Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 16:37:55 (1599101): vboxwrapper version 26210
2025-11-22 16:37:55 (1599101): BOINC client version: 7.18.1
2025-11-22 16:37:58 (1599101): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-22 16:37:58 (1599101): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 16:37:58 (1599101): Create VM. (boinc_a01bf755ef6e17ab, slot#8)
2025-11-22 16:37:58 (1599101): Setting Memory Size for VM. (4600MB)
2025-11-22 16:37:58 (1599101): Setting CPU Count for VM. (6)
2025-11-22 16:37:58 (1599101): Setting Chipset Options for VM.
2025-11-22 16:37:58 (1599101): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 16:37:58 (1599101): Setting Boot Options for VM.
2025-11-22 16:37:58 (1599101): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 16:37:58 (1599101): Enabling VM Network Access.
2025-11-22 16:37:58 (1599101): Disabling USB Support for VM.
2025-11-22 16:37:58 (1599101): Disabling COM Port Support for VM.
2025-11-22 16:37:58 (1599101): Disabling LPT Port Support for VM.
2025-11-22 16:37:59 (1599101): Disabling Audio Support for VM.
2025-11-22 16:37:59 (1599101): Disabling Clipboard Support for VM.
2025-11-22 16:37:59 (1599101): Disabling Drag and Drop Support for VM.
2025-11-22 16:37:59 (1599101): Adding storage controller(s) to VM.
2025-11-22 16:37:59 (1599101): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 16:37:59 (1599101): Adding VirtualBox Guest Additions to VM.
2025-11-22 16:37:59 (1599101): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 16:37:59 (1599101): forwarding host port 40015 to guest port 80
2025-11-22 16:37:59 (1599101): Enabling remote desktop for VM.
2025-11-22 16:37:59 (1599101): Required extension pack not installed, remote desktop not enabled.
2025-11-22 16:37:59 (1599101): Enabling shared directory for VM.
2025-11-22 16:37:59 (1599101): Starting VM using VBoxManage interface. (boinc_a01bf755ef6e17ab, slot#8)
2025-11-22 16:38:00 (1599101): Successfully started VM. (PID = '1599600')
2025-11-22 16:38:00 (1599101): Reporting VM Process ID to BOINC.
2025-11-22 16:38:00 (1599101): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-22 16:38:00 (1599101): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 16:38:00 (1599101): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 16:38:00 (1599101): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 16:38:00 (1599101): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 16:38:00 (1599101): Detected: Web Application Enabled (http://localhost:40015)
2025-11-22 16:38:00 (1599101): Preference change detected
2025-11-22 16:38:00 (1599101): Setting CPU throttle for VM. (90%)
2025-11-22 16:38:00 (1599101): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 16:38:02 (1599101): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 16:38:02 (1599101): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 16:38:04 (1599101): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 16:38:04 (1599101): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 16:38:04 (1599101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 16:38:12 (1599101): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 16:38:12 (1599101): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-22 16:38:17 (1599101): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000134 main     Log opened 2025-11-22T14:38:15.058059000Z
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000261 main     OS Product: Linux
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000296 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000323 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000349 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000350 main     Process ID: 1335
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.000350 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 16:38:17 (1599101): Guest Log: 00:00:00.001157 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 16:38:17 (1599101): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 16:38:17 (1599101): Guest Log: [INFO] Mounting shared directory
2025-11-22 16:38:17 (1599101): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 16:38:20 (1599101): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 16:38:20 (1599101): Guest Log: [INFO] Detected branch: prod
2025-11-22 16:38:20 (1599101): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 16:38:20 (1599101): Guest Log: Copying input files
2025-11-22 16:38:22 (1599101): Guest Log: Copied input files into RunAtlas.
2025-11-22 16:38:22 (1599101): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-11-22 16:38:30 (1599101): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 16:38:30 (1599101): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 16:38:30 (1599101): Guest Log: 2.6.3.0 1610 0 29580 153174 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-11-22 16:38:31 (1599101): Guest Log: copied the webapp to /var/www
2025-11-22 16:38:31 (1599101): Guest Log: ATHENA_PROC_NUMBER=6
2025-11-22 16:38:31 (1599101): Guest Log: ATHENA_CORE_NUMBER=6
2025-11-22 16:38:31 (1599101): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 16:38:31 (1599101): Guest Log:  *** Starting ATLAS job. (PandaID=6894287268 taskID=47533967) ***
2025-11-22 18:17:01 (1599101): Status Report: Elapsed Time: '6000.000000'
2025-11-22 18:17:01 (1599101): Status Report: CPU Time: '30006.090000'
2025-11-22 19:56:01 (1599101): Status Report: Elapsed Time: '12000.000000'
2025-11-22 19:56:01 (1599101): Status Report: CPU Time: '62218.840000'
2025-11-22 21:35:02 (1599101): Status Report: Elapsed Time: '18000.000000'
2025-11-22 21:35:02 (1599101): Status Report: CPU Time: '94519.950000'
2025-11-22 23:14:02 (1599101): Status Report: Elapsed Time: '24000.000000'
2025-11-22 23:14:02 (1599101): Status Report: CPU Time: '126823.160000'
2025-11-23 00:53:02 (1599101): Status Report: Elapsed Time: '30000.000000'
2025-11-23 00:53:02 (1599101): Status Report: CPU Time: '159133.750000'
2025-11-23 02:32:03 (1599101): Status Report: Elapsed Time: '36000.000000'
2025-11-23 02:32:03 (1599101): Status Report: CPU Time: '191447.920000'
2025-11-23 02:49:31 (1599101): Guest Log:  *** Job finished ***
2025-11-23 02:49:31 (1599101): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:48:48,308 | INFO     | [job] control thread has finished
