Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:20:08 (1653272): wrapper (7.7.26015): starting
23:20:08 (1653272): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 23:20:08] Arguments: --nthreads 3
[2025-11-24 23:20:08] Threads: 3
[2025-11-24 23:20:08] Checking for CVMFS
[2025-11-24 23:20:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:20:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:20:08] 2.9.2.0 1581621 510 54640 153261 2 81 14592915 36864001 0 130560 0 183542 99.977 18567 29193 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 23:20:08] CVMFS is ok
[2025-11-24 23:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:20:08] Further information can be found at the LHC@home message board.
[2025-11-24 23:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:20:08] Checking for apptainer binary...
[2025-11-24 23:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:20:08] Running /usr/bin/apptainer --version
[2025-11-24 23:20:08] apptainer version 1.4.1-1.1
[2025-11-24 23:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:20:08] thA359
[2025-11-24 23:20:08] apptainer works
[2025-11-24 23:20:08] Set ATHENA_PROC_NUMBER=3
[2025-11-24 23:20:08] Set ATHENA_CORE_NUMBER=3
[2025-11-24 23:20:08] Starting ATLAS job with PandaID=6894283547
[2025-11-24 23:20:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:35:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:35:02] 2025-11-25 06:34:15,048 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:35:02] 2025-11-25 06:34:15,048 | INFO     | sum of square deviations: 35594704597.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,050 | INFO     | sum of deviations: 233698952173.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,050 | INFO     | mean x: 1764037626.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,050 | INFO     | mean y: 2197305.5781893004
[2025-11-25 07:35:02] 2025-11-25 06:34:15,050 | INFO     | intersect: -11579686841.77986
[2025-11-25 07:35:02] 2025-11-25 06:34:15,051 | INFO     | chi2: 3.090313735837803
[2025-11-25 07:35:02] 2025-11-25 06:34:15,051 | INFO     | sum of square deviations: 34507363280.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | sum of deviations: 279141315662.00006
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | sufficient remaining disk space (242593300480 B)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | mean x: 1764037474.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | mean y: 2203644.9313929314
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | intersect: -14267670798.208942
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | chi2: 2.2670788911394952
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | current chi2=2.2670788911394952 (change=26.639199611075213 %)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,053 | INFO     | sum of square deviations: 33442394475.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,055 | INFO     | sum of deviations: 273903551363.49985
[2025-11-25 07:35:02] 2025-11-25 06:34:15,055 | INFO     | mean x: 1764037321.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,055 | INFO     | mean y: 2202894.850840336
[2025-11-25 07:35:02] 2025-11-25 06:34:15,055 | INFO     | intersect: -14445808220.435965
[2025-11-25 07:35:02] 2025-11-25 06:34:15,056 | INFO     | chi2: 2.266432322267724
[2025-11-25 07:35:02] 2025-11-25 06:34:15,056 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,056 | INFO     | current chi2=2.266432322267724 (change=0.028519910546482407 %)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,056 | INFO     | right removable region: 475
[2025-11-25 07:35:02] 2025-11-25 06:34:15,056 | INFO     | sum of square deviations: 34507363280.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,058 | INFO     | sum of deviations: 133806346259.99998
[2025-11-25 07:35:02] 2025-11-25 06:34:15,058 | INFO     | mean x: 1764037779.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,058 | INFO     | mean y: 2211295.0166320167
[2025-11-25 07:35:02] 2025-11-25 06:34:15,058 | INFO     | intersect: -6838051983.209572
[2025-11-25 07:35:02] 2025-11-25 06:34:15,058 | INFO     | chi2: 1.0595704028314779
[2025-11-25 07:35:02] 2025-11-25 06:34:15,059 | INFO     | current chi2=1.0595704028314779 (change=65.71317693269025 %)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,059 | INFO     | sum of square deviations: 33442394475.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | sum of deviations: 110498024006.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | mean x: 1764037931.5
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | mean y: 2214619.1281512603
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | intersect: -5826396303.124408
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | chi2: 0.9026780903915403
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | current chi2=0.9026780903915403 (change=14.807162602945118 %)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | left removable region: 20
[2025-11-25 07:35:02] 2025-11-25 06:34:15,061 | INFO     | sum of square deviations: 29208584860.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | sum of deviations: 136632537076.99998
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | mean x: 1764037901.0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | mean y: 2222896.5362637364
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | intersect: -8249630970.019588
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | chi2: 0.07247576967800647
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | current memory leak: 4.68 B/s (using 455 data points, chi2=0.07)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,063 | INFO     | could have reported an average CPU frequency of 3909 MHz (20 samples)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | ..............................
