Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:36:46 (1208864): wrapper (7.7.26015): starting
22:36:46 (1208864): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 22:36:46] Arguments: --nthreads 3
[2025-11-24 22:36:46] Threads: 3
[2025-11-24 22:36:46] Checking for CVMFS
[2025-11-24 22:36:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:36:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:36:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:36:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:36:46] 2.9.2.0 4188978 9014 89540 153259 0 81 34365479 36864001 0 130560 0 3349192 99.837 585579 7928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 22:36:46] CVMFS is ok
[2025-11-24 22:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:36:46] Further information can be found at the LHC@home message board.
[2025-11-24 22:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:36:46] Checking for apptainer binary...
[2025-11-24 22:36:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:36:46] Running /usr/bin/apptainer --version
[2025-11-24 22:36:46] apptainer version 1.4.1-1.1
[2025-11-24 22:36:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:36:46] atlasA228b
[2025-11-24 22:36:46] apptainer works
[2025-11-24 22:36:46] Set ATHENA_PROC_NUMBER=3
[2025-11-24 22:36:46] Set ATHENA_CORE_NUMBER=3
[2025-11-24 22:36:46] Starting ATLAS job with PandaID=6895328889
[2025-11-24 22:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:37:31]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:37:31] 2025-11-25 05:36:33,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:37:31] 2025-11-25 05:36:33,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:37:31] 2025-11-25 05:36:33,651 | INFO     | aborting loop
[2025-11-25 06:37:31] 2025-11-25 05:36:33,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:37:31] 2025-11-25 05:36:33,831 | INFO     | all job control threads have been joined
[2025-11-25 06:37:31] 2025-11-25 05:36:34,163 | INFO     | all payload control threads have been joined
[2025-11-25 06:37:31] 2025-11-25 05:36:34,267 | INFO     | all data control threads have been joined
[2025-11-25 06:37:31] 2025-11-25 05:36:34,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:37:31] 2025-11-25 05:36:34,657 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:34,657 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:34,657 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:34,836 | INFO     | [job] control thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:34,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:37:31] 2025-11-25 05:36:34,938 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,006 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,056 | INFO     | [job] validate thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,062 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,169 | INFO     | [payload] control thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,242 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,272 | INFO     | [data] control thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:35,871 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:36,138 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:36,475 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:38,930 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:43,943 | INFO     | job.realtimelogging is not enabled
[2025-11-25 06:37:31] 2025-11-25 05:36:44,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:37:31] 2025-11-25 05:36:51,923 [wrapper] supervise_pilot (15 min periods counter: 33)
[2025-11-25 06:37:31] 2025-11-25 05:37:03,816 | INFO     | PID=1212584 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 06:37:31] 2025-11-25 05:37:03,816 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:37:31] 2025-11-25 05:37:03,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:37:31] 2025-11-25 05:37:03,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:37:31] 2025-11-25 05:37:25,674 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:37:31] 2025-11-25 05:37:26,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514092914496)>', '<ExcThread(monitor, started 140513437001472)>']
[2025-11-25 06:37:31] 2025-11-25 05:37:26,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:37:31] 2025-11-25 05:37:26,930 | INFO     | [monitor] control thread has ended
[2025-11-25 06:37:31] 2025-11-25 05:37:31,347 | INFO     | all workflow threads have been joined
[2025-11-25 06:37:31] 2025-11-25 05:37:31,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:37:31] 2025-11-25 05:37:31,347 | INFO     | traces error code: 0
[2025-11-25 06:37:31] 2025-11-25 05:37:31,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:37:31] 2025-11-25 05:37:31,401 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:37:31] 2025-11-25 05:37:31,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:37:31] 2025-11-25 05:37:31,406 [wrapper] pilotpid: 1212584
