Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:28:02 (25297): wrapper (7.7.26015): starting
21:28:02 (25297): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 21:28:02] Arguments: --nthreads 8
[2025-11-24 21:28:02] Threads: 8
[2025-11-24 21:28:02] Checking for CVMFS
[2025-11-24 21:28:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 21:28:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 21:28:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 21:28:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 21:28:05] 2.11.2.0 19767 78365 91276 153258 1 84 19409414 25165825 1027 130560 12 23259249 99.854 17058962 2156 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 21:28:05] CVMFS is ok
[2025-11-24 21:28:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 21:28:05] Checking for apptainer binary...
[2025-11-24 21:28:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 21:28:05] Running /usr/bin/apptainer --version
[2025-11-24 21:28:05] apptainer version 1.3.2-1.el7
[2025-11-24 21:28:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 21:28:28] cg-vwn305.simple-grid.lan
[2025-11-24 21:28:28] apptainer works
[2025-11-24 21:28:28] Set ATHENA_PROC_NUMBER=8
[2025-11-24 21:28:28] Set ATHENA_CORE_NUMBER=8
[2025-11-24 21:28:28] Starting ATLAS job with PandaID=6894285339
[2025-11-24 21:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:59:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:59:40] 2025-11-25 20:58:53,433 | INFO     | time since job start (87971s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:58:53,719 | INFO     | monitor loop #5932: job 0:6894285339 is in state 'finished'
[2025-11-25 21:59:40] 2025-11-25 20:58:53,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:59:40] 2025-11-25 20:58:55,440 | INFO     | time since job start (87973s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:58:56,225 | INFO     | monitor loop #5933: job 0:6894285339 is in state 'finished'
[2025-11-25 21:59:40] 2025-11-25 20:58:56,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:59:40] 2025-11-25 20:58:57,452 | INFO     | time since job start (87975s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:58:58,736 | INFO     | monitor loop #5934: job 0:6894285339 is in state 'finished'
[2025-11-25 21:59:40] 2025-11-25 20:58:58,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:59:40] 2025-11-25 20:58:59,459 | INFO     | time since job start (87977s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:59:01,251 | INFO     | monitor loop #5935: job 0:6894285339 is in state 'finished'
[2025-11-25 21:59:40] 2025-11-25 20:59:01,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:59:40] 2025-11-25 20:59:01,465 | INFO     | time since job start (87979s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:59:03,475 | INFO     | time since job start (87981s) is within the limit (172800.0s)
[2025-11-25 21:59:40] 2025-11-25 20:59:03,755 | INFO     | monitor loop #5936: job 0:6894285339 is in state 'finished'
[2025-11-25 21:59:40] 2025-11-25 20:59:03,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,123 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 21:59:40] 2025-11-25 20:59:04,124 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-25 21:59:40] 2025-11-25 20:59:04,126 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894285339/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,127 | INFO     | extracted standard info from prmon json
[2025-11-25 21:59:40] 2025-11-25 20:59:04,127 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:59:40] 2025-11-25 20:59:04,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:59:40] 2025-11-25 20:59:04,160 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:59:40] 2025-11-25 20:59:04,163 | INFO     | sum of square deviations: 910562085933.2294
[2025-11-25 21:59:40] 2025-11-25 20:59:04,235 | INFO     | sum of deviations: 4132496742022.8657
[2025-11-25 21:59:40] 2025-11-25 20:59:04,244 | INFO     | mean x: 1764060563.7060056
[2025-11-25 21:59:40] 2025-11-25 20:59:04,245 | INFO     | mean y: 2821962.7597765364
[2025-11-25 21:59:40] 2025-11-25 20:59:04,245 | INFO     | intersect: -8003193931.010542
[2025-11-25 21:59:40] 2025-11-25 20:59:04,247 | INFO     | chi2: 33.65968591138396
[2025-11-25 21:59:40] 2025-11-25 20:59:04,249 | INFO     | sum of square deviations: 901057913520.9318
[2025-11-25 21:59:40] 2025-11-25 20:59:04,303 | INFO     | sum of deviations: 4590518317489.906
[2025-11-25 21:59:40] 2025-11-25 20:59:04,303 | INFO     | mean x: 1764060411.2102313
[2025-11-25 21:59:40] 2025-11-25 20:59:04,304 | INFO     | mean y: 2829310.5402943236
[2025-11-25 21:59:40] 2025-11-25 20:59:04,304 | INFO     | intersect: -8984330681.40314
[2025-11-25 21:59:40] 2025-11-25 20:59:04,305 | INFO     | chi2: 30.575684333644293
[2025-11-25 21:59:40] 2025-11-25 20:59:04,305 | INFO     | current chi2=30.575684333644293 (change=9.162300521338596 %)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,306 | INFO     | right removable region: 1426
