Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:35 (16786): wrapper (7.7.26015): starting
23:21:35 (16786): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:21:35] Arguments: --nthreads 8
[2025-11-21 23:21:35] Threads: 8
[2025-11-21 23:21:35] Checking for CVMFS
[2025-11-21 23:21:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:21:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:21:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:21:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:21:35] 2.11.2.0 4697 111418 133200 153159 3 49 15443765 18432001 1885 130560 0 78815737 99.973 4777017 32085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 23:21:35] CVMFS is ok
[2025-11-21 23:21:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 23:21:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 23:21:35] Further information can be found at the LHC@home message board.
[2025-11-21 23:21:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:21:35] Checking for apptainer binary...
[2025-11-21 23:21:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:21:35] Running /usr/bin/apptainer --version
[2025-11-21 23:21:35] apptainer version 1.3.2-1.el7
[2025-11-21 23:21:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:21:36] c-206-21.aglt2.org
[2025-11-21 23:21:36] apptainer works
[2025-11-21 23:21:36] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:21:36] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:21:36] Starting ATLAS job with PandaID=6894286259
[2025-11-21 23:21:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:00:49]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:00:49] 2025-11-23 00:00:08,346 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894286259/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,346 | INFO     | extracted standard info from prmon json
[2025-11-22 19:00:49] 2025-11-23 00:00:08,346 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:00:49] 2025-11-23 00:00:08,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:00:49] 2025-11-23 00:00:08,361 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:00:49] 2025-11-23 00:00:08,363 | INFO     | sum of square deviations: 482754718490.61804
[2025-11-22 19:00:49] 2025-11-23 00:00:08,387 | INFO     | sum of deviations: 2005913263577.2178
[2025-11-22 19:00:49] 2025-11-23 00:00:08,387 | INFO     | mean x: 1763820652.6350303
[2025-11-22 19:00:49] 2025-11-23 00:00:08,387 | INFO     | mean y: 2866344.0241587576
[2025-11-22 19:00:49] 2025-11-23 00:00:08,387 | INFO     | intersect: -7326054754.363388
[2025-11-22 19:00:49] 2025-11-23 00:00:08,388 | INFO     | chi2: 6.012664124503715
[2025-11-22 19:00:49] 2025-11-23 00:00:08,390 | INFO     | sum of square deviations: 476533924001.0924
[2025-11-22 19:00:49] 2025-11-23 00:00:08,414 | INFO     | sum of deviations: 2368264363904.7495
[2025-11-22 19:00:49] 2025-11-23 00:00:08,414 | INFO     | mean x: 1763820500.1377816
[2025-11-22 19:00:49] 2025-11-23 00:00:08,414 | INFO     | mean y: 2875222.542461005
[2025-11-22 19:00:49] 2025-11-23 00:00:08,415 | INFO     | intersect: -8762908333.28133
[2025-11-22 19:00:49] 2025-11-23 00:00:08,416 | INFO     | chi2: 3.1637215036595485
[2025-11-22 19:00:49] 2025-11-23 00:00:08,416 | INFO     | current chi2=3.1637215036595485 (change=47.38236764687597 %)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,418 | INFO     | sum of square deviations: 470366804936.55035
[2025-11-22 19:00:49] 2025-11-23 00:00:08,464 | INFO     | sum of deviations: 2542041823701.156
[2025-11-22 19:00:49] 2025-11-23 00:00:08,464 | INFO     | mean x: 1763820347.640557
[2025-11-22 19:00:49] 2025-11-23 00:00:08,465 | INFO     | mean y: 2879517.627502176
