Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:37:44 (28881): wrapper (7.7.26015): starting
00:37:44 (28881): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:37:44] Arguments: --nthreads 8
[2025-11-25 00:37:44] Threads: 8
[2025-11-25 00:37:44] Checking for CVMFS
[2025-11-25 00:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:37:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:37:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:37:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:37:47] 2.11.2.0 20077 283164 142052 153263 2 85 19661336 25165824 4632 130560 10 135829269 99.873 76861084 2638 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 00:37:47] CVMFS is ok
[2025-11-25 00:37:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:37:47] Checking for apptainer binary...
[2025-11-25 00:37:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:37:47] Running /usr/bin/apptainer --version
[2025-11-25 00:37:47] apptainer version 1.3.2-1.el7
[2025-11-25 00:37:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:38:08] cg-vwn315.simple-grid.lan
[2025-11-25 00:38:08] apptainer works
[2025-11-25 00:38:08] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:38:08] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:38:08] Starting ATLAS job with PandaID=6894252264
[2025-11-25 00:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:43:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:43:46] 2025-11-26 00:43:02,908 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:43:46] 2025-11-26 00:43:02,910 | INFO     | sum of square deviations: 980973694579.9608
[2025-11-26 01:43:46] 2025-11-26 00:43:02,974 | INFO     | sum of deviations: 4842291216456.894
[2025-11-26 01:43:46] 2025-11-26 00:43:02,974 | INFO     | mean x: 1764072991.7895095
[2025-11-26 01:43:46] 2025-11-26 00:43:02,974 | INFO     | mean y: 2850016.1096730246
[2025-11-26 01:43:46] 2025-11-26 00:43:02,974 | INFO     | intersect: -8704983028.270592
[2025-11-26 01:43:46] 2025-11-26 00:43:02,976 | INFO     | chi2: 17.55058845515619
[2025-11-26 01:43:46] 2025-11-26 00:43:02,978 | INFO     | sum of square deviations: 970984819521.6134
[2025-11-26 01:43:46] 2025-11-26 00:43:03,045 | INFO     | sum of deviations: 5347074188557.024
[2025-11-26 01:43:46] 2025-11-26 00:43:03,045 | INFO     | mean x: 1764072839.2939167
[2025-11-26 01:43:46] 2025-11-26 00:43:03,046 | INFO     | mean y: 2857722.4859876963
[2025-11-26 01:43:46] 2025-11-26 00:43:03,046 | INFO     | intersect: -9711638483.922564
[2025-11-26 01:43:46] 2025-11-26 00:43:03,051 | INFO     | chi2: 14.289674647502753
[2025-11-26 01:43:46] 2025-11-26 00:43:03,051 | INFO     | current chi2=14.289674647502753 (change=18.580082462678984 %)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,051 | INFO     | right removable region: 1462
[2025-11-26 01:43:46] 2025-11-26 00:43:03,053 | INFO     | sum of square deviations: 970983664791.614
[2025-11-26 01:43:46] 2025-11-26 00:43:03,123 | INFO     | sum of deviations: 4206066691272.6113
[2025-11-26 01:43:46] 2025-11-26 00:43:03,123 | INFO     | mean x: 1764073144.2939167
[2025-11-26 01:43:46] 2025-11-26 00:43:03,123 | INFO     | mean y: 2859728.4962406014
[2025-11-26 01:43:46] 2025-11-26 00:43:03,123 | INFO     | intersect: -7638679014.357457
[2025-11-26 01:43:46] 2025-11-26 00:43:03,125 | INFO     | chi2: 12.41794850894595
[2025-11-26 01:43:46] 2025-11-26 00:43:03,125 | INFO     | current chi2=12.41794850894595 (change=29.24483107403913 %)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,127 | INFO     | sum of square deviations: 961061682790.7155
[2025-11-26 01:43:46] 2025-11-26 00:43:03,188 | INFO     | sum of deviations: 3625100886304.7944
[2025-11-26 01:43:46] 2025-11-26 00:43:03,188 | INFO     | mean x: 1764073296.798354
[2025-11-26 01:43:46] 2025-11-26 00:43:03,188 | INFO     | mean y: 2868657.492455418
[2025-11-26 01:43:46] 2025-11-26 00:43:03,188 | INFO     | intersect: -6651172166.5687
[2025-11-26 01:43:46] 2025-11-26 00:43:03,190 | INFO     | chi2: 8.267570088706345
[2025-11-26 01:43:46] 2025-11-26 00:43:03,191 | INFO     | current chi2=8.267570088706345 (change=33.422416087888045 %)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,193 | INFO     | sum of square deviations: 951207516014.7585
[2025-11-26 01:43:46] 2025-11-26 00:43:03,255 | INFO     | sum of deviations: 3144429773574.519
[2025-11-26 01:43:46] 2025-11-26 00:43:03,256 | INFO     | mean x: 1764073449.3028216
[2025-11-26 01:43:46] 2025-11-26 00:43:03,256 | INFO     | mean y: 2876095.5306262905
[2025-11-26 01:43:46] 2025-11-26 00:43:03,256 | INFO     | intersect: -5828664323.746325
[2025-11-26 01:43:46] 2025-11-26 00:43:03,258 | INFO     | chi2: 5.525376898443459
[2025-11-26 01:43:46] 2025-11-26 00:43:03,258 | INFO     | current chi2=5.525376898443459 (change=33.1680670480045 %)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,260 | INFO     | sum of square deviations: 941421286071.6898
[2025-11-26 01:43:46] 2025-11-26 00:43:03,328 | INFO     | sum of deviations: 2963847314445.42
