666]
[2025-11-23 05:53:17] 2025-11-23 10:52:43,560 | INFO     | zombie collector waiting for pid 4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:43,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 05:53:17] 2025-11-23 10:52:43,560 | INFO     | collected zombie processes
[2025-11-23 05:53:17] 2025-11-23 10:52:43,560 | INFO     | will attempt to kill all subprocesses of pid=4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:44,061 | INFO     | process IDs to be killed: [4164666] (in reverse order)
[2025-11-23 05:53:17] 2025-11-23 10:52:44,142 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 05:53:17] 2025-11-23 10:52:44,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 05:53:17] 2025-11-23 10:52:44,161 | INFO     | did not find any defunct processes belonging to 4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:44,174 | INFO     | did not find any defunct processes belonging to 4164666
[2025-11-23 05:53:17] 2025-11-23 10:52:44,184 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 05:53:17] 2025-11-23 10:52:44,184 | INFO     | ready for new job
[2025-11-23 05:53:17] 2025-11-23 10:52:44,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 05:53:17] 2025-11-23 10:52:44,203 | INFO     | ***************************************
[2025-11-23 05:53:17] 2025-11-23 10:52:44,204 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 05:53:17] 2025-11-23 10:52:44,204 | INFO     | ***************************************
[2025-11-23 05:53:17] 2025-11-23 10:52:44,204 | INFO     | 
[2025-11-23 05:53:17] 2025-11-23 10:52:44,211 | INFO     | architecture information:
[2025-11-23 05:53:17] 2025-11-23 10:52:44,215 | INFO     | executing command: cat /etc/os-release
[2025-11-23 05:53:17] 2025-11-23 10:52:44,243 | INFO     | cat /etc/os-release:
[2025-11-23 05:53:17] NAME="CentOS Linux"
[2025-11-23 05:53:17] VERSION="7 (Core)"
[2025-11-23 05:53:17] ID="centos"
[2025-11-23 05:53:17] ID_LIKE="rhel fedora"
[2025-11-23 05:53:17] VERSION_ID="7"
[2025-11-23 05:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 05:53:17] ANSI_COLOR="0;31"
[2025-11-23 05:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 05:53:17] HOME_URL="https://www.centos.org/"
[2025-11-23 05:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 05:53:17] 
[2025-11-23 05:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 05:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 05:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 05:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 05:53:17] 
[2025-11-23 05:53:17] 2025-11-23 10:52:44,243 | INFO     | ***************************************
[2025-11-23 05:53:17] 2025-11-23 10:52:44,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 05:53:17] 2025-11-23 10:52:44,815 | INFO     | sufficient remaining disk space (69473402880 B)
[2025-11-23 05:53:17] 2025-11-23 10:52:44,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 05:53:17] 2025-11-23 10:52:44,816 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 05:53:17] 2025-11-23 10:52:44,816 | INFO     | update_server=False
[2025-11-23 05:53:17] 2025-11-23 10:52:44,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 05:53:17] 2025-11-23 10:52:44,930 | INFO     | all data control threads have been joined
[2025-11-23 05:53:17] 2025-11-23 10:52:45,201 | INFO     | all job control threads have been joined
[2025-11-23 05:53:17] 2025-11-23 10:52:45,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 05:53:17] 2025-11-23 10:52:45,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:53:17] 2025-11-23 10:52:45,450 | INFO     | aborting loop
[2025-11-23 05:53:17] 2025-11-23 10:52:45,822 | INFO     | [job] retrieve thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:45,935 | INFO     | [data] control thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,156 | INFO     | all payload control threads have been joined
[2025-11-23 05:53:17] 2025-11-23 10:52:46,209 | INFO     | [job] control thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,410 | INFO     | [payload] validate_post thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,452 | INFO     | [payload] failed_post thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,456 | INFO     | [job] job monitor thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,463 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,464 | INFO     | [job] validate thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,537 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,603 | INFO     | [data] copytool_in thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:46,810 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:47,161 | INFO     | [payload] control thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:47,253 | INFO     | [data] copytool_out thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:47,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:53:17] 2025-11-23 10:52:47,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 05:53:17] 2025-11-23 10:52:48,512 | INFO     | [job] queue monitor thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:52:51,598 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 05:53:17] 2025-11-23 10:53:09,841 | INFO     | [monitor] cgroup control has ended
[2025-11-23 05:53:17] 2025-11-23 10:53:10,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540480096064)>', '<ExcThread(monitor, started 140539668174592)>']
[2025-11-23 05:53:17] 2025-11-23 10:53:15,130 | INFO     | PID=4158300 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 05:53:17] 2025-11-23 10:53:15,130 | INFO     | .. there are 12 such processes running