[2025-11-22 19:00:49] 2025-11-23 00:00:08,465 | INFO     | intersect: -9529479156.795181
[2025-11-22 19:00:49] 2025-11-23 00:00:08,466 | INFO     | chi2: 2.404316221151281
[2025-11-22 19:00:49] 2025-11-23 00:00:08,467 | INFO     | current chi2=2.404316221151281 (change=24.003543979134896 %)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,467 | INFO     | right removable region: 1148
[2025-11-22 19:00:49] 2025-11-23 00:00:08,468 | INFO     | sum of square deviations: 476533545496.367
[2025-11-22 19:00:49] 2025-11-23 00:00:08,515 | INFO     | sum of deviations: 1706354453722.59
[2025-11-22 19:00:49] 2025-11-23 00:00:08,515 | INFO     | mean x: 1763820805.136915
[2025-11-22 19:00:49] 2025-11-23 00:00:08,515 | INFO     | mean y: 2873678.857019064
[2025-11-22 19:00:49] 2025-11-23 00:00:08,516 | INFO     | intersect: -6312953433.123044
[2025-11-22 19:00:49] 2025-11-23 00:00:08,517 | INFO     | chi2: 3.9734123748845103
[2025-11-22 19:00:49] 2025-11-23 00:00:08,517 | INFO     | current chi2=3.9734123748845103 (change=33.915943205750324 %)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,519 | INFO     | sum of square deviations: 470366259475.9337
[2025-11-22 19:00:49] 2025-11-23 00:00:08,565 | INFO     | sum of deviations: 1628981762262.3162
[2025-11-22 19:00:49] 2025-11-23 00:00:08,565 | INFO     | mean x: 1763820957.6362054
[2025-11-22 19:00:49] 2025-11-23 00:00:08,565 | INFO     | mean y: 2875591.7519582245
[2025-11-22 19:00:49] 2025-11-23 00:00:08,566 | INFO     | intersect: -6105624144.361535
[2025-11-22 19:00:49] 2025-11-23 00:00:08,567 | INFO     | chi2: 3.914126155472077
[2025-11-22 19:00:49] 2025-11-23 00:00:08,567 | INFO     | current chi2=3.914126155472077 (change=1.4920731557382456 %)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,568 | INFO     | left removable region: 20
[2025-11-22 19:00:49] 2025-11-23 00:00:08,569 | INFO     | sum of square deviations: 445044626511.4452
[2025-11-22 19:00:49] 2025-11-23 00:00:08,605 | INFO     | monitor loop #5035: job 0:6894286259 is in state 'finished'
[2025-11-22 19:00:49] 2025-11-23 00:00:08,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,614 | INFO     | sum of deviations: 2076302938647.1648
[2025-11-22 19:00:49] 2025-11-23 00:00:08,614 | INFO     | mean x: 1763820927.1445036
[2025-11-22 19:00:49] 2025-11-23 00:00:08,614 | INFO     | mean y: 2891945.293439716
[2025-11-22 19:00:49] 2025-11-23 00:00:08,615 | INFO     | intersect: -8226005464.353901
[2025-11-22 19:00:49] 2025-11-23 00:00:08,616 | INFO     | chi2: 0.22931957107297946
[2025-11-22 19:00:49] 2025-11-23 00:00:08,617 | INFO     | current memory leak: 4.67 B/s (using 1128 data points, chi2=0.23)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,618 | INFO     | could have reported an average CPU frequency of 2636 MHz (42 samples)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,618 | INFO     | ..............................
[2025-11-22 19:00:49] 2025-11-23 00:00:08,618 | INFO     | . Timing measurements:
[2025-11-22 19:00:49] 2025-11-23 00:00:08,618 | INFO     | . get job = 0 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,618 | INFO     | . initial setup = 2 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,619 | INFO     | . payload setup = 5 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,619 | INFO     | . stage-in = 0 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,619 | INFO     | . payload execution = 70665 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,619 | INFO     | . stage-out = 4 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,619 | INFO     | . log creation = 0 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,620 | INFO     | ..............................
