Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:49:30 (1113053): wrapper (7.7.26015): starting
23:49:30 (1113053): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 23:49:30] Arguments: --nthreads 8
[2025-11-23 23:49:30] Threads: 8
[2025-11-23 23:49:30] Checking for CVMFS
[2025-11-23 23:49:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 23:49:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 23:49:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 23:49:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 23:49:31] 2.13.3.0 9358 25016 327084 153233 1 128 30154259 32935936 21030 16776704 0 135286487 99.795 70642124 33479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 23:49:31] CVMFS is ok
[2025-11-23 23:49:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 23:49:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 23:49:31] Further information can be found at the LHC@home message board.
[2025-11-23 23:49:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 23:49:31] Checking for apptainer binary...
[2025-11-23 23:49:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 23:49:31] Running /usr/bin/apptainer --version
[2025-11-23 23:49:31] apptainer version 1.4.4-1.el9
[2025-11-23 23:49:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 23:49:31] c-6-6.aglt2.org
[2025-11-23 23:49:31] apptainer works
[2025-11-23 23:49:31] Set ATHENA_PROC_NUMBER=8
[2025-11-23 23:49:31] Set ATHENA_CORE_NUMBER=8
[2025-11-23 23:49:31] Starting ATLAS job with PandaID=6894288719
[2025-11-23 23:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:50:36]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:50:36] 2025-11-25 05:49:29,883 | INFO     | sum of square deviations: 995016561960.159
[2025-11-25 00:50:36] 2025-11-25 05:49:29,887 | INFO     | monitor loop #5429: job 0:6894288719 is in state 'finished'
[2025-11-25 00:50:36] 2025-11-25 05:49:29,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:50:36] 2025-11-25 05:49:29,941 | INFO     | sum of deviations: 4158129595242.439
[2025-11-25 00:50:36] 2025-11-25 05:49:29,941 | INFO     | mean x: 1764004780.48
[2025-11-25 00:50:36] 2025-11-25 05:49:29,941 | INFO     | mean y: 2931199.4894915256
[2025-11-25 00:50:36] 2025-11-25 05:49:29,941 | INFO     | intersect: -7368765679.01606
[2025-11-25 00:50:36] 2025-11-25 05:49:29,943 | INFO     | chi2: 8.636087363942378
[2025-11-25 00:50:36] 2025-11-25 05:49:29,945 | INFO     | sum of square deviations: 984932117741.6714
[2025-11-25 00:50:36] 2025-11-25 05:49:30,000 | INFO     | sum of deviations: 4671018879112.697
[2025-11-25 00:50:36] 2025-11-25 05:49:30,001 | INFO     | mean x: 1764004627.985034
[2025-11-25 00:50:36] 2025-11-25 05:49:30,001 | INFO     | mean y: 2938954.9408163265
[2025-11-25 00:50:36] 2025-11-25 05:49:30,001 | INFO     | intersect: -8362814147.976452
[2025-11-25 00:50:36] 2025-11-25 05:49:30,003 | INFO     | chi2: 5.367688369281032
[2025-11-25 00:50:36] 2025-11-25 05:49:30,003 | INFO     | current chi2=5.367688369281032 (change=37.84583060504521 %)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,005 | INFO     | sum of square deviations: 974916046898.1058
[2025-11-25 00:50:36] 2025-11-25 05:49:30,059 | INFO     | sum of deviations: 5038092155053.083
[2025-11-25 00:50:36] 2025-11-25 05:49:30,060 | INFO     | mean x: 1764004475.4901023
[2025-11-25 00:50:36] 2025-11-25 05:49:30,060 | INFO     | mean y: 2944539.694880546
[2025-11-25 00:50:36] 2025-11-25 05:49:30,060 | INFO     | intersect: -9112934861.122969
[2025-11-25 00:50:36] 2025-11-25 05:49:30,062 | INFO     | chi2: 3.3358590451884718
[2025-11-25 00:50:36] 2025-11-25 05:49:30,062 | INFO     | current chi2=3.3358590451884718 (change=37.85296731681744 %)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,064 | INFO     | sum of square deviations: 964968116866.9668
[2025-11-25 00:50:36] 2025-11-25 05:49:30,119 | INFO     | sum of deviations: 5206762199369.568
[2025-11-25 00:50:36] 2025-11-25 05:49:30,119 | INFO     | mean x: 1764004322.9952054
[2025-11-25 00:50:36] 2025-11-25 05:49:30,120 | INFO     | mean y: 2947124.937671233
[2025-11-25 00:50:36] 2025-11-25 05:49:30,120 | INFO     | intersect: -9515244064.960655
[2025-11-25 00:50:36] 2025-11-25 05:49:30,122 | INFO     | chi2: 2.844285723132344
[2025-11-25 00:50:36] 2025-11-25 05:49:30,122 | INFO     | current chi2=2.844285723132344 (change=14.736033968975883 %)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,122 | INFO     | right removable region: 1459
[2025-11-25 00:50:36] 2025-11-25 05:49:30,124 | INFO     | sum of square deviations: 984930875844.6399
[2025-11-25 00:50:36] 2025-11-25 05:49:30,178 | INFO     | sum of deviations: 3747079170050.381
[2025-11-25 00:50:36] 2025-11-25 05:49:30,179 | INFO     | mean x: 1764004932.9843538
[2025-11-25 00:50:36] 2025-11-25 05:49:30,179 | INFO     | mean y: 2937409.494557823
[2025-11-25 00:50:36] 2025-11-25 05:49:30,179 | INFO     | intersect: -6708057546.962073
[2025-11-25 00:50:36] 2025-11-25 05:49:30,181 | INFO     | chi2: 6.4038174649958455
[2025-11-25 00:50:36] 2025-11-25 05:49:30,181 | INFO     | current chi2=6.4038174649958455 (change=25.848162540211966 %)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,183 | INFO     | sum of square deviations: 974913832241.9907
