Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:08:27 (23648): wrapper (7.7.26015): starting
02:08:27 (23648): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 02:08:27] Arguments: --nthreads 8
[2025-11-25 02:08:27] Threads: 8
[2025-11-25 02:08:27] Checking for CVMFS
[2025-11-25 02:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:08:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:08:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:08:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:08:30] 2.11.2.0 11478 283200 141160 153264 0 85 21395138 25165824 1027 130560 9 140504143 99.877 80937562 3042 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 02:08:30] CVMFS is ok
[2025-11-25 02:08:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:08:30] Checking for apptainer binary...
[2025-11-25 02:08:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:08:30] Running /usr/bin/apptainer --version
[2025-11-25 02:08:30] apptainer version 1.3.2-1.el7
[2025-11-25 02:08:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:08:59] cg-vwn355.simple-grid.lan
[2025-11-25 02:08:59] apptainer works
[2025-11-25 02:08:59] Set ATHENA_PROC_NUMBER=8
[2025-11-25 02:08:59] Set ATHENA_CORE_NUMBER=8
[2025-11-25 02:08:59] Starting ATLAS job with PandaID=6894287691
[2025-11-25 02:08:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:12:11]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:12:11] 2025-11-26 02:11:23,974 | INFO     | monitor loop #6058: job 0:6894287691 is in state 'finished'
[2025-11-26 03:12:11] 2025-11-26 02:11:23,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:12:11] 2025-11-26 02:11:24,801 | INFO     | time since job start (89877s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:26,482 | INFO     | monitor loop #6059: job 0:6894287691 is in state 'finished'
[2025-11-26 03:12:11] 2025-11-26 02:11:26,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:12:11] 2025-11-26 02:11:26,809 | INFO     | time since job start (89879s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:28,818 | INFO     | time since job start (89881s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:28,991 | INFO     | monitor loop #6060: job 0:6894287691 is in state 'finished'
[2025-11-26 03:12:11] 2025-11-26 02:11:28,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:12:11] 2025-11-26 02:11:30,829 | INFO     | time since job start (89883s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:31,499 | INFO     | monitor loop #6061: job 0:6894287691 is in state 'finished'
[2025-11-26 03:12:11] 2025-11-26 02:11:31,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:12:11] 2025-11-26 02:11:32,840 | INFO     | time since job start (89885s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,006 | INFO     | monitor loop #6062: job 0:6894287691 is in state 'finished'
[2025-11-26 03:12:11] 2025-11-26 02:11:34,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,377 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 03:12:11] 2025-11-26 02:11:34,378 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 03:12:11] 2025-11-26 02:11:34,380 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6894287691/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,380 | INFO     | extracted standard info from prmon json
[2025-11-26 03:12:11] 2025-11-26 02:11:34,381 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:12:11] 2025-11-26 02:11:34,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:12:11] 2025-11-26 02:11:34,408 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:12:11] 2025-11-26 02:11:34,410 | INFO     | sum of square deviations: 970987585590.7887
[2025-11-26 03:12:11] 2025-11-26 02:11:34,528 | INFO     | sum of deviations: 3810896227925.405
[2025-11-26 03:12:11] 2025-11-26 02:11:34,528 | INFO     | mean x: 1764078392.239918
[2025-11-26 03:12:11] 2025-11-26 02:11:34,528 | INFO     | mean y: 2832943.6541353385
[2025-11-26 03:12:11] 2025-11-26 02:11:34,529 | INFO     | intersect: -6920756801.997904
[2025-11-26 03:12:11] 2025-11-26 02:11:34,531 | INFO     | chi2: 30.44840249543196
[2025-11-26 03:12:11] 2025-11-26 02:11:34,533 | INFO     | sum of square deviations: 961066734225.5764
[2025-11-26 03:12:11] 2025-11-26 02:11:34,596 | INFO     | sum of deviations: 4300914990162.476
[2025-11-26 03:12:11] 2025-11-26 02:11:34,596 | INFO     | mean x: 1764078239.7441702
[2025-11-26 03:12:11] 2025-11-26 02:11:34,596 | INFO     | mean y: 2840474.231824417
[2025-11-26 03:12:11] 2025-11-26 02:11:34,596 | INFO     | intersect: -7891669110.733501
[2025-11-26 03:12:11] 2025-11-26 02:11:34,598 | INFO     | chi2: 27.129991838783013
[2025-11-26 03:12:11] 2025-11-26 02:11:34,598 | INFO     | current chi2=27.129991838783013 (change=10.898472119011148 %)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,598 | INFO     | right removable region: 1457
[2025-11-26 03:12:11] 2025-11-26 02:11:34,600 | INFO     | sum of square deviations: 961065627685.5756
[2025-11-26 03:12:11] 2025-11-26 02:11:34,670 | INFO     | sum of deviations: 3181727984701.71
[2025-11-26 03:12:11] 2025-11-26 02:11:34,670 | INFO     | mean x: 1764078544.7441702