[2025-11-25 21:59:40] 2025-11-25 20:59:04,308 | INFO     | sum of square deviations: 901056860050.9324
[2025-11-25 21:59:40] 2025-11-25 20:59:04,378 | INFO     | sum of deviations: 3523924994367.134
[2025-11-25 21:59:40] 2025-11-25 20:59:04,379 | INFO     | mean x: 1764060716.2102313
[2025-11-25 21:59:40] 2025-11-25 20:59:04,379 | INFO     | mean y: 2831726.5795374913
[2025-11-25 21:59:40] 2025-11-25 20:59:04,379 | INFO     | intersect: -6896197541.210552
[2025-11-25 21:59:40] 2025-11-25 20:59:04,381 | INFO     | chi2: 28.619459491481763
[2025-11-25 21:59:40] 2025-11-25 20:59:04,381 | INFO     | current chi2=28.619459491481763 (change=14.974074425921943 %)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,381 | INFO     | left removable region: 10
[2025-11-25 21:59:40] 2025-11-25 20:59:04,383 | INFO     | sum of square deviations: 880379933973.6945
[2025-11-25 21:59:40] 2025-11-25 20:59:04,437 | INFO     | sum of deviations: 3524019399295.2266
[2025-11-25 21:59:40] 2025-11-25 20:59:04,438 | INFO     | mean x: 1764060685.7196329
[2025-11-25 21:59:40] 2025-11-25 20:59:04,438 | INFO     | mean y: 2849848.2146892655
[2025-11-25 21:59:40] 2025-11-25 20:59:04,438 | INFO     | intersect: -7058401593.479093
[2025-11-25 21:59:40] 2025-11-25 20:59:04,440 | INFO     | chi2: 20.64177375716317
[2025-11-25 21:59:40] 2025-11-25 20:59:04,440 | INFO     | current memory leak: 4.00 B/s (using 1416 data points, chi2=20.64)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,443 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,443 | INFO     | ..............................
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . Timing measurements:
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . get job = 0 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . initial setup = 7 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . payload setup = 193 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . stage-in = 0 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . payload execution = 87464 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . stage-out = 7 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | . log creation = 3 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,444 | INFO     | ..............................
[2025-11-25 21:59:40] 2025-11-25 20:59:04,576 | INFO     | 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,576 | INFO     | job summary report
[2025-11-25 21:59:40] 2025-11-25 20:59:04,576 | INFO     | --------------------------------------------------
[2025-11-25 21:59:40] 2025-11-25 20:59:04,576 | INFO     | PanDA job id: 6894285339
[2025-11-25 21:59:40] 2025-11-25 20:59:04,576 | INFO     | task id: 47533967
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | errors: (none)
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | pilot state: finished 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | transexitcode: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | exeerrorcode: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | exeerrordiag: 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | exitcode: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | exitmsg: OK
[2025-11-25 21:59:40] 2025-11-25 20:59:04,577 | INFO     | cpuconsumptiontime: 338516 s
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | nevents: 1000
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | neventsw: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | pid: 3120
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | pgrp: 3120
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | corecount: 8
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | event service: False
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | sizes: {0: 2284082, 1: 2284337, 12: 2284337, 23: 2284365, 34: 2284393, 44: 2284421, 55: 2284577, 66: 2284605, 77: 2284633, 87: 2284689, 98: 2284717, 109: 2285343, 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | --------------------------------------------------
[2025-11-25 21:59:40] 2025-11-25 20:59:04,578 | INFO     | 
[2025-11-25 21:59:40] 2025-11-25 20:59:04,579 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | job 6894285339 has completed (purged errors)
[2025-11-25 21:59:40] 2025-11-25 20:59:05,064 | INFO     | overall cleanup function is called
[2025-11-25 21:59:40] 2025-11-25 20:59:06,090 | INFO     | --- collectZombieJob: --- 10, [3120]
[2025-11-25 21:59:40] 2025-11-25 20:59:06,091 | INFO     | zombie collector waiting for pid 3120
[2025-11-25 21:59:40] 2025-11-25 20:59:06,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:59:40] 2025-11-25 20:59:06,091 | INFO     | collected zombie processes
[2025-11-25 21:59:40] 2025-11-25 20:59:06,091 | INFO     | will attempt to kill all subprocesses of pid=3120
[2025-11-25 21:59:40] 2025-11-25 20:59:06,223 | INFO     | process IDs to be killed: [3120] (in reverse order)
[2025-11-25 21:59:40] 2025-11-25 20:59:07,151 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:59:40] 2025-11-25 20:59:07,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:59:40] 2025-11-25 20:59:07,163 | INFO     | did not find any defunct processes belonging to 3120
