Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:11:02 (1469869): wrapper (7.7.26015): starting
13:11:02 (1469869): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 13:11:02] Arguments: --nthreads 8
[2025-11-22 13:11:02] Threads: 8
[2025-11-22 13:11:02] Checking for CVMFS
[2025-11-22 13:11:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:11:03] 2.13.3.0 1933508 21835 239320 153180 1 458 27614462 32503808 36341 16776704 0 115697269 99.500 141420340 39065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 13:11:03] CVMFS is ok
[2025-11-22 13:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:11:03] Further information can be found at the LHC@home message board.
[2025-11-22 13:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:11:03] Checking for apptainer binary...
[2025-11-22 13:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:11:03] Running /usr/bin/apptainer --version
[2025-11-22 13:11:03] apptainer version 1.4.4-1.el9
[2025-11-22 13:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:11:03] c7-3-16.aglt2.org
[2025-11-22 13:11:03] apptainer works
[2025-11-22 13:11:03] Set ATHENA_PROC_NUMBER=8
[2025-11-22 13:11:03] Set ATHENA_CORE_NUMBER=8
[2025-11-22 13:11:03] Starting ATLAS job with PandaID=6891584501
[2025-11-22 13:11:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 05:31:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 05:31:05] 2025-11-23 10:29:59,244 | INFO     | total number of processed events: 1000 (read)
[2025-11-23 05:31:05] 2025-11-23 10:29:59,250 | INFO     | executing command: lscpu
[2025-11-23 05:31:05] 2025-11-23 10:29:59,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 05:31:05] 2025-11-23 10:29:59,723 | INFO     | time since job start (58723s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:00,874 | INFO     | monitor loop #3640: job 0:6891584501 is in state 'finished'
[2025-11-23 05:31:05] 2025-11-23 10:30:00,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:31:05] 2025-11-23 10:30:01,732 | INFO     | time since job start (58725s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:03,379 | INFO     | monitor loop #3641: job 0:6891584501 is in state 'finished'
[2025-11-23 05:31:05] 2025-11-23 10:30:03,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:31:05] 2025-11-23 10:30:03,740 | INFO     | time since job start (58727s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:05,749 | INFO     | time since job start (58729s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:05,895 | INFO     | monitor loop #3642: job 0:6891584501 is in state 'finished'
[2025-11-23 05:31:05] 2025-11-23 10:30:05,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:31:05] 2025-11-23 10:30:07,759 | INFO     | time since job start (58731s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:08,418 | INFO     | monitor loop #3643: job 0:6891584501 is in state 'finished'
[2025-11-23 05:31:05] 2025-11-23 10:30:08,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:31:05] 2025-11-23 10:30:09,772 | INFO     | time since job start (58733s) is within the limit (172800.0s)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 05:31:05] 2025-11-23 10:30:10,368 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3271.453802083334
[2025-11-23 05:31:05] 2025-11-23 10:30:10,394 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891584501/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,395 | INFO     | extracted standard info from prmon json
[2025-11-23 05:31:05] 2025-11-23 10:30:10,395 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 05:31:05] 2025-11-23 10:30:10,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 05:31:05] 2025-11-23 10:30:10,455 | INFO     | fitting pss+swap vs Time
[2025-11-23 05:31:05] 2025-11-23 10:30:10,465 | INFO     | sum of square deviations: 276056608610.98975
[2025-11-23 05:31:05] 2025-11-23 10:30:10,568 | INFO     | sum of deviations: 10529490967870.451
[2025-11-23 05:31:05] 2025-11-23 10:30:10,569 | INFO     | mean x: 1763864416.4116423
[2025-11-23 05:31:05] 2025-11-23 10:30:10,569 | INFO     | mean y: 3334194.7993762996
[2025-11-23 05:31:05] 2025-11-23 10:30:10,569 | INFO     | intersect: -67274875642.68503
[2025-11-23 05:31:05] 2025-11-23 10:30:10,570 | INFO     | chi2: 23.060275749491524
[2025-11-23 05:31:05] 2025-11-23 10:30:10,596 | INFO     | sum of square deviations: 271774739989.31226
[2025-11-23 05:31:05] 2025-11-23 10:30:10,647 | INFO     | sum of deviations: 10903861295956.45
[2025-11-23 05:31:05] 2025-11-23 10:30:10,647 | INFO     | mean x: 1763864263.9164054
[2025-11-23 05:31:05] 2025-11-23 10:30:10,648 | INFO     | mean y: 3347527.8056426332
[2025-11-23 05:31:05] 2025-11-23 10:30:10,648 | INFO     | intersect: -70764565926.53214
[2025-11-23 05:31:05] 2025-11-23 10:30:10,649 | INFO     | chi2: 19.574260596852053
[2025-11-23 05:31:05] 2025-11-23 10:30:10,649 | INFO     | current chi2=19.574260596852053 (change=15.116970805157598 %)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,649 | INFO     | right removable region: 956
[2025-11-23 05:31:05] 2025-11-23 10:30:10,650 | INFO     | sum of square deviations: 271774205019.31268
[2025-11-23 05:31:05] 2025-11-23 10:30:10,742 | INFO     | sum of deviations: 10248017974332.63
