Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
00:13:37 (161579): wrapper (7.7.26015): starting
00:13:37 (161579): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 00:13:37] Arguments: --nthreads 12
[2025-11-22 00:13:37] Threads: 12
[2025-11-22 00:13:37] Checking for CVMFS
[2025-11-22 00:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:13:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:13:37] 2.13.3.0 3203 473 46308 153161 3 49 2096062 4096000 1693 130560 0 532275 99.948 149825 3468 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 00:13:37] CVMFS is ok
[2025-11-22 00:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:13:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 00:13:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 00:13:37] Further information can be found at the LHC@home message board.
[2025-11-22 00:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:13:37] Checking for apptainer binary...
[2025-11-22 00:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:13:37] Running /usr/bin/apptainer --version
[2025-11-22 00:13:37] apptainer version 1.4.4
[2025-11-22 00:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:13:37] zhiwei-Z790-Riptide-WiFi
[2025-11-22 00:13:37] apptainer works
[2025-11-22 00:13:37] Set ATHENA_PROC_NUMBER=12
[2025-11-22 00:13:37] Set ATHENA_CORE_NUMBER=12
[2025-11-22 00:13:37] Starting ATLAS job with PandaID=6894285331
[2025-11-22 00:13:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 03:06:29]  *** The last 200 lines of the pilot log: ***
[2025-11-22 03:06:29] 2025-11-22 08:05:57,415 | INFO     | extracted standard info from prmon json
[2025-11-22 03:06:29] 2025-11-22 08:05:57,415 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 03:06:29] 2025-11-22 08:05:57,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 03:06:29] 2025-11-22 08:05:57,416 | INFO     | fitting pss+swap vs Time
[2025-11-22 03:06:29] 2025-11-22 08:05:57,416 | INFO     | sum of square deviations: 1523386702.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | sum of deviations: 27228758917.000004
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | mean x: 1763793593.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | mean y: 3474897.7294117645
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | intersect: -31522276546.697815
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | chi2: 3.684801212337357
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | sum of square deviations: 1392881930.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | sum of deviations: 77810006984.99995
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | mean x: 1763793441.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,417 | INFO     | mean y: 3533556.6121212123
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | intersect: -98526555037.69328
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | chi2: 1.6160390734577939
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | current chi2=1.6160390734577939 (change=56.14311382532623 %)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | sum of square deviations: 1270051720.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | sum of deviations: 73366809227.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | mean x: 1763793288.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | mean y: 3528042.09375
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | intersect: -101885145998.77473
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | chi2: 1.6167473833698278
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | current chi2=1.6167473833698278 (change=-0.043829999142187534 %)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | right removable region: 159
[2025-11-22 03:06:29] 2025-11-22 08:05:57,418 | INFO     | sum of square deviations: 1392881930.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | sum of deviations: -11752179663.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | mean x: 1763793746.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | mean y: 3519884.187878788
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | intersect: 14885198327.290224
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | chi2: 2.159824805838187
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | current chi2=2.159824805838187 (change=41.38558143634135 %)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | sum of square deviations: 1270051720.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | sum of deviations: -18141287424.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | mean x: 1763793898.5
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | mean y: 3527799.49375
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | intersect: 25197377440.72559
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | chi2: 2.14026856433771
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | current chi2=2.14026856433771 (change=0.9054549909610483 %)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,419 | INFO     | left removable region: 20
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | sum of square deviations: 832722590.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | sum of deviations: 18242620045.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | mean x: 1763793868.0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | mean y: 3601748.381294964
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | intersect: -38636182686.462585
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | chi2: 0.019367797829870487
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | current memory leak: 21.91 B/s (using 139 data points, chi2=0.02)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | could have reported an average CPU frequency of 4289 MHz (9 samples)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | ..............................
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . Timing measurements:
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . get job = 0 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . initial setup = 1 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . payload setup = 2 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . stage-in = 0 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . payload execution = 10312 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . stage-out = 0 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,420 | INFO     | . log creation = 0 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,421 | INFO     | ..............................
