Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:18 (3313874): wrapper (7.7.26015): starting
00:10:18 (3313874): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:10:18] Arguments: --nthreads 8
[2025-11-23 00:10:18] Threads: 8
[2025-11-23 00:10:18] Checking for CVMFS
[2025-11-23 00:10:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:10:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:10:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:10:23] 2.13.2.0 9388 29087 184000 153197 1 152 36019825 39288832 10779 16776704 0 19680649 99.665 17295712 38881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:10:23] CVMFS is ok
[2025-11-23 00:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:10:23] Further information can be found at the LHC@home message board.
[2025-11-23 00:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:10:23] Checking for apptainer binary...
[2025-11-23 00:10:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:10:23] Running /usr/bin/apptainer --version
[2025-11-23 00:10:24] apptainer version 1.4.4-1.el9
[2025-11-23 00:10:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:10:25] c-210-25.aglt2.org
[2025-11-23 00:10:25] apptainer works
[2025-11-23 00:10:25] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:10:25] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:10:25] Starting ATLAS job with PandaID=6894262093
[2025-11-23 00:10:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:14:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:14:07] 2025-11-25 00:13:11,812 | INFO     | time since job start (154859s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:13,471 | INFO     | monitor loop #9126: job 0:6894262093 is in state 'finished'
[2025-11-24 19:14:07] 2025-11-25 00:13:13,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:14:07] 2025-11-25 00:13:13,819 | INFO     | time since job start (154861s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:15,826 | INFO     | time since job start (154863s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:15,984 | INFO     | monitor loop #9127: job 0:6894262093 is in state 'finished'
[2025-11-24 19:14:07] 2025-11-25 00:13:15,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:14:07] 2025-11-25 00:13:17,833 | INFO     | time since job start (154865s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:18,496 | INFO     | monitor loop #9128: job 0:6894262093 is in state 'finished'
[2025-11-24 19:14:07] 2025-11-25 00:13:18,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:14:07] 2025-11-25 00:13:19,840 | INFO     | time since job start (154867s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:21,005 | INFO     | monitor loop #9129: job 0:6894262093 is in state 'finished'
[2025-11-24 19:14:07] 2025-11-25 00:13:21,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:14:07] 2025-11-25 00:13:21,847 | INFO     | time since job start (154869s) is within the limit (172800.0s)
[2025-11-24 19:14:07] 2025-11-25 00:13:22,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 19:14:07] 2025-11-25 00:13:22,402 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.17145
[2025-11-24 19:14:07] 2025-11-25 00:13:22,421 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894262093/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:14:07] 2025-11-25 00:13:22,422 | INFO     | extracted standard info from prmon json
[2025-11-24 19:14:07] 2025-11-25 00:13:22,422 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:14:07] 2025-11-25 00:13:22,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:14:07] 2025-11-25 00:13:22,502 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:14:07] 2025-11-25 00:13:22,506 | INFO     | sum of square deviations: 5057183160717.02
[2025-11-24 19:14:07] 2025-11-25 00:13:22,669 | INFO     | sum of deviations: 18211017153431.086
[2025-11-24 19:14:07] 2025-11-25 00:13:22,670 | INFO     | mean x: 1763952265.519716
[2025-11-24 19:14:07] 2025-11-25 00:13:22,670 | INFO     | mean y: 2895897.839116719
[2025-11-24 19:14:07] 2025-11-25 00:13:22,670 | INFO     | intersect: -6349131296.813379
[2025-11-24 19:14:07] 2025-11-25 00:13:22,674 | INFO     | chi2: 39.32655541162479
[2025-11-24 19:14:07] 2025-11-25 00:13:22,677 | INFO     | sum of square deviations: 5027332418360.805
[2025-11-24 19:14:07] 2025-11-25 00:13:22,836 | INFO     | sum of deviations: 19048798485698.473
[2025-11-24 19:14:07] 2025-11-25 00:13:22,837 | INFO     | mean x: 1763952113.0296326
[2025-11-24 19:14:07] 2025-11-25 00:13:22,837 | INFO     | mean y: 2900177.0197550375
[2025-11-24 19:14:07] 2025-11-25 00:13:22,837 | INFO     | intersect: -6680797168.476124
[2025-11-24 19:14:07] 2025-11-25 00:13:22,841 | INFO     | chi2: 36.24342431132752
[2025-11-24 19:14:07] 2025-11-25 00:13:22,841 | INFO     | current chi2=36.24342431132752 (change=7.839819857159173 %)
[2025-11-24 19:14:07] 2025-11-25 00:13:22,841 | INFO     | right removable region: 2530
[2025-11-24 19:14:07] 2025-11-25 00:13:22,845 | INFO     | sum of square deviations: 5027324653060.782
[2025-11-24 19:14:07] 2025-11-25 00:13:22,993 | INFO     | sum of deviations: 17162979802131.256
[2025-11-24 19:14:07] 2025-11-25 00:13:22,994 | INFO     | mean x: 1763952418.0296326