[2025-11-23 05:31:05] 2025-11-23 10:30:10,743 | INFO     | mean x: 1763864568.9164054
[2025-11-23 05:31:05] 2025-11-23 10:30:10,743 | INFO     | mean y: 3344204.570532915
[2025-11-23 05:31:05] 2025-11-23 10:30:10,743 | INFO     | intersect: -66508177024.08796
[2025-11-23 05:31:05] 2025-11-23 10:30:10,744 | INFO     | chi2: 21.43215305066168
[2025-11-23 05:31:05] 2025-11-23 10:30:10,744 | INFO     | current chi2=21.43215305066168 (change=7.060291544283658 %)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,744 | INFO     | left removable region: 10
[2025-11-23 05:31:05] 2025-11-23 10:30:10,745 | INFO     | sum of square deviations: 262510031891.17175
[2025-11-23 05:31:05] 2025-11-23 10:30:10,799 | INFO     | sum of deviations: 10545514373929.588
[2025-11-23 05:31:05] 2025-11-23 10:30:10,800 | INFO     | mean x: 1763864538.4249473
[2025-11-23 05:31:05] 2025-11-23 10:30:10,800 | INFO     | mean y: 3365888.339323467
[2025-11-23 05:31:05] 2025-11-23 10:30:10,800 | INFO     | intersect: -70854340804.31873
[2025-11-23 05:31:05] 2025-11-23 10:30:10,801 | INFO     | chi2: 17.23629267615661
[2025-11-23 05:31:05] 2025-11-23 10:30:10,801 | INFO     | current memory leak: 40.17 B/s (using 946 data points, chi2=17.24)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | could have reported an average CPU frequency of 3148 MHz (36 samples)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | ..............................
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . Timing measurements:
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . get job = 0 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . initial setup = 2 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . payload setup = 6 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . stage-in = 0 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . payload execution = 58686 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,802 | INFO     | . stage-out = 7 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,803 | INFO     | . log creation = 1 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,803 | INFO     | ..............................
[2025-11-23 05:31:05] 2025-11-23 10:30:10,882 | INFO     | 
[2025-11-23 05:31:05] 2025-11-23 10:30:10,882 | INFO     | job summary report
[2025-11-23 05:31:05] 2025-11-23 10:30:10,882 | INFO     | --------------------------------------------------
[2025-11-23 05:31:05] 2025-11-23 10:30:10,882 | INFO     | PanDA job id: 6891584501
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | task id: 47493068
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | errors: (none)
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | pilot state: finished 
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | transexitcode: 0
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | exeerrorcode: 0
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | exeerrordiag: 
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | exitcode: 0
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | exitmsg: OK
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | cpuconsumptiontime: 199515 s
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | nevents: 1000
[2025-11-23 05:31:05] 2025-11-23 10:30:10,883 | INFO     | neventsw: 0
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | pid: 1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | pgrp: 1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | corecount: 8
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | event service: False
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | sizes: {0: 2298795, 6: 2299057, 11: 2299085, 58696: 2351733, 58705: 2360727, 58706: 2360783, 58718: 2361157}
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | --------------------------------------------------
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | 
[2025-11-23 05:31:05] 2025-11-23 10:30:10,884 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 05:31:05] 2025-11-23 10:30:11,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | job 6891584501 has completed (purged errors)
[2025-11-23 05:31:05] 2025-11-23 10:30:11,014 | INFO     | overall cleanup function is called
[2025-11-23 05:31:05] 2025-11-23 10:30:12,095 | INFO     | --- collectZombieJob: --- 10, [1484142]
[2025-11-23 05:31:05] 2025-11-23 10:30:12,095 | INFO     | zombie collector waiting for pid 1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:12,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 05:31:05] 2025-11-23 10:30:12,096 | INFO     | collected zombie processes
[2025-11-23 05:31:05] 2025-11-23 10:30:12,096 | INFO     | will attempt to kill all subprocesses of pid=1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:13,551 | INFO     | process IDs to be killed: [1484142] (in reverse order)
[2025-11-23 05:31:05] 2025-11-23 10:30:13,814 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 05:31:05] 2025-11-23 10:30:13,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 05:31:05] 2025-11-23 10:30:13,876 | INFO     | did not find any defunct processes belonging to 1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:13,916 | INFO     | did not find any defunct processes belonging to 1484142