[2025-11-26 03:12:11] 2025-11-26 02:11:34,671 | INFO     | mean y: 2842614.170781893
[2025-11-26 03:12:11] 2025-11-26 02:11:34,671 | INFO     | intersect: -5837360085.140296
[2025-11-26 03:12:11] 2025-11-26 02:11:34,672 | INFO     | chi2: 25.36740630225892
[2025-11-26 03:12:11] 2025-11-26 02:11:34,673 | INFO     | current chi2=25.36740630225892 (change=16.68723406403774 %)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,673 | INFO     | left removable region: 10
[2025-11-26 03:12:11] 2025-11-26 02:11:34,675 | INFO     | sum of square deviations: 939477030285.9185
[2025-11-26 03:12:11] 2025-11-26 02:11:34,745 | INFO     | sum of deviations: 3208710885141.612
[2025-11-26 03:12:11] 2025-11-26 02:11:34,745 | INFO     | mean x: 1764078514.2536283
[2025-11-26 03:12:11] 2025-11-26 02:11:34,745 | INFO     | mean y: 2860698.0255701453
[2025-11-26 03:12:11] 2025-11-26 02:11:34,745 | INFO     | intersect: -6022212559.175173
[2025-11-26 03:12:11] 2025-11-26 02:11:34,747 | INFO     | chi2: 17.217551240733254
[2025-11-26 03:12:11] 2025-11-26 02:11:34,747 | INFO     | current memory leak: 3.42 B/s (using 1447 data points, chi2=17.22)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,748 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,748 | INFO     | ..............................
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . Timing measurements:
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . get job = 0 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . initial setup = 14 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . payload setup = 202 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . stage-in = 0 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . payload execution = 89359 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . stage-out = 7 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | . log creation = 1 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,749 | INFO     | ..............................
[2025-11-26 03:12:11] 2025-11-26 02:11:34,852 | INFO     | time since job start (89887s) is within the limit (172800.0s)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,867 | INFO     | 
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | job summary report
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | --------------------------------------------------
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | PanDA job id: 6894287691
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | task id: 47533967
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | errors: (none)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | pilot state: finished 
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | transexitcode: 0
[2025-11-26 03:12:11] 2025-11-26 02:11:34,868 | INFO     | exeerrorcode: 0
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | exeerrordiag: 
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | exitcode: 0
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | exitmsg: OK
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | cpuconsumptiontime: 341466 s
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | nevents: 1000
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | neventsw: 0
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | pid: 1431
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | pgrp: 1431
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | corecount: 8
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | event service: False
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | sizes: {0: 2283425, 1: 2284026, 2: 2284138, 3: 2284337, 13: 2284337, 24: 2284393, 35: 2284549, 46: 2284577, 56: 2284605, 67: 2284633, 78: 2284661, 89: 2284997, 99:
[2025-11-26 03:12:11] 2025-11-26 02:11:34,869 | INFO     | --------------------------------------------------
[2025-11-26 03:12:11] 2025-11-26 02:11:34,870 | INFO     | 
[2025-11-26 03:12:11] 2025-11-26 02:11:34,870 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 03:12:11] 2025-11-26 02:11:34,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:12:11] 2025-11-26 02:11:34,904 | INFO     | job 6894287691 has completed (purged errors)
[2025-11-26 03:12:11] 2025-11-26 02:11:34,905 | INFO     | overall cleanup function is called
[2025-11-26 03:12:11] 2025-11-26 02:11:35,923 | INFO     | --- collectZombieJob: --- 10, [1431]
[2025-11-26 03:12:11] 2025-11-26 02:11:35,923 | INFO     | zombie collector waiting for pid 1431
[2025-11-26 03:12:11] 2025-11-26 02:11:35,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:12:11] 2025-11-26 02:11:35,924 | INFO     | collected zombie processes
[2025-11-26 03:12:11] 2025-11-26 02:11:35,924 | INFO     | will attempt to kill all subprocesses of pid=1431
[2025-11-26 03:12:11] 2025-11-26 02:11:36,061 | INFO     | process IDs to be killed: [1431] (in reverse order)
[2025-11-26 03:12:11] 2025-11-26 02:11:36,120 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:12:11] 2025-11-26 02:11:36,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:12:11] 2025-11-26 02:11:36,125 | INFO     | did not find any defunct processes belonging to 1431
[2025-11-26 03:12:11] 2025-11-26 02:11:36,128 | INFO     | did not find any defunct processes belonging to 1431
