Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:26 (728831): wrapper (7.7.26015): starting
00:01:26 (728831): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:01:26] Arguments: --nthreads 12
[2025-11-24 00:01:26] Threads: 12
[2025-11-24 00:01:26] Checking for CVMFS
[2025-11-24 00:01:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:01:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:01:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:01:29] 2.13.2.0 10183 30515 181064 153233 1 64 39152680 39288832 7799 16776704 0 20328575 99.564 20972130 39237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:01:29] CVMFS is ok
[2025-11-24 00:01:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:01:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:01:29] Further information can be found at the LHC@home message board.
[2025-11-24 00:01:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:01:29] Checking for apptainer binary...
[2025-11-24 00:01:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:01:29] Running /usr/bin/apptainer --version
[2025-11-24 00:01:30] apptainer version 1.4.4-1.el9
[2025-11-24 00:01:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:01:32] c-210-5.aglt2.org
[2025-11-24 00:01:32] apptainer works
[2025-11-24 00:01:32] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:01:32] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:01:32] Starting ATLAS job with PandaID=6891588107
[2025-11-24 00:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:03:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:03:28] 2025-11-25 05:29:00,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:03:28] 2025-11-25 05:29:01,021 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:03:28] 2025-11-25 05:29:01,023 | INFO     | sum of square deviations: 925932531043.999
[2025-11-25 02:03:28] 2025-11-25 05:29:01,065 | INFO     | time since job start (87948s) is within the limit (172800.0s)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,084 | INFO     | sum of deviations: 6518702520763.999
[2025-11-25 02:03:28] 2025-11-25 05:29:01,084 | INFO     | mean x: 1764004591.7006946
[2025-11-25 02:03:28] 2025-11-25 05:29:01,084 | INFO     | mean y: 3576052.1902777776
[2025-11-25 02:03:28] 2025-11-25 05:29:01,085 | INFO     | intersect: -12415278230.414217
[2025-11-25 02:03:28] 2025-11-25 05:29:01,087 | INFO     | chi2: 10.022890545380646
[2025-11-25 02:03:28] 2025-11-25 05:29:01,089 | INFO     | sum of square deviations: 916323786401.5308
[2025-11-25 02:03:28] 2025-11-25 05:29:01,141 | INFO     | sum of deviations: 7155732706003.563
[2025-11-25 02:03:28] 2025-11-25 05:29:01,141 | INFO     | mean x: 1764004439.2216027
[2025-11-25 02:03:28] 2025-11-25 05:29:01,142 | INFO     | mean y: 3586162.5170731707
[2025-11-25 02:03:28] 2025-11-25 05:29:01,142 | INFO     | intersect: -13771833014.195473
[2025-11-25 02:03:28] 2025-11-25 05:29:01,144 | INFO     | chi2: 6.455156678185664
[2025-11-25 02:03:28] 2025-11-25 05:29:01,144 | INFO     | current chi2=6.455156678185664 (change=35.59585781208875 %)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,146 | INFO     | sum of square deviations: 906781524378.7471
[2025-11-25 02:03:28] 2025-11-25 05:29:01,198 | INFO     | sum of deviations: 7562496625430.173
[2025-11-25 02:03:28] 2025-11-25 05:29:01,199 | INFO     | mean x: 1764004286.7405593
[2025-11-25 02:03:28] 2025-11-25 05:29:01,199 | INFO     | mean y: 3592662.2349650348
[2025-11-25 02:03:28] 2025-11-25 05:29:01,199 | INFO     | intersect: -14708083863.000277
[2025-11-25 02:03:28] 2025-11-25 05:29:01,201 | INFO     | chi2: 4.837255161434768
[2025-11-25 02:03:28] 2025-11-25 05:29:01,201 | INFO     | current chi2=4.837255161434768 (change=25.063706388698158 %)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,203 | INFO     | sum of square deviations: 897304901491.0537