[2025-11-26 01:43:46] 2025-11-26 00:43:03,329 | INFO     | mean x: 1764073601.804558
[2025-11-26 01:43:46] 2025-11-26 00:43:03,329 | INFO     | mean y: 2878906.906077348
[2025-11-26 01:43:46] 2025-11-26 00:43:03,329 | INFO     | intersect: -5550899071.717565
[2025-11-26 01:43:46] 2025-11-26 00:43:03,331 | INFO     | chi2: 5.108969906880504
[2025-11-26 01:43:46] 2025-11-26 00:43:03,331 | INFO     | current chi2=5.108969906880504 (change=7.536264027169979 %)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,331 | INFO     | left removable region: 40
[2025-11-26 01:43:46] 2025-11-26 00:43:03,333 | INFO     | sum of square deviations: 891615337831.9717
[2025-11-26 01:43:46] 2025-11-26 00:43:03,391 | INFO     | sum of deviations: 3161624575115.511
[2025-11-26 01:43:46] 2025-11-26 00:43:03,391 | INFO     | mean x: 1764074028.80872
[2025-11-26 01:43:46] 2025-11-26 00:43:03,392 | INFO     | mean y: 2893314.7812939524
[2025-11-26 01:43:46] 2025-11-26 00:43:03,392 | INFO     | intersect: -6252427298.440087
[2025-11-26 01:43:46] 2025-11-26 00:43:03,393 | INFO     | chi2: 1.407655891988937
[2025-11-26 01:43:46] 2025-11-26 00:43:03,394 | INFO     | current memory leak: 3.55 B/s (using 1422 data points, chi2=1.41)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,395 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | ..............................
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . Timing measurements:
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . get job = 0 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . initial setup = 4 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . payload setup = 158 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . stage-in = 0 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . payload execution = 89686 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . stage-out = 3 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,396 | INFO     | . log creation = 1 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,397 | INFO     | ..............................
[2025-11-26 01:43:46] 2025-11-26 00:43:03,514 | INFO     | 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,514 | INFO     | job summary report
[2025-11-26 01:43:46] 2025-11-26 00:43:03,514 | INFO     | --------------------------------------------------
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | PanDA job id: 6894252264
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | task id: 47533967
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | errors: (none)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | pilot state: finished 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | transexitcode: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | exeerrorcode: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | exeerrordiag: 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | exitcode: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | exitmsg: OK
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | cpuconsumptiontime: 337020 s
[2025-11-26 01:43:46] 2025-11-26 00:43:03,515 | INFO     | nevents: 1000
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | neventsw: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | pid: 7003
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | pgrp: 7003
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | corecount: 8
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | event service: False
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | sizes: {0: 2284132, 1: 2284331, 12: 2284331, 22: 2284359, 33: 2284387, 44: 2284443, 55: 2284599, 66: 2284627, 77: 2284655, 87: 2284711, 98: 2285309, 109: 2285309, 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | --------------------------------------------------
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | 
[2025-11-26 01:43:46] 2025-11-26 00:43:03,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:43:46] 2025-11-26 00:43:03,576 | INFO     | job 6894252264 has completed (purged errors)
[2025-11-26 01:43:46] 2025-11-26 00:43:03,576 | INFO     | overall cleanup function is called
[2025-11-26 01:43:46] 2025-11-26 00:43:04,594 | INFO     | --- collectZombieJob: --- 10, [7003]
[2025-11-26 01:43:46] 2025-11-26 00:43:04,594 | INFO     | zombie collector waiting for pid 7003
[2025-11-26 01:43:46] 2025-11-26 00:43:04,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:43:46] 2025-11-26 00:43:04,595 | INFO     | collected zombie processes
[2025-11-26 01:43:46] 2025-11-26 00:43:04,595 | INFO     | will attempt to kill all subprocesses of pid=7003
[2025-11-26 01:43:46] 2025-11-26 00:43:04,697 | INFO     | process IDs to be killed: [7003] (in reverse order)
[2025-11-26 01:43:46] 2025-11-26 00:43:04,839 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:43:46] 2025-11-26 00:43:04,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:43:46] 2025-11-26 00:43:04,843 | INFO     | did not find any defunct processes belonging to 7003
[2025-11-26 01:43:46] 2025-11-26 00:43:04,846 | INFO     | did not find any defunct processes belonging to 7003