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | 
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | job summary report
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | --------------------------------------------------
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | PanDA job id: 6894285331
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | task id: 47533967
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | errors: (none)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | pilot state: finished 
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | transexitcode: 0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | exeerrorcode: 0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | exeerrordiag: 
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | exitcode: 0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | exitmsg: OK
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | cpuconsumptiontime: 119271 s
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | nevents: 1000
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | neventsw: 0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,449 | INFO     | pid: 172110
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | pgrp: 172110
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | corecount: 12
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | event service: False
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2299097, 11: 2299125, 10318: 2329051, 10319: 2338229, 10322: 2338483}
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | --------------------------------------------------
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | 
[2025-11-22 03:06:29] 2025-11-22 08:05:57,450 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 03:06:29] 2025-11-22 08:05:57,460 | INFO     | job 6894285331 has completed (purged errors)
[2025-11-22 03:06:29] 2025-11-22 08:05:57,460 | INFO     | overall cleanup function is called
[2025-11-22 03:06:29] 2025-11-22 08:05:57,746 | INFO     | PID=165437 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 03:06:29] 2025-11-22 08:05:58,469 | INFO     | --- collectZombieJob: --- 10, [172110]
[2025-11-22 03:06:29] 2025-11-22 08:05:58,470 | INFO     | zombie collector waiting for pid 172110
[2025-11-22 03:06:29] 2025-11-22 08:05:58,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 03:06:29] 2025-11-22 08:05:58,470 | INFO     | collected zombie processes
[2025-11-22 03:06:29] 2025-11-22 08:05:58,470 | INFO     | will attempt to kill all subprocesses of pid=172110
[2025-11-22 03:06:29] 2025-11-22 08:05:58,534 | INFO     | process IDs to be killed: [172110] (in reverse order)
[2025-11-22 03:06:29] 2025-11-22 08:05:58,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 03:06:29] 2025-11-22 08:05:58,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 03:06:29] 2025-11-22 08:05:58,560 | INFO     | did not find any defunct processes belonging to 172110
[2025-11-22 03:06:29] 2025-11-22 08:05:58,562 | INFO     | did not find any defunct processes belonging to 172110
[2025-11-22 03:06:29] 2025-11-22 08:05:58,563 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 03:06:29] 2025-11-22 08:05:58,563 | INFO     | ready for new job
[2025-11-22 03:06:29] 2025-11-22 08:05:58,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 03:06:29] 2025-11-22 08:05:58,564 | INFO     | ***************************************
[2025-11-22 03:06:29] 2025-11-22 08:05:58,564 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 03:06:29] 2025-11-22 08:05:58,564 | INFO     | ***************************************
[2025-11-22 03:06:29] 2025-11-22 08:05:58,564 | INFO     | 
[2025-11-22 03:06:29] 2025-11-22 08:05:58,564 | INFO     | architecture information:
[2025-11-22 03:06:29] 2025-11-22 08:05:58,565 | INFO     | executing command: cat /etc/os-release
[2025-11-22 03:06:29] 2025-11-22 08:05:58,571 | INFO     | cat /etc/os-release:
[2025-11-22 03:06:29] NAME="CentOS Linux"
[2025-11-22 03:06:29] VERSION="7 (Core)"
[2025-11-22 03:06:29] ID="centos"
[2025-11-22 03:06:29] ID_LIKE="rhel fedora"
[2025-11-22 03:06:29] VERSION_ID="7"
[2025-11-22 03:06:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 03:06:29] ANSI_COLOR="0;31"
[2025-11-22 03:06:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 03:06:29] HOME_URL="https://www.centos.org/"
[2025-11-22 03:06:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 03:06:29] 
[2025-11-22 03:06:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 03:06:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 03:06:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 03:06:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 03:06:29] 