[2025-11-24 19:14:07] 2025-11-25 00:13:22,994 | INFO     | mean y: 2901250.7028842354
[2025-11-24 19:14:07] 2025-11-25 00:13:22,994 | INFO     | intersect: -6019124739.62799
[2025-11-24 19:14:07] 2025-11-25 00:13:22,998 | INFO     | chi2: 34.82774508031649
[2025-11-24 19:14:07] 2025-11-25 00:13:22,998 | INFO     | current chi2=34.82774508031649 (change=11.43962466130066 %)
[2025-11-24 19:14:07] 2025-11-25 00:13:22,998 | INFO     | left removable region: 10
[2025-11-24 19:14:07] 2025-11-25 00:13:23,002 | INFO     | sum of square deviations: 4962059620761.508
[2025-11-24 19:14:07] 2025-11-25 00:13:23,166 | INFO     | sum of deviations: 17303040999230.303
[2025-11-24 19:14:07] 2025-11-25 00:13:23,166 | INFO     | mean x: 1763952387.5507936
[2025-11-24 19:14:07] 2025-11-25 00:13:23,166 | INFO     | mean y: 2911302.0912698414
[2025-11-24 19:14:07] 2025-11-25 00:13:23,166 | INFO     | intersect: -6148111219.842378
[2025-11-24 19:14:07] 2025-11-25 00:13:23,170 | INFO     | chi2: 27.572351968060143
[2025-11-24 19:14:07] 2025-11-25 00:13:23,171 | INFO     | current memory leak: 3.49 B/s (using 2520 data points, chi2=27.57)
[2025-11-24 19:14:07] 2025-11-25 00:13:23,173 | INFO     | could have reported an average CPU frequency of 2600 MHz (87 samples)
[2025-11-24 19:14:07] 2025-11-25 00:13:23,173 | INFO     | ..............................
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . Timing measurements:
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . get job = 0 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . initial setup = 14 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . payload setup = 64 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . stage-in = 0 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . payload execution = 154681 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . stage-out = 6 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | . log creation = 1 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,174 | INFO     | ..............................
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | 
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | job summary report
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | --------------------------------------------------
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | PanDA job id: 6894262093
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | task id: 47533967
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | errors: (none)
[2025-11-24 19:14:07] 2025-11-25 00:13:23,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | pilot state: finished 
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | transexitcode: 0
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | exeerrorcode: 0
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | exeerrordiag: 
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | exitcode: 0
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | exitmsg: OK
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | cpuconsumptiontime: 313323 s
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | nevents: 1000
[2025-11-24 19:14:07] 2025-11-25 00:13:23,453 | INFO     | neventsw: 0
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | pid: 3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | pgrp: 3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | corecount: 8
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | event service: False
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | sizes: {0: 2297978, 1: 2298579, 2: 2298663, 3: 2298691, 4: 2298719, 6: 2299074, 18: 2299074, 30: 2299102, 40: 2299130, 46: 2299420, 52: 2299448, 154747: 2396090, 1
[2025-11-24 19:14:07] 2025-11-25 00:13:23,454 | INFO     | --------------------------------------------------
[2025-11-24 19:14:07] 2025-11-25 00:13:23,455 | INFO     | 
[2025-11-24 19:14:07] 2025-11-25 00:13:23,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 19:14:07] 2025-11-25 00:13:23,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:14:07] 2025-11-25 00:13:23,481 | INFO     | job 6894262093 has completed (purged errors)
[2025-11-24 19:14:07] 2025-11-25 00:13:23,481 | INFO     | overall cleanup function is called
[2025-11-24 19:14:07] 2025-11-25 00:13:24,503 | INFO     | --- collectZombieJob: --- 10, [3328401]
[2025-11-24 19:14:07] 2025-11-25 00:13:24,503 | INFO     | zombie collector waiting for pid 3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:24,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:14:07] 2025-11-25 00:13:24,503 | INFO     | collected zombie processes
[2025-11-24 19:14:07] 2025-11-25 00:13:24,503 | INFO     | will attempt to kill all subprocesses of pid=3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:25,118 | INFO     | process IDs to be killed: [3328401] (in reverse order)
[2025-11-24 19:14:07] 2025-11-25 00:13:25,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:14:07] 2025-11-25 00:13:25,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:14:07] 2025-11-25 00:13:25,261 | INFO     | did not find any defunct processes belonging to 3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:25,269 | INFO     | did not find any defunct processes belonging to 3328401