[2025-11-25 21:59:40] 2025-11-25 20:59:07,166 | INFO     | did not find any defunct processes belonging to 3120
[2025-11-25 21:59:40] 2025-11-25 20:59:07,218 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:59:40] 2025-11-25 20:59:07,218 | INFO     | ready for new job
[2025-11-25 21:59:40] 2025-11-25 20:59:07,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:59:40] 2025-11-25 20:59:07,226 | INFO     | ***************************************
[2025-11-25 21:59:40] 2025-11-25 20:59:07,226 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:59:40] 2025-11-25 20:59:07,226 | INFO     | ***************************************
[2025-11-25 21:59:40] 2025-11-25 20:59:07,226 | INFO     | 
[2025-11-25 21:59:40] 2025-11-25 20:59:07,227 | INFO     | pilot is running in a VM
[2025-11-25 21:59:40] 2025-11-25 20:59:07,227 | INFO     | architecture information:
[2025-11-25 21:59:40] 2025-11-25 20:59:07,234 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:59:40] 2025-11-25 20:59:07,379 | INFO     | cat /etc/os-release:
[2025-11-25 21:59:40] NAME="CentOS Linux"
[2025-11-25 21:59:40] VERSION="7 (Core)"
[2025-11-25 21:59:40] ID="centos"
[2025-11-25 21:59:40] ID_LIKE="rhel fedora"
[2025-11-25 21:59:40] VERSION_ID="7"
[2025-11-25 21:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:59:40] ANSI_COLOR="0;31"
[2025-11-25 21:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:59:40] HOME_URL="https://www.centos.org/"
[2025-11-25 21:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:59:40] 
[2025-11-25 21:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:59:40] 
[2025-11-25 21:59:40] 2025-11-25 20:59:07,380 | INFO     | ***************************************
[2025-11-25 21:59:40] 2025-11-25 20:59:07,883 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-25 21:59:40] 2025-11-25 20:59:08,122 | INFO     | sufficient remaining disk space (495035875328 B)
[2025-11-25 21:59:40] 2025-11-25 20:59:08,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:59:40] 2025-11-25 20:59:08,123 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:59:40] 2025-11-25 20:59:08,123 | INFO     | update_server=False
[2025-11-25 21:59:40] 2025-11-25 20:59:08,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:59:40] 2025-11-25 20:59:08,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:59:40] 2025-11-25 20:59:08,125 | INFO     | aborting loop
[2025-11-25 21:59:40] 2025-11-25 20:59:08,240 | INFO     | all payload control threads have been joined
[2025-11-25 21:59:40] 2025-11-25 20:59:08,722 | INFO     | all data control threads have been joined
[2025-11-25 21:59:40] 2025-11-25 20:59:09,130 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,131 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,162 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,246 | INFO     | [payload] control thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,323 | INFO     | all job control threads have been joined
[2025-11-25 21:59:40] 2025-11-25 20:59:09,333 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:59:40] 2025-11-25 20:59:09,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:59:40] 2025-11-25 20:59:09,729 | INFO     | [data] control thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:09,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:59:40] 2025-11-25 20:59:09,969 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,329 | INFO     | [job] control thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,353 | INFO     | [job] validate thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,388 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,389 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,597 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:10,730 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:11,462 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:13,956 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:59:40] 2025-11-25 20:59:15,223 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:59:40] 2025-11-25 20:59:16,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358318470976)>', '<ExcThread(monitor, started 140357509572352)>']
[2025-11-25 21:59:40] 2025-11-25 20:59:21,931 | INFO     | all workflow threads have been joined
[2025-11-25 21:59:40] 2025-11-25 20:59:21,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:59:40] 2025-11-25 20:59:21,931 | INFO     | traces error code: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:21,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:59:40] 2025-11-25 20:59:36,644 | INFO     | PID=29036 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | INFO     | .. there are 9 such processes running
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:59:40] 2025-11-25 20:59:36,645 | INFO     | [monitor] control thread has ended