[2025-11-22 19:00:49] 2025-11-23 00:00:08,730 | INFO     | 
[2025-11-22 19:00:49] 2025-11-23 00:00:08,730 | INFO     | job summary report
[2025-11-22 19:00:49] 2025-11-23 00:00:08,730 | INFO     | --------------------------------------------------
[2025-11-22 19:00:49] 2025-11-23 00:00:08,730 | INFO     | PanDA job id: 6894286259
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | task id: 47533967
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | errors: (none)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | pilot state: finished 
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | transexitcode: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:08,731 | INFO     | exeerrorcode: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:08,732 | INFO     | exeerrordiag: 
[2025-11-22 19:00:49] 2025-11-23 00:00:08,732 | INFO     | exitcode: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:08,732 | INFO     | exitmsg: OK
[2025-11-22 19:00:49] 2025-11-23 00:00:08,732 | INFO     | cpuconsumptiontime: 543794 s
[2025-11-22 19:00:49] 2025-11-23 00:00:08,732 | INFO     | nevents: 1000
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | neventsw: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | pid: 27021
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | pgrp: 27021
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | corecount: 8
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | event service: False
[2025-11-22 19:00:49] 2025-11-23 00:00:08,733 | INFO     | sizes: {0: 2298756, 1: 2298784, 4: 2299046, 12: 2299074, 70674: 2355817, 70675: 2355816, 70679: 2364994, 70682: 2365050, 70686: 2365296}
[2025-11-22 19:00:49] 2025-11-23 00:00:08,734 | INFO     | --------------------------------------------------
[2025-11-22 19:00:49] 2025-11-23 00:00:08,734 | INFO     | 
[2025-11-22 19:00:49] 2025-11-23 00:00:08,734 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 19:00:49] 2025-11-23 00:00:08,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:00:49] 2025-11-23 00:00:08,756 | INFO     | job 6894286259 has completed (purged errors)
[2025-11-22 19:00:49] 2025-11-23 00:00:08,757 | INFO     | overall cleanup function is called
[2025-11-22 19:00:49] 2025-11-23 00:00:09,109 | INFO     | PID=20489 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 19:00:49] 2025-11-23 00:00:09,110 | INFO     | .. there are 3 such processes running
[2025-11-22 19:00:49] 2025-11-23 00:00:09,769 | INFO     | --- collectZombieJob: --- 10, [27021]
[2025-11-22 19:00:49] 2025-11-23 00:00:09,770 | INFO     | zombie collector waiting for pid 27021
[2025-11-22 19:00:49] 2025-11-23 00:00:09,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:00:49] 2025-11-23 00:00:09,770 | INFO     | collected zombie processes
[2025-11-22 19:00:49] 2025-11-23 00:00:09,770 | INFO     | will attempt to kill all subprocesses of pid=27021
[2025-11-22 19:00:49] 2025-11-23 00:00:09,951 | INFO     | process IDs to be killed: [27021] (in reverse order)
[2025-11-22 19:00:49] 2025-11-23 00:00:10,017 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:00:49] 2025-11-23 00:00:10,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:00:49] 2025-11-23 00:00:10,020 | INFO     | did not find any defunct processes belonging to 27021
[2025-11-22 19:00:49] 2025-11-23 00:00:10,023 | INFO     | did not find any defunct processes belonging to 27021
[2025-11-22 19:00:49] 2025-11-23 00:00:10,024 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:00:49] 2025-11-23 00:00:10,024 | INFO     | ready for new job
[2025-11-22 19:00:49] 2025-11-23 00:00:10,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:00:49] 2025-11-23 00:00:10,028 | INFO     | ***************************************
[2025-11-22 19:00:49] 2025-11-23 00:00:10,028 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:00:49] 2025-11-23 00:00:10,028 | INFO     | ***************************************
[2025-11-22 19:00:49] 2025-11-23 00:00:10,028 | INFO     | 
[2025-11-22 19:00:49] 2025-11-23 00:00:10,029 | INFO     | architecture information:
[2025-11-22 19:00:49] 2025-11-23 00:00:10,029 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:00:49] 2025-11-23 00:00:10,042 | INFO     | cat /etc/os-release:
[2025-11-22 19:00:49] NAME="CentOS Linux"
[2025-11-22 19:00:49] VERSION="7 (Core)"
[2025-11-22 19:00:49] ID="centos"
[2025-11-22 19:00:49] ID_LIKE="rhel fedora"
[2025-11-22 19:00:49] VERSION_ID="7"
[2025-11-22 19:00:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:00:49] ANSI_COLOR="0;31"
[2025-11-22 19:00:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:00:49] HOME_URL="https://www.centos.org/"