[2025-11-26 01:43:46] 2025-11-26 00:43:04,860 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:43:46] 2025-11-26 00:43:04,861 | INFO     | ready for new job
[2025-11-26 01:43:46] 2025-11-26 00:43:04,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:43:46] 2025-11-26 00:43:04,867 | INFO     | ***************************************
[2025-11-26 01:43:46] 2025-11-26 00:43:04,867 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:43:46] 2025-11-26 00:43:04,867 | INFO     | ***************************************
[2025-11-26 01:43:46] 2025-11-26 00:43:04,868 | INFO     | 
[2025-11-26 01:43:46] 2025-11-26 00:43:04,868 | INFO     | pilot is running in a VM
[2025-11-26 01:43:46] 2025-11-26 00:43:04,868 | INFO     | architecture information:
[2025-11-26 01:43:46] 2025-11-26 00:43:04,870 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:43:46] 2025-11-26 00:43:04,963 | INFO     | cat /etc/os-release:
[2025-11-26 01:43:46] NAME="CentOS Linux"
[2025-11-26 01:43:46] VERSION="7 (Core)"
[2025-11-26 01:43:46] ID="centos"
[2025-11-26 01:43:46] ID_LIKE="rhel fedora"
[2025-11-26 01:43:46] VERSION_ID="7"
[2025-11-26 01:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:43:46] ANSI_COLOR="0;31"
[2025-11-26 01:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:43:46] HOME_URL="https://www.centos.org/"
[2025-11-26 01:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:43:46] 
[2025-11-26 01:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:43:46] 
[2025-11-26 01:43:46] 2025-11-26 00:43:04,964 | INFO     | ***************************************
[2025-11-26 01:43:46] 2025-11-26 00:43:05,468 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-11-26 01:43:46] 2025-11-26 00:43:05,592 | INFO     | sufficient remaining disk space (495800287232 B)
[2025-11-26 01:43:46] 2025-11-26 00:43:05,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:43:46] 2025-11-26 00:43:05,592 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:43:46] 2025-11-26 00:43:05,592 | INFO     | update_server=False
[2025-11-26 01:43:46] 2025-11-26 00:43:05,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:43:46] 2025-11-26 00:43:05,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:43:46] 2025-11-26 00:43:05,779 | INFO     | aborting loop
[2025-11-26 01:43:46] 2025-11-26 00:43:05,843 | INFO     | all data control threads have been joined
[2025-11-26 01:43:46] 2025-11-26 00:43:06,598 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,644 | INFO     | all job control threads have been joined
[2025-11-26 01:43:46] 2025-11-26 00:43:06,714 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,780 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,785 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,849 | INFO     | [data] control thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:06,945 | INFO     | all payload control threads have been joined
[2025-11-26 01:43:46] 2025-11-26 00:43:07,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:43:46] 2025-11-26 00:43:07,068 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,073 [wrapper] supervise_pilot (15 min periods counter: 101)
[2025-11-26 01:43:46] 2025-11-26 00:43:07,161 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,262 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,336 | INFO     | [job] validate thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,650 | INFO     | [job] control thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,788 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:07,950 | INFO     | [payload] control thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:08,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:43:46] 2025-11-26 00:43:08,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:43:46] 2025-11-26 00:43:09,043 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:09,533 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:12,406 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:43:46] 2025-11-26 00:43:35,451 | INFO     | PID=32689 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 01:43:46] 2025-11-26 00:43:35,451 | INFO     | .. there are 9 such processes running
[2025-11-26 01:43:46] 2025-11-26 00:43:35,451 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:43:46] 2025-11-26 00:43:35,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:43:46] 2025-11-26 00:43:35,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:43:46] 2025-11-26 00:43:39,931 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:43:46] 2025-11-26 00:43:40,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686606325568)>', '<ExcThread(monitor, started 140685940352768)>']
[2025-11-26 01:43:46] 2025-11-26 00:43:40,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:43:46] 2025-11-26 00:43:40,481 | INFO     | [monitor] control thread has ended
[2025-11-26 01:43:46] 2025-11-26 00:43:45,357 | INFO     | all workflow threads have been joined