[2025-11-25 02:03:28] 2025-11-25 05:29:01,255 | INFO     | sum of deviations: 7858887266856.261
[2025-11-25 02:03:28] 2025-11-25 05:29:01,255 | INFO     | mean x: 1764004134.2526317
[2025-11-25 02:03:28] 2025-11-25 05:29:01,256 | INFO     | mean y: 3597430.132631579
[2025-11-25 02:03:28] 2025-11-25 05:29:01,256 | INFO     | intersect: -15446122733.351873
[2025-11-25 02:03:28] 2025-11-25 05:29:01,258 | INFO     | chi2: 3.856742630821363
[2025-11-25 02:03:28] 2025-11-25 05:29:01,258 | INFO     | current chi2=3.856742630821363 (change=20.27001879972313 %)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,258 | INFO     | right removable region: 1424
[2025-11-25 02:03:28] 2025-11-25 05:29:01,260 | INFO     | sum of square deviations: 916318602508.9716
[2025-11-25 02:03:28] 2025-11-25 05:29:01,312 | INFO     | sum of deviations: 5968960206248.348
[2025-11-25 02:03:28] 2025-11-25 05:29:01,313 | INFO     | mean x: 1764004744.220906
[2025-11-25 02:03:28] 2025-11-25 05:29:01,313 | INFO     | mean y: 3584767.661324042
[2025-11-25 02:03:28] 2025-11-25 05:29:01,313 | INFO     | intersect: -11487259239.060446
[2025-11-25 02:03:28] 2025-11-25 05:29:01,315 | INFO     | chi2: 7.434644702379961
[2025-11-25 02:03:28] 2025-11-25 05:29:01,315 | INFO     | current chi2=7.434644702379961 (change=25.82334737949979 %)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,317 | INFO     | sum of square deviations: 906773609853.8925
[2025-11-25 02:03:28] 2025-11-25 05:29:01,369 | INFO     | sum of deviations: 5771044523654.844
[2025-11-25 02:03:28] 2025-11-25 05:29:01,370 | INFO     | mean x: 1764004896.7237763
[2025-11-25 02:03:28] 2025-11-25 05:29:01,370 | INFO     | mean y: 3587929.6223776224
[2025-11-25 02:03:28] 2025-11-25 05:29:01,370 | INFO     | intersect: -11223195347.1631
[2025-11-25 02:03:28] 2025-11-25 05:29:01,372 | INFO     | chi2: 7.274276581518853
[2025-11-25 02:03:28] 2025-11-25 05:29:01,372 | INFO     | current chi2=7.274276581518853 (change=2.1570381273199404 %)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,372 | INFO     | left removable region: 20
[2025-11-25 02:03:28] 2025-11-25 05:29:01,374 | INFO     | sum of square deviations: 858214462012.7488
[2025-11-25 02:03:28] 2025-11-25 05:29:01,425 | INFO     | sum of deviations: 6778427177959.856
[2025-11-25 02:03:28] 2025-11-25 05:29:01,425 | INFO     | mean x: 1764004713.7877493
[2025-11-25 02:03:28] 2025-11-25 05:29:01,425 | INFO     | mean y: 3615811.04985755
[2025-11-25 02:03:28] 2025-11-25 05:29:01,425 | INFO     | intersect: -13929005955.711458
[2025-11-25 02:03:28] 2025-11-25 05:29:01,427 | INFO     | chi2: 0.827945943941165
[2025-11-25 02:03:28] 2025-11-25 05:29:01,428 | INFO     | current memory leak: 7.90 B/s (using 1404 data points, chi2=0.83)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,429 | INFO     | could have reported an average CPU frequency of 2599 MHz (51 samples)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | ..............................
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . Timing measurements:
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . get job = 0 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . initial setup = 8 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . payload setup = 8 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . stage-in = 0 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . payload execution = 87832 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,430 | INFO     | . stage-out = 4 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,431 | INFO     | . log creation = 1 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,431 | INFO     | ..............................