[2025-11-22 03:06:29] 2025-11-22 08:05:58,571 | INFO     | ***************************************
[2025-11-22 03:06:29] 2025-11-22 08:05:59,074 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | INFO     | sufficient remaining disk space (1802400432128 B)
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | INFO     | update_server=False
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 03:06:29] 2025-11-22 08:05:59,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:06:29] 2025-11-22 08:05:59,095 | INFO     | job.realtimelogging is not enabled
[2025-11-22 03:06:29] 2025-11-22 08:05:59,327 | INFO     | all payload control threads have been joined
[2025-11-22 03:06:29] 2025-11-22 08:05:59,400 | INFO     | all data control threads have been joined
[2025-11-22 03:06:29] 2025-11-22 08:05:59,436 | INFO     | [monitor] cgroup control has ended
[2025-11-22 03:06:29] 2025-11-22 08:05:59,616 | INFO     | all job control threads have been joined
[2025-11-22 03:06:29] 2025-11-22 08:05:59,777 | WARNING  | process 172110 can no longer be monitored (due to stat problems) - aborting
[2025-11-22 03:06:29] 2025-11-22 08:05:59,841 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 03:06:29] 2025-11-22 08:05:59,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 03:06:29] 2025-11-22 08:05:59,932 | INFO     | number of running child processes to parent process 172110: 1
[2025-11-22 03:06:29] 2025-11-22 08:05:59,932 | INFO     | maximum number of monitored processes: 17
[2025-11-22 03:06:29] 2025-11-22 08:05:59,932 | INFO     | aborting job monitoring since job object (job id=6894285331) has expired
[2025-11-22 03:06:29] 2025-11-22 08:05:59,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:06:29] 2025-11-22 08:05:59,932 | INFO     | will abort loop
[2025-11-22 03:06:29] 2025-11-22 08:06:00,086 | INFO     | [job] retrieve thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,086 | INFO     | [job] queue monitor thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,142 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,333 | INFO     | [payload] control thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 03:06:29] 2025-11-22 08:06:00,406 | INFO     | [data] control thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,412 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,622 | INFO     | [job] control thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,847 | INFO     | [payload] validate_post thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:00,936 | INFO     | [job] job monitor thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:01,397 | INFO     | [payload] failed_post thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:01,496 | INFO     | [job] validate thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:01,546 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:01,576 | INFO     | [data] copytool_in thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:01,863 | INFO     | [data] copytool_out thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:04,387 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 03:06:29] 2025-11-22 08:06:05,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127377537156928)>', '<ExcThread(monitor, started 127376918836992)>']
[2025-11-22 03:06:29] 2025-11-22 08:06:10,756 | INFO     | all workflow threads have been joined
[2025-11-22 03:06:29] 2025-11-22 08:06:10,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 03:06:29] 2025-11-22 08:06:10,756 | INFO     | traces error code: 0
[2025-11-22 03:06:29] 2025-11-22 08:06:10,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 03:06:29] 2025-11-22 08:06:29,883 | INFO     | PID=165437 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 03:06:29] 2025-11-22 08:06:29,884 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 03:06:29] 2025-11-22 08:06:29,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 03:06:29] 2025-11-22 08:06:29,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 03:06:29] 2025-11-22 08:06:29,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 03:06:29] 2025-11-22 08:06:29,884 | INFO     | [monitor] control thread has ended
[2025-11-22 03:06:29] 2025-11-22 08:06:29,926 [wrapper] ==== pilot stdout END ====
[2025-11-22 03:06:29] 2025-11-22 08:06:29,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 03:06:29] 2025-11-22 08:06:29,928 [wrapper] pilotpid: 165437
[2025-11-22 03:06:29] 2025-11-22 08:06:29,929 [wrapper] Pilot exit status: 0
[2025-11-22 03:06:29] 2025-11-22 08:06:29,933 [wrapper] pandaids: 6894285331
[2025-11-22 03:06:29] 2025-11-22 08:06:29,951 [wrapper] cleanup supervisor_pilot  208722 165438