[2025-11-26 01:43:46] 2025-11-26 00:43:45,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:43:46] 2025-11-26 00:43:45,357 | INFO     | traces error code: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:45,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:43:46] 2025-11-26 00:43:45,536 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:43:46] 2025-11-26 00:43:45,547 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:43:46] 2025-11-26 00:43:45,557 [wrapper] pilotpid: 32689
[2025-11-26 01:43:46] 2025-11-26 00:43:45,572 [wrapper] Pilot exit status: 0
[2025-11-26 01:43:46] 2025-11-26 00:43:45,673 [wrapper] pandaids: 6894252264
[2025-11-26 01:43:46] 2025-11-26 00:43:45,719 [wrapper] cleanup supervisor_pilot 27787 32690
[2025-11-26 01:43:46] 2025-11-26 00:43:45,789 [wrapper] Test setup, not cleaning
[2025-11-26 01:43:46] 2025-11-26 00:43:45,800 [wrapper] apfmon messages muted
[2025-11-26 01:43:46] 2025-11-26 00:43:45,804 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:43:46] 2025-11-26 00:43:45,810 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:43:46]  *** Error codes and diagnostics ***
[2025-11-26 01:43:46]     "exeErrorCode": 0,
[2025-11-26 01:43:46]     "exeErrorDiag": "",
[2025-11-26 01:43:46]     "pilotErrorCode": 0,
[2025-11-26 01:43:46]     "pilotErrorDiag": "",
[2025-11-26 01:43:46]  *** Listing of results directory ***
[2025-11-26 01:43:46] total 1320332
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc    576529 Nov 21 02:54 pilot3.tar.gz
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc      5112 Nov 21 02:57 queuedata.json
[2025-11-26 01:43:46] -rwx------. 1 boinc boinc     36292 Nov 21 02:58 runpilot2-wrapper.sh
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:43:46] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:37 run_atlas
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:37 job.xml
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc      6391 Nov 25 00:37 init_data.xml
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc 409964747 Nov 25 00:37 EVNT.47493127._002110.pool.root.1
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:37 start_atlas.sh
[2025-11-26 01:43:46] drwxrwx--x. 2 boinc boinc        68 Nov 25 00:37 shared
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc    590102 Nov 25 00:37 input.tar.gz
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:37 boinc_lockfile
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc      2782 Nov 25 00:38 pandaJob.out
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc    991801 Nov 25 00:41 agis_schedconf.cvmfs.json
[2025-11-26 01:43:46] drwx------. 5 boinc boinc      4096 Nov 25 00:42 pilot3
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc       533 Nov 26 01:28 boinc_task_state.xml
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc 909115585 Nov 26 01:42 HITS.47533967._000811.pool.root.1
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc        95 Nov 26 01:42 pilot_heartbeat.json
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc      1030 Nov 26 01:42 memory_monitor_summary.json
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc   1516240 Nov 26 01:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc   2542552 Nov 26 01:42 log.47533967._000811.job.log.tgz.1
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc      8625 Nov 26 01:43 heartbeat.json
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc      8192 Nov 26 01:43 boinc_mmap_file
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc        29 Nov 26 01:43 wrapper_checkpoint.txt
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc      4885 Nov 26 01:43 pilotlog.txt
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc  11973460 Nov 26 01:43 log.47533967._000811.job.log.1
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc       353 Nov 26 01:43 output.list
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc       620 Nov 26 01:43 runtime_log
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc  14530560 Nov 26 01:43 result.tar.gz
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc       662 Nov 26 01:43 vnoKDm5aVg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsFHKDmIWKsPo.diag
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc      8833 Nov 26 01:43 runtime_log.err
[2025-11-26 01:43:46] -rw-r--r--. 1 boinc boinc     20812 Nov 26 01:43 stderr.txt
[2025-11-26 01:43:46] HITS file was successfully produced:
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc 909115585 Nov 26 01:42 shared/HITS.pool.root.1
[2025-11-26 01:43:46]  *** Contents of shared directory: ***
[2025-11-26 01:43:46] total 1302960
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc 409964747 Nov 25 00:37 ATLAS.root_0
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:37 start_atlas.sh
[2025-11-26 01:43:46] -rw-r--r--. 2 boinc boinc    590102 Nov 25 00:37 input.tar.gz
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc 909115585 Nov 26 01:42 HITS.pool.root.1
[2025-11-26 01:43:46] -rw-------. 1 boinc boinc  14530560 Nov 26 01:43 result.tar.gz
01:43:47 (28881): run_atlas exited; CPU time 337569.483177
01:43:47 (28881): called boinc_finish(0)

</stderr_txt>
]]>

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