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | 
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | job summary report
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | --------------------------------------------------
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | PanDA job id: 6891588107
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | task id: 47493068
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | errors: (none)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:03:28] 2025-11-25 05:29:01,926 | INFO     | pilot state: finished 
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | transexitcode: 0
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | exeerrorcode: 0
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | exeerrordiag: 
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | exitcode: 0
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | exitmsg: OK
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | cpuconsumptiontime: 295920 s
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | nevents: 1000
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | neventsw: 0
[2025-11-25 02:03:28] 2025-11-25 05:29:01,927 | INFO     | pid: 741729
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | pgrp: 741729
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | corecount: 12
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | event service: False
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | sizes: {0: 2298796, 1: 2298796, 12: 2298824, 23: 2298852, 34: 2298880, 40: 2299170, 45: 2299326, 87845: 2364177, 87851: 2373962, 87853: 2374018, 87861: 2374264}
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | --------------------------------------------------
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | 
[2025-11-25 02:03:28] 2025-11-25 05:29:01,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:03:28] 2025-11-25 05:29:01,952 | INFO     | job 6891588107 has completed (purged errors)
[2025-11-25 02:03:28] 2025-11-25 05:29:01,953 | INFO     | overall cleanup function is called
[2025-11-25 02:03:28] 2025-11-25 05:29:02,972 | INFO     | --- collectZombieJob: --- 10, [741729]
[2025-11-25 02:03:28] 2025-11-25 05:29:02,973 | INFO     | zombie collector waiting for pid 741729
[2025-11-25 02:03:28] 2025-11-25 05:29:02,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:03:28] 2025-11-25 05:29:02,973 | INFO     | collected zombie processes
[2025-11-25 02:03:28] 2025-11-25 05:29:02,973 | INFO     | will attempt to kill all subprocesses of pid=741729
[2025-11-25 02:03:28] 2025-11-25 05:29:03,233 | INFO     | process IDs to be killed: [741729] (in reverse order)
[2025-11-25 02:03:28] 2025-11-25 05:29:03,313 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:03:28] 2025-11-25 05:29:03,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:03:28] 2025-11-25 05:29:03,323 | INFO     | did not find any defunct processes belonging to 741729
[2025-11-25 02:03:28] 2025-11-25 05:29:03,332 | INFO     | did not find any defunct processes belonging to 741729
[2025-11-25 02:03:28] 2025-11-25 05:29:03,334 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:03:28] 2025-11-25 05:29:03,334 | INFO     | ready for new job
[2025-11-25 02:03:28] 2025-11-25 05:29:03,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:03:28] 2025-11-25 05:29:03,341 | INFO     | ***************************************
[2025-11-25 02:03:28] 2025-11-25 05:29:03,341 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:03:28] 2025-11-25 05:29:03,341 | INFO     | ***************************************
[2025-11-25 02:03:28] 2025-11-25 05:29:03,342 | INFO     | 
[2025-11-25 02:03:28] 2025-11-25 05:29:03,344 | INFO     | architecture information:
[2025-11-25 02:03:28] 2025-11-25 05:29:03,344 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:03:28] 2025-11-25 05:29:03,364 | INFO     | cat /etc/os-release:
[2025-11-25 02:03:28] NAME="CentOS Linux"
[2025-11-25 02:03:28] VERSION="7 (Core)"
[2025-11-25 02:03:28] ID="centos"
[2025-11-25 02:03:28] ID_LIKE="rhel fedora"
[2025-11-25 02:03:28] VERSION_ID="7"
[2025-11-25 02:03:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:03:28] ANSI_COLOR="0;31"
[2025-11-25 02:03:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:03:28] HOME_URL="https://www.centos.org/"
[2025-11-25 02:03:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:03:28] 
[2025-11-25 02:03:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:03:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:03:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:03:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:03:28] 
[2025-11-25 02:03:28] 2025-11-25 05:29:03,364 | INFO     | ***************************************
[2025-11-25 02:03:28] 2025-11-25 05:29:03,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 02:03:28] 2025-11-25 05:29:03,888 | INFO     | sufficient remaining disk space (50139758592 B)
[2025-11-25 02:03:28] 2025-11-25 05:29:03,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:03:28] 2025-11-25 05:29:03,889 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:03:28] 2025-11-25 05:29:03,889 | INFO     | update_server=False
[2025-11-25 02:03:28] 2025-11-25 05:29:03,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:03:28] 2025-11-25 05:29:03,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:03:28] 2025-11-25 05:29:03,890 | INFO     | aborting loop
[2025-11-25 02:03:28] 2025-11-25 05:29:03,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:03:28] 2025-11-25 05:29:03,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:03:28] 2025-11-25 05:29:03,908 | INFO     | all payload control threads have been joined
[2025-11-25 02:03:28] 2025-11-25 05:29:04,720 | INFO     | all data control threads have been joined
[2025-11-25 02:03:28] 2025-11-25 05:29:04,897 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:04,897 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:04,917 | INFO     | [payload] control thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:04,975 | INFO     | all job control threads have been joined