[2025-11-25 06:37:31] 2025-11-25 05:37:31,408 [wrapper] Pilot exit status: 0
[2025-11-25 06:37:31] 2025-11-25 05:37:31,416 [wrapper] pandaids: 6895328889
[2025-11-25 06:37:31] 2025-11-25 05:37:31,435 [wrapper] cleanup supervisor_pilot 1271868 1212585
[2025-11-25 06:37:31] 2025-11-25 05:37:31,438 [wrapper] Test setup, not cleaning
[2025-11-25 06:37:31] 2025-11-25 05:37:31,440 [wrapper] apfmon messages muted
[2025-11-25 06:37:31] 2025-11-25 05:37:31,443 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:37:31] 2025-11-25 05:37:31,446 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:37:31]  *** Error codes and diagnostics ***
[2025-11-25 06:37:31]     "exeErrorCode": 0,
[2025-11-25 06:37:31]     "exeErrorDiag": "",
[2025-11-25 06:37:31]     "pilotErrorCode": 0,
[2025-11-25 06:37:31]     "pilotErrorDiag": "",
[2025-11-25 06:37:31]  *** Listing of results directory ***
[2025-11-25 06:37:31] total 1322464
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc    576529 Nov 21 18:59 pilot3.tar.gz
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      5112 Nov 21 19:04 queuedata.json
[2025-11-25 06:37:31] -rwx------ 1 boinc boinc     36292 Nov 21 19:05 runpilot2-wrapper.sh
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc       100 Nov 24 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:37:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 22:36 run_atlas
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc       105 Nov 24 22:36 job.xml
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc 410826056 Nov 24 22:36 EVNT.47483658._000093.pool.root.1
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc    590097 Nov 24 22:36 input.tar.gz
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:36 start_atlas.sh
[2025-11-25 06:37:31] drwxrwx--x 2 boinc boinc      4096 Nov 24 22:36 shared
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc         0 Nov 24 22:36 boinc_setup_complete
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      6450 Nov 24 22:36 init_data.xml
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc         0 Nov 24 22:36 boinc_lockfile
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      2780 Nov 24 22:36 pandaJob.out
[2025-11-25 06:37:31] -rw------- 1 boinc boinc    991801 Nov 24 22:36 agis_schedconf.cvmfs.json
[2025-11-25 06:37:31] drwx------ 5 boinc boinc      4096 Nov 24 22:36 pilot3
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc       531 Nov 25 06:32 boinc_task_state.xml
[2025-11-25 06:37:31] -rw------- 1 boinc boinc 929049091 Nov 25 06:36 HITS.47556137._000921.pool.root.1
[2025-11-25 06:37:31] -rw------- 1 boinc boinc        95 Nov 25 06:36 pilot_heartbeat.json
[2025-11-25 06:37:31] -rw------- 1 boinc boinc      1022 Nov 25 06:36 memory_monitor_summary.json
[2025-11-25 06:37:31] -rw------- 1 boinc boinc   1516227 Nov 25 06:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:37:31] -rw------- 1 boinc boinc   1159804 Nov 25 06:36 log.47556137._000921.job.log.tgz.1
[2025-11-25 06:37:31] -rw------- 1 boinc boinc      8562 Nov 25 06:36 heartbeat.json
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      8192 Nov 25 06:37 boinc_mmap_file
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc        28 Nov 25 06:37 wrapper_checkpoint.txt
[2025-11-25 06:37:31] -rw------- 1 boinc boinc      4824 Nov 25 06:37 pilotlog.txt
[2025-11-25 06:37:31] -rw------- 1 boinc boinc   4050488 Nov 25 06:37 log.47556137._000921.job.log.1
[2025-11-25 06:37:31] -rw------- 1 boinc boinc       353 Nov 25 06:37 output.list
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc       620 Nov 25 06:37 runtime_log
[2025-11-25 06:37:31] -rw------- 1 boinc boinc   5232640 Nov 25 06:37 result.tar.gz
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      8918 Nov 25 06:37 runtime_log.err
[2025-11-25 06:37:31] -rw------- 1 boinc boinc       669 Nov 25 06:37 TFhLDmygkg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLlHKDmmQanmm.diag
[2025-11-25 06:37:31] -rw-r--r-- 1 boinc boinc      7535 Nov 25 06:37 stderr.txt
[2025-11-25 06:37:31] HITS file was successfully produced:
[2025-11-25 06:37:31] -rw------- 1 boinc boinc 929049091 Nov 25 06:36 shared/HITS.pool.root.1
[2025-11-25 06:37:31]  *** Contents of shared directory: ***
[2025-11-25 06:37:31] total 1314192
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc 410826056 Nov 24 22:36 ATLAS.root_0
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc    590097 Nov 24 22:36 input.tar.gz
[2025-11-25 06:37:31] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:36 start_atlas.sh
[2025-11-25 06:37:31] -rw------- 1 boinc boinc 929049091 Nov 25 06:36 HITS.pool.root.1
[2025-11-25 06:37:31] -rw------- 1 boinc boinc   5232640 Nov 25 06:37 result.tar.gz
06:37:32 (1208864): run_atlas exited; CPU time 84890.782398
06:37:32 (1208864): called boinc_finish(0)

</stderr_txt>
]]>

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