[2025-11-25 00:50:36] 2025-11-25 05:49:30,236 | INFO     | sum of deviations: 3658120394773.876
[2025-11-25 00:50:36] 2025-11-25 05:49:30,237 | INFO     | mean x: 1764005085.4866893
[2025-11-25 00:50:36] 2025-11-25 05:49:30,237 | INFO     | mean y: 2938763.5064846417
[2025-11-25 00:50:36] 2025-11-25 05:49:30,237 | INFO     | intersect: -6616049260.146829
[2025-11-25 00:50:36] 2025-11-25 05:49:30,239 | INFO     | chi2: 6.375441697499182
[2025-11-25 00:50:36] 2025-11-25 05:49:30,239 | INFO     | current chi2=6.375441697499182 (change=0.4431070631192883 %)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,239 | INFO     | left removable region: 20
[2025-11-25 00:50:36] 2025-11-25 05:49:30,241 | INFO     | sum of square deviations: 923921574549.6733
[2025-11-25 00:50:36] 2025-11-25 05:49:30,293 | INFO     | sum of deviations: 4594670453800.175
[2025-11-25 00:50:36] 2025-11-25 05:49:30,294 | INFO     | mean x: 1764004902.5072968
[2025-11-25 00:50:36] 2025-11-25 05:49:30,294 | INFO     | mean y: 2957453.983321751
[2025-11-25 00:50:36] 2025-11-25 05:49:30,294 | INFO     | intersect: -8769455085.316223
[2025-11-25 00:50:36] 2025-11-25 05:49:30,296 | INFO     | chi2: 0.4786578205684935
[2025-11-25 00:50:36] 2025-11-25 05:49:30,296 | INFO     | current memory leak: 4.97 B/s (using 1439 data points, chi2=0.48)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,297 | INFO     | could have reported an average CPU frequency of 2600 MHz (52 samples)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | ..............................
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . Timing measurements:
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . get job = 0 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . initial setup = 3 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . payload setup = 8 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . stage-in = 0 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . payload execution = 89938 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,298 | INFO     | . stage-out = 5 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,299 | INFO     | . log creation = 1 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,299 | INFO     | ..............................
[2025-11-25 00:50:36] 2025-11-25 05:49:30,407 | INFO     | 
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | job summary report
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | --------------------------------------------------
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | PanDA job id: 6894288719
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | task id: 47533967
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | errors: (none)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | pilot state: finished 
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | transexitcode: 0
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | exeerrorcode: 0
[2025-11-25 00:50:36] 2025-11-25 05:49:30,408 | INFO     | exeerrordiag: 
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | exitcode: 0
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | exitmsg: OK
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | cpuconsumptiontime: 297181 s
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | nevents: 1000
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | neventsw: 0
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | pid: 1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | pgrp: 1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | corecount: 8
[2025-11-25 00:50:36] 2025-11-25 05:49:30,409 | INFO     | event service: False
[2025-11-25 00:50:36] 2025-11-25 05:49:30,410 | INFO     | sizes: {0: 2298636, 1: 2298835, 8: 2299097, 12: 2299125, 89952: 2364848, 89957: 2374633, 89959: 2374817, 89966: 2375063}
[2025-11-25 00:50:36] 2025-11-25 05:49:30,410 | INFO     | --------------------------------------------------
[2025-11-25 00:50:36] 2025-11-25 05:49:30,410 | INFO     | 
[2025-11-25 00:50:36] 2025-11-25 05:49:30,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 00:50:36] 2025-11-25 05:49:30,433 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:50:36] 2025-11-25 05:49:30,436 | INFO     | job 6894288719 has completed (purged errors)
[2025-11-25 00:50:36] 2025-11-25 05:49:30,436 | INFO     | overall cleanup function is called
[2025-11-25 00:50:36] 2025-11-25 05:49:31,453 | INFO     | --- collectZombieJob: --- 10, [1125117]
[2025-11-25 00:50:36] 2025-11-25 05:49:31,453 | INFO     | zombie collector waiting for pid 1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:31,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:50:36] 2025-11-25 05:49:31,453 | INFO     | collected zombie processes
[2025-11-25 00:50:36] 2025-11-25 05:49:31,453 | INFO     | will attempt to kill all subprocesses of pid=1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:31,931 | INFO     | process IDs to be killed: [1125117] (in reverse order)
[2025-11-25 00:50:36] 2025-11-25 05:49:32,077 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:50:36] 2025-11-25 05:49:32,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:50:36] 2025-11-25 05:49:32,093 | INFO     | did not find any defunct processes belonging to 1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:32,113 | INFO     | did not find any defunct processes belonging to 1125117