[2025-11-22 03:06:29] 2025-11-22 08:06:29,953 [wrapper] Test setup, not cleaning
[2025-11-22 03:06:29] 2025-11-22 08:06:29,954 [wrapper] apfmon messages muted
[2025-11-22 03:06:29] 2025-11-22 08:06:29,955 [wrapper] ==== wrapper stdout END ====
[2025-11-22 03:06:29] 2025-11-22 08:06:29,956 [wrapper] ==== wrapper stderr END ====
[2025-11-22 03:06:29]  *** Error codes and diagnostics ***
[2025-11-22 03:06:29]     "exeErrorCode": 0,
[2025-11-22 03:06:29]     "exeErrorDiag": "",
[2025-11-22 03:06:29]     "pilotErrorCode": 0,
[2025-11-22 03:06:29]     "pilotErrorDiag": "",
[2025-11-22 03:06:29]  *** Listing of results directory ***
[2025-11-22 03:06:29] total 1293652
[2025-11-22 03:06:29] -rwx------ 1 boinc boinc     36292 Nov 21 04:54 runpilot2-wrapper.sh
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc      5112 Nov 21 04:54 queuedata.json
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:54 pilot3.tar.gz
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc       100 Nov 22 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 03:06:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 00:13 run_atlas
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc       105 Nov 22 00:13 job.xml
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc 409797720 Nov 22 00:13 EVNT.47493127._002360.pool.root.1
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc    590091 Nov 22 00:13 input.tar.gz
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc     15847 Nov 22 00:13 start_atlas.sh
[2025-11-22 03:06:29] drwxrwx--x 2 boinc boinc      4096 Nov 22 00:13 shared
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc         0 Nov 22 00:13 boinc_setup_complete
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc      8824 Nov 22 00:13 init_data.xml
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc         0 Nov 22 00:13 boinc_lockfile
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc      2786 Nov 22 00:13 pandaJob.out
[2025-11-22 03:06:29] -rw------- 1 boinc boinc    989752 Nov 22 00:13 agis_schedconf.cvmfs.json
[2025-11-22 03:06:29] -rw------- 1 boinc boinc   1526164 Nov 22 00:13 agis_ddmendpoints.agis.ALL.json
[2025-11-22 03:06:29] drwx------ 5 boinc boinc      4096 Nov 22 00:13 pilot3
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc       532 Nov 22 03:01 boinc_task_state.xml
[2025-11-22 03:06:29] -rw------- 1 boinc boinc 904147595 Nov 22 03:05 HITS.47533967._003316.pool.root.1
[2025-11-22 03:06:29] -rw------- 1 boinc boinc        95 Nov 22 03:05 pilot_heartbeat.json
[2025-11-22 03:06:29] -rw------- 1 boinc boinc      1032 Nov 22 03:05 memory_monitor_summary.json
[2025-11-22 03:06:29] -rw------- 1 boinc boinc   1906866 Nov 22 03:05 log.47533967._003316.job.log.tgz.1
[2025-11-22 03:06:29] -rw------- 1 boinc boinc      8592 Nov 22 03:05 heartbeat.json
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc      8192 Nov 22 03:06 boinc_mmap_file
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc        29 Nov 22 03:06 wrapper_checkpoint.txt
[2025-11-22 03:06:29] -rw------- 1 boinc boinc       746 Nov 22 03:06 pilotlog.txt
[2025-11-22 03:06:29] -rw------- 1 boinc boinc   1507602 Nov 22 03:06 log.47533967._003316.job.log.1
[2025-11-22 03:06:29] -rw------- 1 boinc boinc       353 Nov 22 03:06 output.list
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc       620 Nov 22 03:06 runtime_log
[2025-11-22 03:06:29] -rw------- 1 boinc boinc   3430400 Nov 22 03:06 result.tar.gz
[2025-11-22 03:06:29] -rw------- 1 boinc boinc       667 Nov 22 03:06 UzSMDm61cg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpGJKDmFzt5Bn.diag
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc      8856 Nov 22 03:06 runtime_log.err
[2025-11-22 03:06:29] -rw-r--r-- 1 boinc boinc     21364 Nov 22 03:06 stderr.txt
[2025-11-22 03:06:29] HITS file was successfully produced:
[2025-11-22 03:06:29] -rw------- 1 boinc boinc 904147595 Nov 22 03:05 shared/HITS.pool.root.1
[2025-11-22 03:06:29]  *** Contents of shared directory: ***
[2025-11-22 03:06:29] total 1287112
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc 409797720 Nov 22 00:13 ATLAS.root_0
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc    590091 Nov 22 00:13 input.tar.gz
[2025-11-22 03:06:29] -rw-r--r-- 2 boinc boinc     15847 Nov 22 00:13 start_atlas.sh
[2025-11-22 03:06:29] -rw------- 1 boinc boinc 904147595 Nov 22 03:05 HITS.pool.root.1
[2025-11-22 03:06:29] -rw------- 1 boinc boinc   3430400 Nov 22 03:06 result.tar.gz
03:06:31 (161579): run_atlas exited; CPU time 119196.649263
03:06:31 (161579): called boinc_finish(0)

</stderr_txt>
]]>

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