[2025-11-23 05:31:05] 2025-11-23 10:30:13,917 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 05:31:05] 2025-11-23 10:30:13,917 | INFO     | ready for new job
[2025-11-23 05:31:05] 2025-11-23 10:30:13,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 05:31:05] 2025-11-23 10:30:13,921 | INFO     | ***************************************
[2025-11-23 05:31:05] 2025-11-23 10:30:13,922 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 05:31:05] 2025-11-23 10:30:13,922 | INFO     | ***************************************
[2025-11-23 05:31:05] 2025-11-23 10:30:13,922 | INFO     | 
[2025-11-23 05:31:05] 2025-11-23 10:30:13,927 | INFO     | architecture information:
[2025-11-23 05:31:05] 2025-11-23 10:30:13,929 | INFO     | executing command: cat /etc/os-release
[2025-11-23 05:31:05] 2025-11-23 10:30:13,988 | INFO     | cat /etc/os-release:
[2025-11-23 05:31:05] NAME="CentOS Linux"
[2025-11-23 05:31:05] VERSION="7 (Core)"
[2025-11-23 05:31:05] ID="centos"
[2025-11-23 05:31:05] ID_LIKE="rhel fedora"
[2025-11-23 05:31:05] VERSION_ID="7"
[2025-11-23 05:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 05:31:05] ANSI_COLOR="0;31"
[2025-11-23 05:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 05:31:05] HOME_URL="https://www.centos.org/"
[2025-11-23 05:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 05:31:05] 
[2025-11-23 05:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 05:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 05:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 05:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 05:31:05] 
[2025-11-23 05:31:05] 2025-11-23 10:30:13,989 | INFO     | ***************************************
[2025-11-23 05:31:05] 2025-11-23 10:30:14,492 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 05:31:05] 2025-11-23 10:30:14,519 | INFO     | sufficient remaining disk space (90602209280 B)
[2025-11-23 05:31:05] 2025-11-23 10:30:14,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 05:31:05] 2025-11-23 10:30:14,520 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 05:31:05] 2025-11-23 10:30:14,520 | INFO     | update_server=False
[2025-11-23 05:31:05] 2025-11-23 10:30:14,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 05:31:05] 2025-11-23 10:30:14,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 05:31:05] 2025-11-23 10:30:14,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 05:31:05] 2025-11-23 10:30:14,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:31:05] 2025-11-23 10:30:14,523 | INFO     | aborting loop
[2025-11-23 05:31:05] 2025-11-23 10:30:14,773 | INFO     | all data control threads have been joined
[2025-11-23 05:31:05] 2025-11-23 10:30:14,979 | INFO     | all job control threads have been joined
[2025-11-23 05:31:05] 2025-11-23 10:30:15,132 | INFO     | all payload control threads have been joined
[2025-11-23 05:31:05] 2025-11-23 10:30:15,525 | INFO     | [job] retrieve thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,548 | INFO     | [job] job monitor thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,574 | INFO     | [payload] failed_post thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,780 | INFO     | [data] control thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,802 | INFO     | [data] copytool_in thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,860 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:15,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:31:05] 2025-11-23 10:30:15,985 | INFO     | [job] control thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,140 | INFO     | [payload] control thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,205 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,446 | INFO     | [job] validate thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,531 | INFO     | [data] copytool_out thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,863 | INFO     | [payload] validate_post thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:16,906 | INFO     | [job] queue monitor thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:18,544 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 05:31:05] 2025-11-23 10:30:44,095 | INFO     | PID=1476208 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 05:31:05] 2025-11-23 10:30:44,098 | INFO     | .. there are 58 such processes running
[2025-11-23 05:31:05] 2025-11-23 10:30:44,099 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 05:31:05] 2025-11-23 10:30:44,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 05:31:05] 2025-11-23 10:30:44,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 05:31:05] 2025-11-23 10:30:57,730 | INFO     | [monitor] cgroup control has ended
[2025-11-23 05:31:05] 2025-11-23 10:30:59,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080309589824)>', '<ExcThread(monitor, started 140079670482688)>']
[2025-11-23 05:31:05] 2025-11-23 10:31:00,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 05:31:05] 2025-11-23 10:31:00,220 | INFO     | [monitor] control thread has ended
[2025-11-23 05:31:05] 2025-11-23 10:31:04,567 | INFO     | all workflow threads have been joined