[2025-11-25 00:50:36] 2025-11-25 05:49:32,115 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:50:36] 2025-11-25 05:49:32,115 | INFO     | ready for new job
[2025-11-25 00:50:36] 2025-11-25 05:49:32,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:50:36] 2025-11-25 05:49:32,122 | INFO     | ***************************************
[2025-11-25 00:50:36] 2025-11-25 05:49:32,122 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:50:36] 2025-11-25 05:49:32,122 | INFO     | ***************************************
[2025-11-25 00:50:36] 2025-11-25 05:49:32,122 | INFO     | 
[2025-11-25 00:50:36] 2025-11-25 05:49:32,124 | INFO     | architecture information:
[2025-11-25 00:50:36] 2025-11-25 05:49:32,125 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:50:36] 2025-11-25 05:49:32,145 | INFO     | cat /etc/os-release:
[2025-11-25 00:50:36] NAME="CentOS Linux"
[2025-11-25 00:50:36] VERSION="7 (Core)"
[2025-11-25 00:50:36] ID="centos"
[2025-11-25 00:50:36] ID_LIKE="rhel fedora"
[2025-11-25 00:50:36] VERSION_ID="7"
[2025-11-25 00:50:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:50:36] ANSI_COLOR="0;31"
[2025-11-25 00:50:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:50:36] HOME_URL="https://www.centos.org/"
[2025-11-25 00:50:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:50:36] 
[2025-11-25 00:50:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:50:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:50:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:50:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:50:36] 
[2025-11-25 00:50:36] 2025-11-25 05:49:32,146 | INFO     | ***************************************
[2025-11-25 00:50:36] 2025-11-25 05:49:32,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 00:50:36] 2025-11-25 05:49:32,667 | INFO     | sufficient remaining disk space (71816970240 B)
[2025-11-25 00:50:36] 2025-11-25 05:49:32,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:50:36] 2025-11-25 05:49:32,667 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:50:36] 2025-11-25 05:49:32,667 | INFO     | update_server=False
[2025-11-25 00:50:36] 2025-11-25 05:49:32,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:50:36] 2025-11-25 05:49:32,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:50:36] 2025-11-25 05:49:32,862 | INFO     | all job control threads have been joined
[2025-11-25 00:50:36] 2025-11-25 05:49:32,868 | INFO     | all data control threads have been joined
[2025-11-25 00:50:36] 2025-11-25 05:49:33,010 | INFO     | all payload control threads have been joined
[2025-11-25 00:50:36] 2025-11-25 05:49:33,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:50:36] 2025-11-25 05:49:33,397 | INFO     | aborting loop
[2025-11-25 00:50:36] 2025-11-25 05:49:33,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:50:36] 2025-11-25 05:49:33,677 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:33,720 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:33,867 | INFO     | [job] control thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:33,874 | INFO     | [data] control thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,017 | INFO     | [payload] control thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,051 | INFO     | [job] validate thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,190 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,310 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,405 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,560 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,675 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,731 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:34,930 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:35,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:50:36] 2025-11-25 05:49:36,430 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:37,653 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:50:36] 2025-11-25 05:49:56,540 [wrapper] supervise_pilot (15 min periods counter: 101)
[2025-11-25 00:50:36] 2025-11-25 05:50:03,421 | INFO     | PID=1117073 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 00:50:36] 2025-11-25 05:50:03,422 | INFO     | .. there are 44 such processes running
[2025-11-25 00:50:36] 2025-11-25 05:50:03,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:50:36] 2025-11-25 05:50:03,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:50:36] 2025-11-25 05:50:03,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:50:36] 2025-11-25 05:50:28,746 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:50:36] 2025-11-25 05:50:30,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200166065984)>', '<ExcThread(monitor, started 140199535306496)>']
[2025-11-25 00:50:36] 2025-11-25 05:50:31,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:50:36] 2025-11-25 05:50:31,604 | INFO     | [monitor] control thread has ended
[2025-11-25 00:50:36] 2025-11-25 05:50:35,623 | INFO     | all workflow threads have been joined
[2025-11-25 00:50:36] 2025-11-25 05:50:35,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:50:36] 2025-11-25 05:50:35,623 | INFO     | traces error code: 0