[2025-11-22 19:00:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:00:49] 
[2025-11-22 19:00:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:00:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:00:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:00:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:00:49] 
[2025-11-22 19:00:49] 2025-11-23 00:00:10,043 | INFO     | ***************************************
[2025-11-22 19:00:49] 2025-11-23 00:00:10,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 19:00:49] 2025-11-23 00:00:10,562 | INFO     | sufficient remaining disk space (26388463616 B)
[2025-11-22 19:00:49] 2025-11-23 00:00:10,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:00:49] 2025-11-23 00:00:10,563 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:00:49] 2025-11-23 00:00:10,563 | INFO     | update_server=False
[2025-11-22 19:00:49] 2025-11-23 00:00:10,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:00:49] 2025-11-23 00:00:10,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:00:49] 2025-11-23 00:00:10,564 | INFO     | aborting loop
[2025-11-22 19:00:49] 2025-11-23 00:00:10,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:00:49] 2025-11-23 00:00:10,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:00:49] 2025-11-23 00:00:11,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:00:49] 2025-11-23 00:00:11,372 | INFO     | all job control threads have been joined
[2025-11-22 19:00:49] 2025-11-23 00:00:11,456 | INFO     | all data control threads have been joined
[2025-11-22 19:00:49] 2025-11-23 00:00:11,568 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,569 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,569 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,577 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,718 | INFO     | all payload control threads have been joined
[2025-11-22 19:00:49] 2025-11-23 00:00:11,845 | INFO     | [job] validate thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,913 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:11,925 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,339 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,377 | INFO     | [job] control thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,396 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,462 | INFO     | [data] control thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,569 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,724 | INFO     | [payload] control thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:12,956 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:15,023 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:20,854 | INFO     | job.realtimelogging is not enabled
[2025-11-22 19:00:49] 2025-11-23 00:00:21,860 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:00:49] 2025-11-23 00:00:41,359 | INFO     | PID=20489 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 19:00:49] 2025-11-23 00:00:41,360 | INFO     | .. there are 3 such processes running
[2025-11-22 19:00:49] 2025-11-23 00:00:41,360 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:00:49] 2025-11-23 00:00:41,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:00:49] 2025-11-23 00:00:41,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:00:49] 2025-11-23 00:00:43,942 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:00:49] 2025-11-23 00:00:44,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423958202176)>', '<ExcThread(monitor, started 140423536301824)>']
[2025-11-22 19:00:49] 2025-11-23 00:00:44,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:00:49] 2025-11-23 00:00:44,377 | INFO     | [monitor] control thread has ended
[2025-11-22 19:00:49] 2025-11-23 00:00:49,162 | INFO     | all workflow threads have been joined
[2025-11-22 19:00:49] 2025-11-23 00:00:49,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:00:49] 2025-11-23 00:00:49,163 | INFO     | traces error code: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:49,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:00:49] 2025-11-23 00:00:49,277 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:00:49] 2025-11-23 00:00:49,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:00:49] 2025-11-23 00:00:49,282 [wrapper] pilotpid: 20489
[2025-11-22 19:00:49] 2025-11-23 00:00:49,285 [wrapper] Pilot exit status: 0
[2025-11-22 19:00:49] 2025-11-23 00:00:49,293 [wrapper] pandaids: 6894286259
[2025-11-22 19:00:49] 2025-11-23 00:00:49,321 [wrapper] cleanup supervisor_pilot 31797 20490
[2025-11-22 19:00:49] 2025-11-23 00:00:49,323 [wrapper] Test setup, not cleaning