[2025-11-25 02:03:28] 2025-11-25 05:29:05,124 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,201 | INFO     | [job] validate thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,226 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,532 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,719 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,723 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,730 | INFO     | [data] control thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,871 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,916 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:05,982 | INFO     | [job] control thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:06,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:06,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:03:28] 2025-11-25 05:29:07,563 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:07,922 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:03:28] 2025-11-25 05:29:34,471 | INFO     | PID=733879 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 02:03:28] 2025-11-25 05:29:34,471 | INFO     | .. there are 8 such processes running
[2025-11-25 02:03:28] 2025-11-25 05:29:34,472 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:03:28] 2025-11-25 05:29:34,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:03:28] 2025-11-25 05:29:34,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:03:28] 2025-11-25 05:30:01,645 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:03:28] 2025-11-25 05:30:02,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821815912256)>', '<ExcThread(monitor, started 139821158745856)>']
[2025-11-25 02:03:28] 2025-11-25 05:30:02,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:03:28] 2025-11-25 05:30:02,665 | INFO     | [monitor] control thread has ended
[2025-11-25 02:03:28] 2025-11-25 05:30:07,120 | INFO     | all workflow threads have been joined
[2025-11-25 02:03:28] 2025-11-25 05:30:07,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:03:28] 2025-11-25 05:30:07,121 | INFO     | traces error code: 0
[2025-11-25 02:03:28] 2025-11-25 05:30:07,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:03:28] 2025-11-25 05:30:07,283 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:03:28] 2025-11-25 05:30:07,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:03:28] 2025-11-25 05:30:07,289 [wrapper] pilotpid: 733879
[2025-11-25 02:03:28] 2025-11-25 05:30:07,293 [wrapper] Pilot exit status: 0
[2025-11-25 02:03:28] 2025-11-25 05:30:07,310 [wrapper] pandaids: 6891588107
[2025-11-25 02:03:28] 2025-11-25 05:30:07,363 [wrapper] cleanup supervisor_pilot 2731593 733880
[2025-11-25 02:03:28] 2025-11-25 05:30:07,366 [wrapper] Test setup, not cleaning
[2025-11-25 02:03:28] 2025-11-25 05:30:07,370 [wrapper] apfmon messages muted
[2025-11-25 02:03:28] 2025-11-25 05:30:07,373 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:03:28] 2025-11-25 05:30:07,377 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:03:28]  *** Error codes and diagnostics ***
[2025-11-25 02:03:28]     "exeErrorCode": 0,
[2025-11-25 02:03:28]     "exeErrorDiag": "",
[2025-11-25 02:03:28]     "pilotErrorCode": 0,
[2025-11-25 02:03:28]     "pilotErrorDiag": "",
[2025-11-25 02:03:28]  *** Listing of results directory ***
[2025-11-25 02:03:28] total 1330112
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:35 queuedata.json
[2025-11-25 02:03:28] -rwx------. 1 boincer umatlas     36292 Nov 18 12:36 runpilot2-wrapper.sh
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:03:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:01 run_atlas
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:01 job.xml
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas 409278411 Nov 24 00:01 EVNT.47493065._000507.pool.root.1
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 00:01 start_atlas.sh
[2025-11-25 02:03:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:01 shared
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:01 input.tar.gz
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:01 boinc_lockfile
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas      2773 Nov 24 00:01 pandaJob.out
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-25 02:03:28] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas       533 Nov 25 00:09 boinc_task_state.xml
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas 921227929 Nov 25 00:28 HITS.47493068._005065.pool.root.1
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas      1057 Nov 25 00:28 memory_monitor_summary.json
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas   1516227 Nov 25 00:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas   2877848 Nov 25 00:28 log.47493068._005065.job.log.tgz.1
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas      8618 Nov 25 00:29 heartbeat.json
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas        95 Nov 25 00:29 pilot_heartbeat.json
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas      4822 Nov 25 00:30 pilotlog.txt
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas  10928288 Nov 25 00:30 log.47493068._005065.job.log.1
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas       353 Nov 25 00:30 output.list
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas       620 Nov 25 00:30 runtime_log
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas  13824000 Nov 25 00:30 result.tar.gz
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas       659 Nov 25 00:30 VzyKDm8nef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI6FKDmmzDxqn.diag
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas      8701 Nov 25 00:30 runtime_log.err
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 02:03 init_data.xml
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 02:03 boinc_mmap_file
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas        29 Nov 25 02:03 wrapper_checkpoint.txt
[2025-11-25 02:03:28] -rw-r--r--. 1 boincer umatlas     21106 Nov 25 02:03 stderr.txt
[2025-11-25 02:03:28] HITS file was successfully produced:
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas 921227929 Nov 25 00:28 shared/HITS.pool.root.1
[2025-11-25 02:03:28]  *** Contents of shared directory: ***
[2025-11-25 02:03:28] total 1313432
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas 409278411 Nov 24 00:01 ATLAS.root_0
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 00:01 start_atlas.sh
[2025-11-25 02:03:28] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:01 input.tar.gz
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas 921227929 Nov 25 00:28 HITS.pool.root.1
[2025-11-25 02:03:28] -rw-------. 1 boincer umatlas  13824000 Nov 25 00:30 result.tar.gz
02:03:29 (728831): run_atlas exited; CPU time 297030.044265
02:03:29 (728831): called boinc_finish(0)

</stderr_txt>
]]>

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