[2025-11-26 03:12:11] 2025-11-26 02:11:36,130 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:12:11] 2025-11-26 02:11:36,131 | INFO     | ready for new job
[2025-11-26 03:12:11] 2025-11-26 02:11:36,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:12:11] 2025-11-26 02:11:36,137 | INFO     | ***************************************
[2025-11-26 03:12:11] 2025-11-26 02:11:36,137 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:12:11] 2025-11-26 02:11:36,137 | INFO     | ***************************************
[2025-11-26 03:12:11] 2025-11-26 02:11:36,137 | INFO     | 
[2025-11-26 03:12:11] 2025-11-26 02:11:36,138 | INFO     | pilot is running in a VM
[2025-11-26 03:12:11] 2025-11-26 02:11:36,138 | INFO     | architecture information:
[2025-11-26 03:12:11] 2025-11-26 02:11:36,139 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:12:11] 2025-11-26 02:11:36,359 | INFO     | cat /etc/os-release:
[2025-11-26 03:12:11] NAME="CentOS Linux"
[2025-11-26 03:12:11] VERSION="7 (Core)"
[2025-11-26 03:12:11] ID="centos"
[2025-11-26 03:12:11] ID_LIKE="rhel fedora"
[2025-11-26 03:12:11] VERSION_ID="7"
[2025-11-26 03:12:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:12:11] ANSI_COLOR="0;31"
[2025-11-26 03:12:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:12:11] HOME_URL="https://www.centos.org/"
[2025-11-26 03:12:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:12:11] 
[2025-11-26 03:12:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:12:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:12:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:12:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:12:11] 
[2025-11-26 03:12:11] 2025-11-26 02:11:36,359 | INFO     | ***************************************
[2025-11-26 03:12:11] 2025-11-26 02:11:36,861 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 03:12:11] 2025-11-26 02:11:37,115 | INFO     | sufficient remaining disk space (495565406208 B)
[2025-11-26 03:12:11] 2025-11-26 02:11:37,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:12:11] 2025-11-26 02:11:37,116 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:12:11] 2025-11-26 02:11:37,116 | INFO     | update_server=False
[2025-11-26 03:12:11] 2025-11-26 02:11:37,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:12:11] 2025-11-26 02:11:37,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:12:11] 2025-11-26 02:11:37,533 | INFO     | aborting loop
[2025-11-26 03:12:11] 2025-11-26 02:11:37,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:12:11] 2025-11-26 02:11:37,967 | INFO     | all payload control threads have been joined
[2025-11-26 03:12:11] 2025-11-26 02:11:38,043 | INFO     | all data control threads have been joined
[2025-11-26 03:12:11] 2025-11-26 02:11:38,121 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,384 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,465 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,538 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,615 | INFO     | all job control threads have been joined
[2025-11-26 03:12:11] 2025-11-26 02:11:38,823 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,872 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,973 | INFO     | [payload] control thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:38,977 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,049 | INFO     | [data] control thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,093 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:12:11] 2025-11-26 02:11:39,562 | INFO     | [job] validate thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,621 | INFO     | [job] control thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,867 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:39,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:12:11] 2025-11-26 02:11:40,889 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:11:43,471 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:12:11] 2025-11-26 02:12:02,545 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:12:11] 2025-11-26 02:12:03,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066090571584)>', '<ExcThread(monitor, started 140065502119680)>']
[2025-11-26 03:12:11] 2025-11-26 02:12:08,054 | INFO     | PID=27366 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 03:12:11] 2025-11-26 02:12:08,054 | INFO     | .. there are 9 such processes running
[2025-11-26 03:12:11] 2025-11-26 02:12:08,054 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:12:11] 2025-11-26 02:12:08,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:12:11] 2025-11-26 02:12:08,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:12:11] 2025-11-26 02:12:08,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:12:11] 2025-11-26 02:12:08,055 | INFO     | [monitor] control thread has ended
[2025-11-26 03:12:11] 2025-11-26 02:12:08,258 | INFO     | all workflow threads have been joined
[2025-11-26 03:12:11] 2025-11-26 02:12:08,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:12:11] 2025-11-26 02:12:08,259 | INFO     | traces error code: 0