[2025-11-25 21:59:40] 2025-11-25 20:59:37,073 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:59:40] 2025-11-25 20:59:37,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:59:40] 2025-11-25 20:59:37,164 [wrapper] pilotpid: 29036
[2025-11-25 21:59:40] 2025-11-25 20:59:37,253 [wrapper] Pilot exit status: 0
[2025-11-25 21:59:40] 2025-11-25 20:59:37,716 [wrapper] pandaids: 6894285339
[2025-11-25 21:59:40] 2025-11-25 20:59:38,196 [wrapper] cleanup supervisor_pilot  3979 29037
[2025-11-25 21:59:40] 2025-11-25 20:59:38,255 [wrapper] Test setup, not cleaning
[2025-11-25 21:59:40] 2025-11-25 20:59:38,372 [wrapper] apfmon messages muted
[2025-11-25 21:59:40] 2025-11-25 20:59:38,451 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:59:40] 2025-11-25 20:59:38,500 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:59:40]  *** Error codes and diagnostics ***
[2025-11-25 21:59:40]     "exeErrorCode": 0,
[2025-11-25 21:59:40]     "exeErrorDiag": "",
[2025-11-25 21:59:40]     "pilotErrorCode": 0,
[2025-11-25 21:59:40]     "pilotErrorDiag": "",
[2025-11-25 21:59:40]  *** Listing of results directory ***
[2025-11-25 21:59:40] total 1324076
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc    576529 Nov 21 10:54 pilot3.tar.gz
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc      5112 Nov 21 10:59 queuedata.json
[2025-11-25 21:59:40] -rwx------. 1 boinc boinc     36292 Nov 21 11:01 runpilot2-wrapper.sh
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc       100 Nov 24 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:59:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 21:28 run_atlas
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc       105 Nov 24 21:28 job.xml
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc 407834112 Nov 24 21:28 EVNT.47493127._002361.pool.root.1
[2025-11-25 21:59:40] drwxrwx--x. 2 boinc boinc        68 Nov 24 21:28 shared
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc    590102 Nov 24 21:28 input.tar.gz
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc      6392 Nov 24 21:28 init_data.xml
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:28 start_atlas.sh
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc         0 Nov 24 21:28 boinc_lockfile
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc      2785 Nov 24 21:28 pandaJob.out
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc    991801 Nov 24 21:32 agis_schedconf.cvmfs.json
[2025-11-25 21:59:40] drwx------. 5 boinc boinc      4096 Nov 24 21:32 pilot3
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc       533 Nov 25 21:32 boinc_task_state.xml
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc 915583164 Nov 25 21:56 HITS.47533967._003324.pool.root.1
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc      1031 Nov 25 21:57 memory_monitor_summary.json
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc   1516240 Nov 25 21:57 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc   2527286 Nov 25 21:57 log.47533967._003324.job.log.tgz.1
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc        95 Nov 25 21:58 pilot_heartbeat.json
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc      8632 Nov 25 21:59 heartbeat.json
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc       820 Nov 25 21:59 pilotlog.txt
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc  11736069 Nov 25 21:59 log.47533967._003324.job.log.1
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc       353 Nov 25 21:59 output.list
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc       620 Nov 25 21:59 runtime_log
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc  14284800 Nov 25 21:59 result.tar.gz
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc      8817 Nov 25 21:59 runtime_log.err
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc       662 Nov 25 21:59 0ycKDm27cg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1GJKDmjkT6sn.diag
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc      8192 Nov 25 21:59 boinc_mmap_file
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc        29 Nov 25 21:59 wrapper_checkpoint.txt
[2025-11-25 21:59:40] -rw-r--r--. 1 boinc boinc     21443 Nov 25 21:59 stderr.txt
[2025-11-25 21:59:40] HITS file was successfully produced:
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc 915583164 Nov 25 21:56 shared/HITS.pool.root.1
[2025-11-25 21:59:40]  *** Contents of shared directory: ***
[2025-11-25 21:59:40] total 1306952
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc 407834112 Nov 24 21:28 ATLAS.root_0
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc    590102 Nov 24 21:28 input.tar.gz
[2025-11-25 21:59:40] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:28 start_atlas.sh
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc 915583164 Nov 25 21:56 HITS.pool.root.1
[2025-11-25 21:59:40] -rw-------. 1 boinc boinc  14284800 Nov 25 21:59 result.tar.gz
21:59:42 (25297): run_atlas exited; CPU time 338938.210371
21:59:42 (25297): called boinc_finish(0)

</stderr_txt>
]]>

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