[2025-11-22 19:00:49] 2025-11-23 00:00:49,325 [wrapper] apfmon messages muted
[2025-11-22 19:00:49] 2025-11-23 00:00:49,327 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:00:49] 2025-11-23 00:00:49,329 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:00:49]  *** Error codes and diagnostics ***
[2025-11-22 19:00:49]     "exeErrorCode": 0,
[2025-11-22 19:00:49]     "exeErrorDiag": "",
[2025-11-22 19:00:49]     "pilotErrorCode": 0,
[2025-11-22 19:00:49]     "pilotErrorDiag": "",
[2025-11-22 19:00:49]  *** Listing of results directory ***
[2025-11-22 19:00:49] total 1330204
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 05:18 pilot3.tar.gz
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 05:28 queuedata.json
[2025-11-22 19:00:49] -rwx------ 1 boincer umatlas     36292 Nov 21 05:28 runpilot2-wrapper.sh
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas       100 Nov 21 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:00:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 23:21 run_atlas
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas       105 Nov 21 23:21 job.xml
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas 412160834 Nov 21 23:21 EVNT.47493127._002370.pool.root.1
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:21 start_atlas.sh
[2025-11-22 19:00:49] drwxrwx--x 2 boincer umatlas      4096 Nov 21 23:21 shared
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas    590105 Nov 21 23:21 input.tar.gz
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas         0 Nov 21 23:21 boinc_lockfile
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 23:21 pandaJob.out
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas        57 Nov 21 23:21 setup.sh.local
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas    989752 Nov 21 23:21 agis_schedconf.cvmfs.json
[2025-11-22 19:00:49] drwx------ 5 boincer umatlas      4096 Nov 21 23:21 pilot3
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas       533 Nov 22 18:45 boinc_task_state.xml
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas      5954 Nov 22 18:57 init_data.xml
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas 921875464 Nov 22 18:59 HITS.47533967._003420.pool.root.1
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas      1067 Nov 22 18:59 memory_monitor_summary.json
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas        95 Nov 22 18:59 pilot_heartbeat.json
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas   1526164 Nov 22 19:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas   2319779 Nov 22 19:00 log.47533967._003420.job.log.tgz.1
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas      8663 Nov 22 19:00 heartbeat.json
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas        29 Nov 22 19:00 wrapper_checkpoint.txt
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 19:00 boinc_mmap_file
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas      4893 Nov 22 19:00 pilotlog.txt
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas   9763766 Nov 22 19:00 log.47533967._003420.job.log.1
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas       353 Nov 22 19:00 output.list
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas       620 Nov 22 19:00 runtime_log
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas  12103680 Nov 22 19:00 result.tar.gz
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas       668 Nov 22 19:00 WDeLDm1Ydg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqHJKDmsl4WZm.diag
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 19:00 runtime_log.err
[2025-11-22 19:00:49] -rw-r--r-- 1 boincer umatlas     21382 Nov 22 19:00 stderr.txt
[2025-11-22 19:00:49] HITS file was successfully produced:
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas 921875464 Nov 22 18:59 shared/HITS.pool.root.1
[2025-11-22 19:00:49]  *** Contents of shared directory: ***
[2025-11-22 19:00:49] total 1315196
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas 412160834 Nov 21 23:21 ATLAS.root_0
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:21 start_atlas.sh
[2025-11-22 19:00:49] -rw-r--r-- 2 boincer umatlas    590105 Nov 21 23:21 input.tar.gz
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas 921875464 Nov 22 18:59 HITS.pool.root.1
[2025-11-22 19:00:49] -rw------- 1 boincer umatlas  12103680 Nov 22 19:00 result.tar.gz
19:00:51 (16786): run_atlas exited; CPU time 542521.936448
19:00:51 (16786): called boinc_finish(0)

</stderr_txt>
]]>

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