[2025-11-23 05:31:05] 2025-11-23 10:31:04,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 05:31:05] 2025-11-23 10:31:04,568 | INFO     | traces error code: 0
[2025-11-23 05:31:05] 2025-11-23 10:31:04,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 05:31:05] 2025-11-23 10:31:04,850 [wrapper] ==== pilot stdout END ====
[2025-11-23 05:31:05] 2025-11-23 10:31:04,892 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 05:31:05] 2025-11-23 10:31:04,905 [wrapper] pilotpid: 1476208
[2025-11-23 05:31:05] 2025-11-23 10:31:04,909 [wrapper] Pilot exit status: 0
[2025-11-23 05:31:05] 2025-11-23 10:31:04,938 [wrapper] pandaids: 6891584501
[2025-11-23 05:31:05] 2025-11-23 10:31:05,145 [wrapper] cleanup supervisor_pilot 2608276 1476209
[2025-11-23 05:31:05] 2025-11-23 10:31:05,149 [wrapper] Test setup, not cleaning
[2025-11-23 05:31:05] 2025-11-23 10:31:05,151 [wrapper] apfmon messages muted
[2025-11-23 05:31:05] 2025-11-23 10:31:05,153 [wrapper] ==== wrapper stdout END ====
[2025-11-23 05:31:05] 2025-11-23 10:31:05,155 [wrapper] ==== wrapper stderr END ====
[2025-11-23 05:31:05]  *** Error codes and diagnostics ***
[2025-11-23 05:31:05]     "exeErrorCode": 0,
[2025-11-23 05:31:05]     "exeErrorDiag": "",
[2025-11-23 05:31:05]     "pilotErrorCode": 0,
[2025-11-23 05:31:05]     "pilotErrorDiag": "",
[2025-11-23 05:31:05]  *** Listing of results directory ***
[2025-11-23 05:31:05] total 1313300
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:15 queuedata.json
[2025-11-23 05:31:05] -rwx------. 1 boincer umatlas     36292 Nov 18 12:17 runpilot2-wrapper.sh
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas       100 Nov 22 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 05:31:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 13:11 run_atlas
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas       105 Nov 22 13:11 job.xml
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas 408872931 Nov 22 13:11 EVNT.47493065._000463.pool.root.1
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 13:11 start_atlas.sh
[2025-11-23 05:31:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 13:11 shared
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas    590103 Nov 22 13:11 input.tar.gz
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas         0 Nov 22 13:11 boinc_lockfile
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas      2772 Nov 22 13:11 pandaJob.out
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas    989776 Nov 22 13:11 agis_schedconf.cvmfs.json
[2025-11-23 05:31:05] drwx------. 5 boincer umatlas      4096 Nov 22 13:11 pilot3
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas       532 Nov 23 05:12 boinc_task_state.xml
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas 912568246 Nov 23 05:28 HITS.47493068._004624.pool.root.1
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas      1075 Nov 23 05:29 memory_monitor_summary.json
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas   1526164 Nov 23 05:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas   2137406 Nov 23 05:29 log.47493068._004624.job.log.tgz.1
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas      8641 Nov 23 05:30 heartbeat.json
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas      6948 Nov 23 05:30 init_data.xml
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas        95 Nov 23 05:30 pilot_heartbeat.json
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 05:31 boinc_mmap_file
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas        29 Nov 23 05:31 wrapper_checkpoint.txt
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas      4824 Nov 23 05:31 pilotlog.txt
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas   7591878 Nov 23 05:31 log.47493068._004624.job.log.1
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas       353 Nov 23 05:31 output.list
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas       620 Nov 23 05:31 runtime_log
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas   9748480 Nov 23 05:31 result.tar.gz
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas      8699 Nov 23 05:31 runtime_log.err
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas       665 Nov 23 05:31 7WBMDmZVef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnzFKDmgFnNBo.diag
[2025-11-23 05:31:05] -rw-r--r--. 1 boincer umatlas     21798 Nov 23 05:31 stderr.txt
[2025-11-23 05:31:05] HITS file was successfully produced:
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas 912568246 Nov 23 05:28 shared/HITS.pool.root.1
[2025-11-23 05:31:05]  *** Contents of shared directory: ***
[2025-11-23 05:31:05] total 1300596
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas 408872931 Nov 22 13:11 ATLAS.root_0
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 13:11 start_atlas.sh
[2025-11-23 05:31:05] -rw-r--r--. 2 boincer umatlas    590103 Nov 22 13:11 input.tar.gz
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas 912568246 Nov 23 05:28 HITS.pool.root.1
[2025-11-23 05:31:05] -rw-------. 1 boincer umatlas   9748480 Nov 23 05:31 result.tar.gz
05:31:07 (1469869): run_atlas exited; CPU time 199741.198858
05:31:07 (1469869): called boinc_finish(0)

</stderr_txt>
]]>

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