[2025-11-23 05:53:17] 2025-11-23 10:53:15,130 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 05:53:17] 2025-11-23 10:53:15,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 05:53:17] 2025-11-23 10:53:15,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 05:53:17] 2025-11-23 10:53:15,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 05:53:17] 2025-11-23 10:53:15,131 | INFO     | [monitor] control thread has ended
[2025-11-23 05:53:17] 2025-11-23 10:53:15,642 | INFO     | all workflow threads have been joined
[2025-11-23 05:53:17] 2025-11-23 10:53:15,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 05:53:17] 2025-11-23 10:53:15,642 | INFO     | traces error code: 0
[2025-11-23 05:53:17] 2025-11-23 10:53:15,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 05:53:17] 2025-11-23 10:53:16,053 [wrapper] ==== pilot stdout END ====
[2025-11-23 05:53:17] 2025-11-23 10:53:16,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 05:53:17] 2025-11-23 10:53:16,099 [wrapper] pilotpid: 4158300
[2025-11-23 05:53:17] 2025-11-23 10:53:16,132 [wrapper] Pilot exit status: 0
[2025-11-23 05:53:17] 2025-11-23 10:53:16,226 [wrapper] pandaids: 6893848594
[2025-11-23 05:53:17] 2025-11-23 10:53:16,719 [wrapper] cleanup supervisor_pilot 1381751 4158301
[2025-11-23 05:53:17] 2025-11-23 10:53:16,731 [wrapper] Test setup, not cleaning
[2025-11-23 05:53:17] 2025-11-23 10:53:16,746 [wrapper] apfmon messages muted
[2025-11-23 05:53:17] 2025-11-23 10:53:16,771 [wrapper] ==== wrapper stdout END ====
[2025-11-23 05:53:17] 2025-11-23 10:53:16,788 [wrapper] ==== wrapper stderr END ====
[2025-11-23 05:53:17]  *** Error codes and diagnostics ***
[2025-11-23 05:53:17]     "exeErrorCode": 0,
[2025-11-23 05:53:17]     "exeErrorDiag": "",
[2025-11-23 05:53:17]     "pilotErrorCode": 0,
[2025-11-23 05:53:17]     "pilotErrorDiag": "",
[2025-11-23 05:53:17]  *** Listing of results directory ***
[2025-11-23 05:53:17] total 1316652
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:44 queuedata.json
[2025-11-23 05:53:17] -rwx------. 1 boincer umatlas     36292 Nov 20 05:44 runpilot2-wrapper.sh
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas       100 Nov 22 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 05:53:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 12:58 run_atlas
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas       105 Nov 22 12:58 job.xml
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas 409024911 Nov 22 12:58 EVNT.47493127._000281.pool.root.1
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 12:58 start_atlas.sh
[2025-11-23 05:53:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 12:58 shared
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas    590099 Nov 22 12:58 input.tar.gz
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas         0 Nov 22 12:58 boinc_lockfile
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 12:59 pandaJob.out
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas        57 Nov 22 12:59 setup.sh.local
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas    989776 Nov 22 12:59 agis_schedconf.cvmfs.json
[2025-11-23 05:53:17] drwx------. 5 boincer umatlas      4096 Nov 22 12:59 pilot3
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas       533 Nov 23 04:33 boinc_task_state.xml
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas      6845 Nov 23 05:49 init_data.xml
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas 914941941 Nov 23 05:50 HITS.47523449._002810.pool.root.1
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas      1059 Nov 23 05:51 memory_monitor_summary.json
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas   1526164 Nov 23 05:51 agis_ddmendpoints.agis.ALL.json
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas   2150739 Nov 23 05:52 log.47523449._002810.job.log.tgz.1
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas        95 Nov 23 05:52 pilot_heartbeat.json
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas      8640 Nov 23 05:52 heartbeat.json
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas        29 Nov 23 05:53 wrapper_checkpoint.txt
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 05:53 boinc_mmap_file
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas      4824 Nov 23 05:53 pilotlog.txt
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas   8032146 Nov 23 05:53 log.47523449._002810.job.log.1
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas       353 Nov 23 05:53 output.list
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas       620 Nov 23 05:53 runtime_log
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas  10199040 Nov 23 05:53 result.tar.gz
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas      9353 Nov 23 05:53 runtime_log.err
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas       662 Nov 23 05:53 0uxKDmmKHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTXHKDmh9oROm.diag
[2025-11-23 05:53:17] -rw-r--r--. 1 boincer umatlas     21804 Nov 23 05:53 stderr.txt
[2025-11-23 05:53:17] HITS file was successfully produced:
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas 914941941 Nov 23 05:50 shared/HITS.pool.root.1
[2025-11-23 05:53:17]  *** Contents of shared directory: ***
[2025-11-23 05:53:17] total 1303500
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas 409024911 Nov 22 12:58 ATLAS.root_0
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 12:58 start_atlas.sh
[2025-11-23 05:53:17] -rw-r--r--. 2 boincer umatlas    590099 Nov 22 12:58 input.tar.gz
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas 914941941 Nov 23 05:50 HITS.pool.root.1
[2025-11-23 05:53:17] -rw-------. 1 boincer umatlas  10199040 Nov 23 05:53 result.tar.gz
05:53:18 (4154457): run_atlas exited; CPU time 235633.709994
05:53:18 (4154457): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN