Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:41:28 (28750): wrapper (7.7.26015): starting
23:41:28 (28750): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 23:41:28] Arguments: --nthreads 12
[2025-11-21 23:41:28] Threads: 12
[2025-11-21 23:41:28] Checking for CVMFS
[2025-11-21 23:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:41:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:41:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:41:28] 2.11.2.0 2910 32675 91548 153159 1 81 13713941 20275201 1 130560 0 3359159 99.751 1522454 25906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 23:41:28] CVMFS is ok
[2025-11-21 23:41:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 23:41:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 23:41:28] Further information can be found at the LHC@home message board.
[2025-11-21 23:41:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:41:28] Checking for apptainer binary...
[2025-11-21 23:41:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:41:28] Running /usr/bin/apptainer --version
[2025-11-21 23:41:28] apptainer version 1.3.2-1.el7
[2025-11-21 23:41:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:41:30] c-205-11.aglt2.org
[2025-11-21 23:41:30] apptainer works
[2025-11-21 23:41:30] Set ATHENA_PROC_NUMBER=12
[2025-11-21 23:41:30] Set ATHENA_CORE_NUMBER=12
[2025-11-21 23:41:30] Starting ATLAS job with PandaID=6894287281
[2025-11-21 23:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 06:34:31]  *** The last 200 lines of the pilot log: ***
[2025-11-22 06:34:31] 2025-11-22 11:33:24,918 | INFO     | time since job start (24699s) is within the limit (172800.0s)
[2025-11-22 06:34:31] 2025-11-22 11:33:26,479 | INFO     | monitor loop #1846: job 0:6894287281 is in state 'finished'
[2025-11-22 06:34:31] 2025-11-22 11:33:26,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 06:34:31] 2025-11-22 11:33:26,923 | INFO     | time since job start (24701s) is within the limit (172800.0s)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,272 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 06:34:31] 2025-11-22 11:33:27,277 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-22 06:34:31] 2025-11-22 11:33:27,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894287281/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,280 | INFO     | extracted standard info from prmon json
[2025-11-22 06:34:31] 2025-11-22 11:33:27,280 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 06:34:31] 2025-11-22 11:33:27,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 06:34:31] 2025-11-22 11:33:27,288 | INFO     | fitting pss+swap vs Time
[2025-11-22 06:34:31] 2025-11-22 11:33:27,288 | INFO     | sum of square deviations: 20598710382.06436
[2025-11-22 06:34:31] 2025-11-22 11:33:27,292 | INFO     | sum of deviations: 319841430865.386
[2025-11-22 06:34:31] 2025-11-22 11:33:27,292 | INFO     | mean x: 1763798857.1308641
[2025-11-22 06:34:31] 2025-11-22 11:33:27,292 | INFO     | mean y: 4039730.7851851853
[2025-11-22 06:34:31] 2025-11-22 11:33:27,292 | INFO     | intersect: -27382915071.718887
[2025-11-22 06:34:31] 2025-11-22 11:33:27,293 | INFO     | chi2: 6.765215929990834
[2025-11-22 06:34:31] 2025-11-22 11:33:27,293 | INFO     | sum of square deviations: 19845186836.977486
[2025-11-22 06:34:31] 2025-11-22 11:33:27,297 | INFO     | sum of deviations: 517046947021.14514
[2025-11-22 06:34:31] 2025-11-22 11:33:27,297 | INFO     | mean x: 1763798704.6325
[2025-11-22 06:34:31] 2025-11-22 11:33:27,297 | INFO     | mean y: 4079604.035
[2025-11-22 06:34:31] 2025-11-22 11:33:27,297 | INFO     | intersect: -45949971767.79786
[2025-11-22 06:34:31] 2025-11-22 11:33:27,298 | INFO     | chi2: 3.3296192599039305
[2025-11-22 06:34:31] 2025-11-22 11:33:27,298 | INFO     | current chi2=3.3296192599039305 (change=50.78325223673323 %)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,298 | INFO     | sum of square deviations: 19110268291.8886
[2025-11-22 06:34:31] 2025-11-22 11:33:27,302 | INFO     | sum of deviations: 575411610409.2252
[2025-11-22 06:34:31] 2025-11-22 11:33:27,302 | INFO     | mean x: 1763798552.1341772
[2025-11-22 06:34:31] 2025-11-22 11:33:27,302 | INFO     | mean y: 4091643.524050633
[2025-11-22 06:34:31] 2025-11-22 11:33:27,302 | INFO     | intersect: -53104014941.86428
[2025-11-22 06:34:31] 2025-11-22 11:33:27,302 | INFO     | chi2: 2.7544499573390295
[2025-11-22 06:34:31] 2025-11-22 11:33:27,303 | INFO     | current chi2=2.7544499573390295 (change=17.27432651207983 %)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,303 | INFO     | right removable region: 394
[2025-11-22 06:34:31] 2025-11-22 11:33:27,303 | INFO     | sum of square deviations: 19845154506.97748
[2025-11-22 06:34:31] 2025-11-22 11:33:27,307 | INFO     | sum of deviations: 151223591158.86777
[2025-11-22 06:34:31] 2025-11-22 11:33:27,307 | INFO     | mean x: 1763799009.6325
[2025-11-22 06:34:31] 2025-11-22 11:33:27,307 | INFO     | mean y: 4073759.5025
[2025-11-22 06:34:31] 2025-11-22 11:33:27,307 | INFO     | intersect: -13436386995.050983
[2025-11-22 06:34:31] 2025-11-22 11:33:27,307 | INFO     | chi2: 4.1796332701839205
[2025-11-22 06:34:31] 2025-11-22 11:33:27,308 | INFO     | current chi2=4.1796332701839205 (change=38.21877507774414 %)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,308 | INFO     | sum of square deviations: 19110203631.8886
[2025-11-22 06:34:31] 2025-11-22 11:33:27,311 | INFO     | sum of deviations: 114516640934.48866
[2025-11-22 06:34:31] 2025-11-22 11:33:27,312 | INFO     | mean x: 1763799162.1341772
[2025-11-22 06:34:31] 2025-11-22 11:33:27,312 | INFO     | mean y: 4081365.934177215
[2025-11-22 06:34:31] 2025-11-22 11:33:27,312 | INFO     | intersect: -10565369343.299843
[2025-11-22 06:34:31] 2025-11-22 11:33:27,312 | INFO     | chi2: 4.113982703881381
[2025-11-22 06:34:31] 2025-11-22 11:33:27,312 | INFO     | current chi2=4.113982703881381 (change=1.5707255172569448 %)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,313 | INFO     | left removable region: 20
[2025-11-22 06:34:31] 2025-11-22 11:33:27,313 | INFO     | sum of square deviations: 16221423184.270071
[2025-11-22 06:34:31] 2025-11-22 11:33:27,316 | INFO     | sum of deviations: 331462819189.7673
[2025-11-22 06:34:31] 2025-11-22 11:33:27,316 | INFO     | mean x: 1763799131.6390374
[2025-11-22 06:34:31] 2025-11-22 11:33:27,316 | INFO     | mean y: 4143305.6871657753
[2025-11-22 06:34:31] 2025-11-22 11:33:27,316 | INFO     | intersect: -36036703789.92765
[2025-11-22 06:34:31] 2025-11-22 11:33:27,317 | INFO     | chi2: 0.032289006477776654
[2025-11-22 06:34:31] 2025-11-22 11:33:27,317 | INFO     | current memory leak: 20.43 B/s (using 374 data points, chi2=0.03)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,317 | INFO     | could have reported an average CPU frequency of 2361 MHz (17 samples)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | ..............................
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . Timing measurements:
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . get job = 0 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . initial setup = 2 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . payload setup = 7 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . stage-in = 0 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . payload execution = 24660 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . stage-out = 3 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,318 | INFO     | . log creation = 0 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,319 | INFO     | ..............................
[2025-11-22 06:34:31] 2025-11-22 11:33:27,411 | INFO     | 
[2025-11-22 06:34:31] 2025-11-22 11:33:27,411 | INFO     | job summary report
[2025-11-22 06:34:31] 2025-11-22 11:33:27,411 | INFO     | --------------------------------------------------
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | PanDA job id: 6894287281
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | task id: 47533967
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | errors: (none)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | pilot state: finished 
[2025-11-22 06:34:31] 2025-11-22 11:33:27,412 | INFO     | transexitcode: 0
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | exeerrorcode: 0
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | exeerrordiag: 
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | exitcode: 0
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | exitmsg: OK
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | cpuconsumptiontime: 284297 s
[2025-11-22 06:34:31] 2025-11-22 11:33:27,413 | INFO     | nevents: 1000
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | neventsw: 0
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | pid: 6640
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | pgrp: 6640
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | corecount: 12
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | event service: False
[2025-11-22 06:34:31] 2025-11-22 11:33:27,414 | INFO     | sizes: {0: 2298629, 1: 2298828, 5: 2299090, 11: 2299146, 24671: 2335548, 24672: 2335547, 24675: 2344725, 24678: 2344781, 24686: 2345091}
[2025-11-22 06:34:31] 2025-11-22 11:33:27,415 | INFO     | --------------------------------------------------
[2025-11-22 06:34:31] 2025-11-22 11:33:27,415 | INFO     | 
[2025-11-22 06:34:31] 2025-11-22 11:33:27,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 06:34:31] 2025-11-22 11:33:27,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 06:34:31] 2025-11-22 11:33:27,445 | INFO     | job 6894287281 has completed (purged errors)
[2025-11-22 06:34:31] 2025-11-22 11:33:27,445 | INFO     | overall cleanup function is called
[2025-11-22 06:34:31] 2025-11-22 11:33:28,461 | INFO     | --- collectZombieJob: --- 10, [6640]
[2025-11-22 06:34:31] 2025-11-22 11:33:28,462 | INFO     | zombie collector waiting for pid 6640
[2025-11-22 06:34:31] 2025-11-22 11:33:28,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 06:34:31] 2025-11-22 11:33:28,462 | INFO     | collected zombie processes
[2025-11-22 06:34:31] 2025-11-22 11:33:28,462 | INFO     | will attempt to kill all subprocesses of pid=6640
[2025-11-22 06:34:31] 2025-11-22 11:33:28,551 | INFO     | process IDs to be killed: [6640] (in reverse order)
[2025-11-22 06:34:31] 2025-11-22 11:33:28,608 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 06:34:31] 2025-11-22 11:33:28,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 06:34:31] 2025-11-22 11:33:28,612 | INFO     | did not find any defunct processes belonging to 6640
[2025-11-22 06:34:31] 2025-11-22 11:33:28,616 | INFO     | did not find any defunct processes belonging to 6640
[2025-11-22 06:34:31] 2025-11-22 11:33:28,618 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 06:34:31] 2025-11-22 11:33:28,618 | INFO     | ready for new job
[2025-11-22 06:34:31] 2025-11-22 11:33:28,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 06:34:31] 2025-11-22 11:33:28,620 | INFO     | ***************************************
[2025-11-22 06:34:31] 2025-11-22 11:33:28,621 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 06:34:31] 2025-11-22 11:33:28,621 | INFO     | ***************************************
[2025-11-22 06:34:31] 2025-11-22 11:33:28,621 | INFO     | 
[2025-11-22 06:34:31] 2025-11-22 11:33:28,621 | INFO     | architecture information:
[2025-11-22 06:34:31] 2025-11-22 11:33:28,622 | INFO     | executing command: cat /etc/os-release
[2025-11-22 06:34:31] 2025-11-22 11:33:28,641 | INFO     | cat /etc/os-release:
[2025-11-22 06:34:31] NAME="CentOS Linux"
[2025-11-22 06:34:31] VERSION="7 (Core)"
[2025-11-22 06:34:31] ID="centos"
[2025-11-22 06:34:31] ID_LIKE="rhel fedora"
[2025-11-22 06:34:31] VERSION_ID="7"
[2025-11-22 06:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 06:34:31] ANSI_COLOR="0;31"
[2025-11-22 06:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 06:34:31] HOME_URL="https://www.centos.org/"
[2025-11-22 06:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 06:34:31] 
[2025-11-22 06:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 06:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 06:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 06:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 06:34:31] 
[2025-11-22 06:34:31] 2025-11-22 11:33:28,641 | INFO     | ***************************************
[2025-11-22 06:34:31] 2025-11-22 11:33:29,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 06:34:31] 2025-11-22 11:33:29,162 | INFO     | sufficient remaining disk space (28288483328 B)
[2025-11-22 06:34:31] 2025-11-22 11:33:29,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 06:34:31] 2025-11-22 11:33:29,163 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 06:34:31] 2025-11-22 11:33:29,163 | INFO     | update_server=False
[2025-11-22 06:34:31] 2025-11-22 11:33:29,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 06:34:31] 2025-11-22 11:33:29,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:34:31] 2025-11-22 11:33:29,892 | INFO     | all data control threads have been joined
[2025-11-22 06:34:31] 2025-11-22 11:33:29,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:34:31] 2025-11-22 11:33:29,988 | INFO     | aborting loop
[2025-11-22 06:34:31] 2025-11-22 11:33:30,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 06:34:31] 2025-11-22 11:33:30,169 | INFO     | [job] retrieve thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,169 | INFO     | [job] queue monitor thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,297 | INFO     | all payload control threads have been joined
[2025-11-22 06:34:31] 2025-11-22 11:33:30,407 | INFO     | [payload] failed_post thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,440 | INFO     | [payload] validate_post thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 06:34:31] 2025-11-22 11:33:30,555 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,695 | INFO     | all job control threads have been joined
[2025-11-22 06:34:31] 2025-11-22 11:33:30,764 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,900 | INFO     | [data] control thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:30,993 | INFO     | [job] job monitor thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,303 | INFO     | [payload] control thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,356 | INFO     | [data] copytool_in thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,447 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,553 | INFO     | [job] validate thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:31,700 | INFO     | [job] control thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:32,118 | INFO     | [data] copytool_out thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:33:34,473 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 06:34:31] 2025-11-22 11:34:00,132 | INFO     | PID=32420 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 06:34:31] 2025-11-22 11:34:00,133 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 06:34:31] 2025-11-22 11:34:00,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 06:34:31] 2025-11-22 11:34:00,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 06:34:31] 2025-11-22 11:34:25,670 | INFO     | [monitor] cgroup control has ended
[2025-11-22 06:34:31] 2025-11-22 11:34:25,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687877207872)>', '<ExcThread(monitor, started 139687133951744)>']
[2025-11-22 06:34:31] 2025-11-22 11:34:26,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 06:34:31] 2025-11-22 11:34:26,266 | INFO     | [monitor] control thread has ended
[2025-11-22 06:34:31] 2025-11-22 11:34:30,809 | INFO     | all workflow threads have been joined
[2025-11-22 06:34:31] 2025-11-22 11:34:30,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 06:34:31] 2025-11-22 11:34:30,809 | INFO     | traces error code: 0
[2025-11-22 06:34:31] 2025-11-22 11:34:30,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 06:34:31] 2025-11-22 11:34:30,915 [wrapper] ==== pilot stdout END ====
[2025-11-22 06:34:31] 2025-11-22 11:34:30,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 06:34:31] 2025-11-22 11:34:30,924 [wrapper] pilotpid: 32420
[2025-11-22 06:34:31] 2025-11-22 11:34:30,927 [wrapper] Pilot exit status: 0
[2025-11-22 06:34:31] 2025-11-22 11:34:30,942 [wrapper] pandaids: 6894287281
[2025-11-22 06:34:31] 2025-11-22 11:34:30,987 [wrapper] cleanup supervisor_pilot 22742 32421
[2025-11-22 06:34:31] 2025-11-22 11:34:30,991 [wrapper] Test setup, not cleaning
[2025-11-22 06:34:31] 2025-11-22 11:34:30,995 [wrapper] apfmon messages muted
[2025-11-22 06:34:31] 2025-11-22 11:34:30,999 [wrapper] ==== wrapper stdout END ====
[2025-11-22 06:34:31] 2025-11-22 11:34:31,003 [wrapper] ==== wrapper stderr END ====
[2025-11-22 06:34:31]  *** Error codes and diagnostics ***
[2025-11-22 06:34:31]     "exeErrorCode": 0,
[2025-11-22 06:34:31]     "exeErrorDiag": "",
[2025-11-22 06:34:31]     "pilotErrorCode": 0,
[2025-11-22 06:34:31]     "pilotErrorDiag": "",
[2025-11-22 06:34:31]  *** Listing of results directory ***
[2025-11-22 06:34:31] total 1309120
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 05:34 pilot3.tar.gz
[2025-11-22 06:34:31] -rwx------ 1 boincer umatlas     36292 Nov 21 05:42 runpilot2-wrapper.sh
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 05:42 queuedata.json
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas       100 Nov 21 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 06:34:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 23:41 run_atlas
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas       105 Nov 21 23:41 job.xml
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas 409944595 Nov 21 23:41 EVNT.47493127._002376.pool.root.1
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:41 start_atlas.sh
[2025-11-22 06:34:31] drwxrwx--x 2 boincer umatlas      4096 Nov 21 23:41 shared
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 23:41 input.tar.gz
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas         0 Nov 21 23:41 boinc_lockfile
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas      2782 Nov 21 23:41 pandaJob.out
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas    989752 Nov 21 23:41 agis_schedconf.cvmfs.json
[2025-11-22 06:34:31] drwx------ 5 boincer umatlas      4096 Nov 21 23:41 pilot3
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas       532 Nov 22 06:24 boinc_task_state.xml
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas      5870 Nov 22 06:30 init_data.xml
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas 915467979 Nov 22 06:32 HITS.47533967._003471.pool.root.1
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas      1060 Nov 22 06:33 memory_monitor_summary.json
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas   1526164 Nov 22 06:33 agis_ddmendpoints.agis.ALL.json
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas   2154786 Nov 22 06:33 log.47533967._003471.job.log.tgz.1
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas      8665 Nov 22 06:33 heartbeat.json
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas        95 Nov 22 06:34 pilot_heartbeat.json
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 06:34 boinc_mmap_file
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas        29 Nov 22 06:34 wrapper_checkpoint.txt
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas      4746 Nov 22 06:34 pilotlog.txt
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas   3446081 Nov 22 06:34 log.47533967._003471.job.log.1
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas       353 Nov 22 06:34 output.list
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas       620 Nov 22 06:34 runtime_log
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas   5621760 Nov 22 06:34 result.tar.gz
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas       669 Nov 22 06:34 ZtpMDmrldg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPIJKDm4gds3n.diag
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas      8820 Nov 22 06:34 runtime_log.err
[2025-11-22 06:34:31] -rw-r--r-- 1 boincer umatlas     21323 Nov 22 06:34 stderr.txt
[2025-11-22 06:34:31] HITS file was successfully produced:
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas 915467979 Nov 22 06:32 shared/HITS.pool.root.1
[2025-11-22 06:34:31]  *** Contents of shared directory: ***
[2025-11-22 06:34:31] total 1300444
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas 409944595 Nov 21 23:41 ATLAS.root_0
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:41 start_atlas.sh
[2025-11-22 06:34:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 23:41 input.tar.gz
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas 915467979 Nov 22 06:32 HITS.pool.root.1
[2025-11-22 06:34:31] -rw------- 1 boincer umatlas   5621760 Nov 22 06:34 result.tar.gz
06:34:32 (28750): run_atlas exited; CPU time 280164.550375
06:34:32 (28750): called boinc_finish(0)

</stderr_txt>
]]>

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