[2025-11-25 00:50:36] 2025-11-25 05:50:35,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:50:36] 2025-11-25 05:50:35,772 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:50:36] 2025-11-25 05:50:35,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:50:36] 2025-11-25 05:50:35,779 [wrapper] pilotpid: 1117073
[2025-11-25 00:50:36] 2025-11-25 05:50:35,782 [wrapper] Pilot exit status: 0
[2025-11-25 00:50:36] 2025-11-25 05:50:35,795 [wrapper] pandaids: 6894288719
[2025-11-25 00:50:36] 2025-11-25 05:50:35,920 [wrapper] cleanup supervisor_pilot 1556961 1117074
[2025-11-25 00:50:36] 2025-11-25 05:50:35,923 [wrapper] Test setup, not cleaning
[2025-11-25 00:50:36] 2025-11-25 05:50:35,926 [wrapper] apfmon messages muted
[2025-11-25 00:50:36] 2025-11-25 05:50:35,929 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:50:36] 2025-11-25 05:50:35,932 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:50:36]  *** Error codes and diagnostics ***
[2025-11-25 00:50:36]     "exeErrorCode": 0,
[2025-11-25 00:50:36]     "exeErrorDiag": "",
[2025-11-25 00:50:36]     "pilotErrorCode": 0,
[2025-11-25 00:50:36]     "pilotErrorDiag": "",
[2025-11-25 00:50:36]  *** Listing of results directory ***
[2025-11-25 00:50:36] total 1327408
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:50 pilot3.tar.gz
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 06:10 queuedata.json
[2025-11-25 00:50:36] -rwx------. 1 boincer umatlas     36292 Nov 21 06:10 runpilot2-wrapper.sh
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas       100 Nov 23 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:50:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 23:49 run_atlas
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas       105 Nov 23 23:49 job.xml
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas 410993975 Nov 23 23:49 EVNT.47493127._002391.pool.root.1
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 23:49 start_atlas.sh
[2025-11-25 00:50:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 23:49 shared
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas    590108 Nov 23 23:49 input.tar.gz
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas         0 Nov 23 23:49 boinc_lockfile
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 23:49 pandaJob.out
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas        57 Nov 23 23:49 setup.sh.local
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas    989786 Nov 23 23:49 agis_schedconf.cvmfs.json
[2025-11-25 00:50:36] drwx------. 5 boincer umatlas      4096 Nov 23 23:49 pilot3
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas       533 Nov 25 00:28 boinc_task_state.xml
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas      6659 Nov 25 00:45 init_data.xml
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas 916708072 Nov 25 00:48 HITS.47533967._003628.pool.root.1
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas      1071 Nov 25 00:49 memory_monitor_summary.json
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas   1516227 Nov 25 00:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas   2477418 Nov 25 00:49 log.47533967._003628.job.log.tgz.1
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas      8614 Nov 25 00:49 heartbeat.json
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas        95 Nov 25 00:50 pilot_heartbeat.json
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas      4825 Nov 25 00:50 pilotlog.txt
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas        29 Nov 25 00:50 wrapper_checkpoint.txt
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas  11343334 Nov 25 00:50 log.47533967._003628.job.log.1
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 00:50 boinc_mmap_file
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas       353 Nov 25 00:50 output.list
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas       620 Nov 25 00:50 runtime_log
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas  13844480 Nov 25 00:50 result.tar.gz
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 00:50 runtime_log.err
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas       658 Nov 25 00:50 EExKDmvCeg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFYHKDmZdcP0n.diag
[2025-11-25 00:50:36] -rw-r--r--. 1 boincer umatlas     21183 Nov 25 00:50 stderr.txt
[2025-11-25 00:50:36] HITS file was successfully produced:
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas 916708072 Nov 25 00:48 shared/HITS.pool.root.1
[2025-11-25 00:50:36]  *** Contents of shared directory: ***
[2025-11-25 00:50:36] total 1310712
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas 410993975 Nov 23 23:49 ATLAS.root_0
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 23:49 start_atlas.sh
[2025-11-25 00:50:36] -rw-r--r--. 2 boincer umatlas    590108 Nov 23 23:49 input.tar.gz
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas 916708072 Nov 25 00:48 HITS.pool.root.1
[2025-11-25 00:50:36] -rw-------. 1 boincer umatlas  13844480 Nov 25 00:50 result.tar.gz
00:50:57 (1113053): run_atlas exited; CPU time 300041.514373
00:50:57 (1113053): called boinc_finish(0)

</stderr_txt>
]]>

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