[2025-11-26 03:12:11] 2025-11-26 02:12:08,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:12:11] 2025-11-26 02:12:08,434 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:12:11] 2025-11-26 02:12:08,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:12:11] 2025-11-26 02:12:08,512 [wrapper] pilotpid: 27366
[2025-11-26 03:12:11] 2025-11-26 02:12:08,561 [wrapper] Pilot exit status: 0
[2025-11-26 03:12:11] 2025-11-26 02:12:08,754 [wrapper] pandaids: 6894287691
[2025-11-26 03:12:11] 2025-11-26 02:12:09,285 [wrapper] cleanup supervisor_pilot 24339 27367
[2025-11-26 03:12:11] 2025-11-26 02:12:09,293 [wrapper] Test setup, not cleaning
[2025-11-26 03:12:11] 2025-11-26 02:12:09,301 [wrapper] apfmon messages muted
[2025-11-26 03:12:11] 2025-11-26 02:12:09,314 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:12:11] 2025-11-26 02:12:09,324 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:12:11]  *** Error codes and diagnostics ***
[2025-11-26 03:12:11]     "exeErrorCode": 0,
[2025-11-26 03:12:11]     "exeErrorDiag": "",
[2025-11-26 03:12:11]     "pilotErrorCode": 0,
[2025-11-26 03:12:11]     "pilotErrorDiag": "",
[2025-11-26 03:12:11]  *** Listing of results directory ***
[2025-11-26 03:12:11] total 1332084
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc    576529 Nov 21 11:50 pilot3.tar.gz
[2025-11-26 03:12:11] -rwx------. 1 boinc boinc     36292 Nov 21 12:00 runpilot2-wrapper.sh
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc      5112 Nov 21 12:00 queuedata.json
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc       100 Nov 25 02:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:12:11] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 02:08 run_atlas
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc       105 Nov 25 02:08 job.xml
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc      6392 Nov 25 02:08 init_data.xml
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc 408720143 Nov 25 02:08 EVNT.47493127._002383.pool.root.1
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:08 start_atlas.sh
[2025-11-26 03:12:11] drwxrwx--x. 2 boinc boinc        68 Nov 25 02:08 shared
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc    590100 Nov 25 02:08 input.tar.gz
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc         0 Nov 25 02:08 boinc_lockfile
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc      2782 Nov 25 02:08 pandaJob.out
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc    991801 Nov 25 02:13 agis_schedconf.cvmfs.json
[2025-11-26 03:12:11] drwx------. 5 boinc boinc      4096 Nov 25 02:13 pilot3
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:44 boinc_task_state.xml
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc 922387164 Nov 26 03:08 HITS.47533967._003541.pool.root.1
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc      1032 Nov 26 03:09 memory_monitor_summary.json
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc   1516240 Nov 26 03:09 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc   2539406 Nov 26 03:09 log.47533967._003541.job.log.tgz.1
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc        95 Nov 26 03:11 pilot_heartbeat.json
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc      8625 Nov 26 03:11 heartbeat.json
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc      8192 Nov 26 03:11 boinc_mmap_file
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc        29 Nov 26 03:11 wrapper_checkpoint.txt
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc      4884 Nov 26 03:12 pilotlog.txt
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc  11984345 Nov 26 03:12 log.47533967._003541.job.log.1
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc       353 Nov 26 03:12 output.list
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc       620 Nov 26 03:12 runtime_log
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc  14540800 Nov 26 03:12 result.tar.gz
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc      8817 Nov 26 03:12 runtime_log.err
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc       662 Nov 26 03:12 JdUMDmo3dg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqXHKDmVWpDkn.diag
[2025-11-26 03:12:11] -rw-r--r--. 1 boinc boinc     21430 Nov 26 03:12 stderr.txt
[2025-11-26 03:12:11] HITS file was successfully produced:
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc 922387164 Nov 26 03:08 shared/HITS.pool.root.1
[2025-11-26 03:12:11]  *** Contents of shared directory: ***
[2025-11-26 03:12:11] total 1314712
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc 408720143 Nov 25 02:08 ATLAS.root_0
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:08 start_atlas.sh
[2025-11-26 03:12:11] -rw-r--r--. 2 boinc boinc    590100 Nov 25 02:08 input.tar.gz
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc 922387164 Nov 26 03:08 HITS.pool.root.1
[2025-11-26 03:12:11] -rw-------. 1 boinc boinc  14540800 Nov 26 03:12 result.tar.gz
03:12:13 (23648): run_atlas exited; CPU time 341945.671349
03:12:13 (23648): called boinc_finish(0)

</stderr_txt>
]]>

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