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:48:50,443 | INFO     | [data] queue_monitor thread has finished
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:40,271 | INFO     | [monitor] cgroup control has ended
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:42,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891153020736)>', '<ExcThread(monitor, started 139889895008000)>']
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:42,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:42,901 | INFO     | [monitor] control thread has ended
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,367 | INFO     | all workflow threads have been joined
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,368 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,368 | INFO     | traces error code: 0
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,511 [wrapper] ==== pilot stdout END ====
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,516 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,520 [wrapper] pilotpid: 6015
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,525 [wrapper] Pilot exit status: 0
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,541 [wrapper] pandaids: 6894287268
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,574 [wrapper] cleanup supervisor_pilot 14993 6016
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,580 [wrapper] Test setup, not cleaning
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,585 [wrapper] apfmon messages muted
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,590 [wrapper] ==== wrapper stdout END ====
2025-11-23 02:49:31 (1599101): Guest Log: 2025-11-23 00:49:47,594 [wrapper] ==== wrapper stderr END ====
2025-11-23 02:49:31 (1599101): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 02:49:31 (1599101): Guest Log:     "exeErrorCode": 0,
2025-11-23 02:49:31 (1599101): Guest Log:     "exeErrorDiag": "",
2025-11-23 02:49:31 (1599101): Guest Log:     "pilotErrorCode": 0,
2025-11-23 02:49:31 (1599101): Guest Log:     "pilotErrorDiag": "",
2025-11-23 02:49:31 (1599101): Guest Log:  *** Listing of results directory ***
2025-11-23 02:49:31 (1599101): Guest Log: total 919672
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 10:34 pilot3.tar.gz
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 10:37 queuedata.json
2025-11-23 02:49:31 (1599101): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 10:38 runpilot2-wrapper.sh
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 22 14:38 start_atlas.sh
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas      7493 Nov 22 14:38 init_data.xml
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas    590103 Nov 22 14:38 input.tar.gz
2025-11-23 02:49:31 (1599101): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 14:38 EVNT.47493127._002374.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 22 14:38 pandaJob.out
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas        69 Nov 22 14:38 setup.sh.local
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas    989768 Nov 22 14:38 agis_schedconf.cvmfs.json
2025-11-23 02:49:31 (1599101): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 14:39 pilot3
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 00:47 pilot_heartbeat.json
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas 925291325 Nov 23 00:48 HITS.47533967._003458.pool.root.1
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 23 00:48 memory_monitor_summary.json
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 00:48 agis_ddmendpoints.agis.ALL.json
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas   1630316 Nov 23 00:48 log.47533967._003458.job.log.tgz.1
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas      8678 Nov 23 00:48 heartbeat.json
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 23 00:49 pilotlog.txt
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas   4668873 Nov 23 00:49 log.47533967._003458.job.log.1
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 00:49 output.list
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 00:49 runtime_log
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas   6318080 Nov 23 00:49 result.tar.gz
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 atlas atlas      9388 Nov 23 00:49 runtime_log.err
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas       681 Nov 23 00:49 MUfNDmuhdg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKIJKDmeLrrvm.diag
2025-11-23 02:49:31 (1599101): Guest Log: Looking for outputfile HITS.47533967._003458.pool.root.1
2025-11-23 02:49:31 (1599101): Guest Log: HITS file was successfully produced
2025-11-23 02:49:31 (1599101): Guest Log: -rw-------. 1 atlas atlas 925291325 Nov 23 00:48 /home/atlas/RunAtlas/HITS.47533967._003458.pool.root.1
2025-11-23 02:49:31 (1599101): Guest Log: Successfully finished the ATLAS job!
2025-11-23 02:49:31 (1599101): Guest Log: Copying the results back to the shared directory!
2025-11-23 02:49:31 (1599101): Guest Log:  *** Contents of shared directory: ***
2025-11-23 02:49:31 (1599101): Guest Log: total 402350
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 root root 411148156 Nov 22 14:37 ATLAS.root_0
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 root root      7493 Nov 22 14:37 init_data.xml
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 root root    590103 Nov 22 14:37 input.tar.gz
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 root root   6318080 Nov 23 00:49 result.tar.gz
2025-11-23 02:49:31 (1599101): Guest Log: -rw-r--r--. 1 root root     15847 Nov 22 14:37 start_atlas.sh
2025-11-23 02:49:31 (1599101): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 02:49:31 (1599101): VM Completion File Detected.
2025-11-23 02:49:31 (1599101): Powering off VM.
2025-11-23 02:49:32 (1599101): Successfully stopped VM.
2025-11-23 02:49:32 (1599101): Deregistering VM. (boinc_a01bf755ef6e17ab, slot#8)
2025-11-23 02:49:32 (1599101): Removing network bandwidth throttle group from VM.
2025-11-23 02:49:32 (1599101): Removing VM from VirtualBox.
2025-11-23 02:49:37 (1599101): called boinc_finish(0)

</stderr_txt>
]]>

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