[2025-11-24 19:14:07] 2025-11-25 00:13:25,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:14:07] 2025-11-25 00:13:25,271 | INFO     | ready for new job
[2025-11-24 19:14:07] 2025-11-25 00:13:25,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:14:07] 2025-11-25 00:13:25,282 | INFO     | ***************************************
[2025-11-24 19:14:07] 2025-11-25 00:13:25,282 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:14:07] 2025-11-25 00:13:25,282 | INFO     | ***************************************
[2025-11-24 19:14:07] 2025-11-25 00:13:25,282 | INFO     | 
[2025-11-24 19:14:07] 2025-11-25 00:13:25,284 | INFO     | architecture information:
[2025-11-24 19:14:07] 2025-11-25 00:13:25,285 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:14:07] 2025-11-25 00:13:25,320 | INFO     | cat /etc/os-release:
[2025-11-24 19:14:07] NAME="CentOS Linux"
[2025-11-24 19:14:07] VERSION="7 (Core)"
[2025-11-24 19:14:07] ID="centos"
[2025-11-24 19:14:07] ID_LIKE="rhel fedora"
[2025-11-24 19:14:07] VERSION_ID="7"
[2025-11-24 19:14:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:14:07] ANSI_COLOR="0;31"
[2025-11-24 19:14:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:14:07] HOME_URL="https://www.centos.org/"
[2025-11-24 19:14:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:14:07] 
[2025-11-24 19:14:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:14:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:14:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:14:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:14:07] 
[2025-11-24 19:14:07] 2025-11-25 00:13:25,320 | INFO     | ***************************************
[2025-11-24 19:14:07] 2025-11-25 00:13:25,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 19:14:07] 2025-11-25 00:13:25,955 | INFO     | sufficient remaining disk space (50012880896 B)
[2025-11-24 19:14:07] 2025-11-25 00:13:25,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:14:07] 2025-11-25 00:13:25,956 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:14:07] 2025-11-25 00:13:25,956 | INFO     | update_server=False
[2025-11-24 19:14:07] 2025-11-25 00:13:25,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:14:07] 2025-11-25 00:13:26,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:14:07] 2025-11-25 00:13:26,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 19:14:07] 2025-11-25 00:13:26,032 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 19:14:07] 2025-11-25 00:13:26,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:14:07] 2025-11-25 00:13:26,032 | INFO     | will abort loop
[2025-11-24 19:14:07] 2025-11-25 00:13:26,222 | INFO     | all job control threads have been joined
[2025-11-24 19:14:07] 2025-11-25 00:13:26,424 | INFO     | all payload control threads have been joined
[2025-11-24 19:14:07] 2025-11-25 00:13:26,480 | INFO     | all data control threads have been joined
[2025-11-24 19:14:07] 2025-11-25 00:13:26,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:14:07] 2025-11-25 00:13:26,962 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,039 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,081 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,152 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,164 | INFO     | [job] validate thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,228 | INFO     | [job] control thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,430 | INFO     | [payload] control thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,486 | INFO     | [data] control thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:27,490 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:28,050 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:28,160 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:28,271 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:28,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:14:07] 2025-11-25 00:13:28,846 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:29,450 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:30,040 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:36,597 | INFO     | job.realtimelogging is not enabled
[2025-11-24 19:14:07] 2025-11-25 00:13:37,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:14:07] 2025-11-25 00:13:55,525 | INFO     | PID=3318402 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:14:07] 2025-11-25 00:13:55,525 | INFO     | .. there are 7 such processes running
[2025-11-24 19:14:07] 2025-11-25 00:13:55,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:14:07] 2025-11-25 00:13:55,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:14:07] 2025-11-25 00:13:55,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:14:07] 2025-11-25 00:13:59,833 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:14:07] 2025-11-25 00:14:01,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110012782400)>', '<ExcThread(monitor, started 140109668144896)>']
[2025-11-24 19:14:07] 2025-11-25 00:14:02,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:14:07] 2025-11-25 00:14:02,580 | INFO     | [monitor] control thread has ended
[2025-11-24 19:14:07] 2025-11-25 00:14:06,860 | INFO     | all workflow threads have been joined
[2025-11-24 19:14:07] 2025-11-25 00:14:06,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:14:07] 2025-11-25 00:14:06,860 | INFO     | traces error code: 0
[2025-11-24 19:14:07] 2025-11-25 00:14:06,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:14:07] 2025-11-25 00:14:07,091 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:14:07] 2025-11-25 00:14:07,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:14:07] 2025-11-25 00:14:07,099 [wrapper] pilotpid: 3318402
[2025-11-24 19:14:07] 2025-11-25 00:14:07,103 [wrapper] Pilot exit status: 0
[2025-11-24 19:14:07] 2025-11-25 00:14:07,121 [wrapper] pandaids: 6894262093
[2025-11-24 19:14:07] 2025-11-25 00:14:07,212 [wrapper] cleanup supervisor_pilot 2625260 3318403
[2025-11-24 19:14:07] 2025-11-25 00:14:07,259 [wrapper] Test setup, not cleaning
[2025-11-24 19:14:07] 2025-11-25 00:14:07,290 [wrapper] apfmon messages muted
[2025-11-24 19:14:07] 2025-11-25 00:14:07,297 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:14:07] 2025-11-25 00:14:07,312 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:14:07]  *** Error codes and diagnostics ***
[2025-11-24 19:14:07]     "exeErrorCode": 0,
[2025-11-24 19:14:07]     "exeErrorDiag": "",
[2025-11-24 19:14:07]     "pilotErrorCode": 0,
[2025-11-24 19:14:07]     "pilotErrorDiag": "",
[2025-11-24 19:14:07]  *** Listing of results directory ***
[2025-11-24 19:14:07] total 1332024
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 23:12 pilot3.tar.gz
[2025-11-24 19:14:07] -rwx------. 1 boincer umatlas     36292 Nov 20 23:43 runpilot2-wrapper.sh
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 23:43 queuedata.json
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:14:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:10 run_atlas
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:10 job.xml
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas 407791617 Nov 23 00:10 EVNT.47493127._002196.pool.root.1
[2025-11-24 19:14:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:10 shared
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:10 input.tar.gz
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:10 boinc_lockfile
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:10 pandaJob.out
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas        57 Nov 23 00:10 setup.sh.local
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas    989784 Nov 23 00:11 agis_schedconf.cvmfs.json
[2025-11-24 19:14:07] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas       534 Nov 24 18:25 boinc_task_state.xml
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas 907492450 Nov 24 19:12 HITS.47533967._001680.pool.root.1
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas      6662 Nov 24 19:12 init_data.xml
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas      1061 Nov 24 19:12 memory_monitor_summary.json
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:13 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas   3218129 Nov 24 19:13 log.47533967._001680.job.log.tgz.1
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas      8629 Nov 24 19:13 heartbeat.json
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas        95 Nov 24 19:13 pilot_heartbeat.json
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas        30 Nov 24 19:14 wrapper_checkpoint.txt
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas      5081 Nov 24 19:14 pilotlog.txt
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:14 boinc_mmap_file
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas  19179945 Nov 24 19:14 log.47533967._001680.job.log.1
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas       353 Nov 24 19:14 output.list
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:14 runtime_log
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas  22415360 Nov 24 19:14 result.tar.gz
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 19:14 runtime_log.err
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas       663 Nov 24 19:14 7qQKDmXAYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE2IKDm8i4kjn.diag
[2025-11-24 19:14:07] -rw-r--r--. 1 boincer umatlas     21756 Nov 24 19:14 stderr.txt
[2025-11-24 19:14:07] HITS file was successfully produced:
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas 907492450 Nov 24 19:12 shared/HITS.pool.root.1
[2025-11-24 19:14:07]  *** Contents of shared directory: ***
[2025-11-24 19:14:07] total 1306952
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas 407791617 Nov 23 00:10 ATLAS.root_0
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:10 input.tar.gz
[2025-11-24 19:14:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:10 start_atlas.sh
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas 907492450 Nov 24 19:12 HITS.pool.root.1
[2025-11-24 19:14:07] -rw-------. 1 boincer umatlas  22415360 Nov 24 19:14 result.tar.gz
19:14:08 (3313874): run_atlas exited; CPU time 315530.713984
19:14:08 (3313874): called boinc_finish(0)

</stderr_txt>
]]>

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