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . Timing measurements:
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . get job = 0 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . initial setup = 1 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . payload setup = 3 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . stage-in = 0 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . payload execution = 29614 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . stage-out = 1 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | . log creation = 0 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,064 | INFO     | ..............................
[2025-11-25 07:35:02] 2025-11-25 06:34:15,094 | INFO     | 
[2025-11-25 07:35:02] 2025-11-25 06:34:15,094 | INFO     | job summary report
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | --------------------------------------------------
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | PanDA job id: 6894283547
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | task id: 47533967
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | errors: (none)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | pilot state: finished 
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | transexitcode: 0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | exeerrorcode: 0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | exeerrordiag: 
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | exitcode: 0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | exitmsg: OK
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | cpuconsumptiontime: 87544 s
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | nevents: 1000
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | neventsw: 0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | pid: 1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | pgrp: 1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | corecount: 3
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | event service: False
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | sizes: {0: 2284312, 2: 2284574, 10: 2284602, 29621: 2323815, 29622: 2332871, 29627: 2333061}
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | --------------------------------------------------
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | 
[2025-11-25 07:35:02] 2025-11-25 06:34:15,095 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 07:35:02] 2025-11-25 06:34:15,099 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6894283547: 4879439 B (within 2537553920 B limit)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,099 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6894283547/HITS.47533967._003203.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,099 | INFO     | total size of present files: 0 B (workdir size: 4879439 B)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,099 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6894283547/HITS.47533967._003203.pool.root.1 since it does not exist
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:35:02] 2025-11-25 06:34:15,108 | INFO     | job 6894283547 has completed (purged errors)
[2025-11-25 07:35:02] 2025-11-25 06:34:15,108 | INFO     | overall cleanup function is called
[2025-11-25 07:35:02] 2025-11-25 06:34:15,151 | INFO     | number of running child processes to parent process 1663449: 1
[2025-11-25 07:35:02] 2025-11-25 06:34:15,151 | INFO     | maximum number of monitored processes: 8
[2025-11-25 07:35:02] 2025-11-25 06:34:15,151 | INFO     | aborting job monitoring since job object (job id=6894283547) has expired
[2025-11-25 07:35:02] 2025-11-25 06:34:16,117 | INFO     | --- collectZombieJob: --- 10, [1663449]
[2025-11-25 07:35:02] 2025-11-25 06:34:16,117 | INFO     | zombie collector waiting for pid 1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:16,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:35:02] 2025-11-25 06:34:16,117 | INFO     | collected zombie processes
[2025-11-25 07:35:02] 2025-11-25 06:34:16,117 | INFO     | will attempt to kill all subprocesses of pid=1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:16,166 | INFO     | process IDs to be killed: [1663449] (in reverse order)
[2025-11-25 07:35:02] 2025-11-25 06:34:16,192 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:35:02] 2025-11-25 06:34:16,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:35:02] 2025-11-25 06:34:16,194 | INFO     | did not find any defunct processes belonging to 1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:16,195 | INFO     | did not find any defunct processes belonging to 1663449
[2025-11-25 07:35:02] 2025-11-25 06:34:16,195 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:35:02] 2025-11-25 06:34:16,195 | INFO     | ready for new job
[2025-11-25 07:35:02] 2025-11-25 06:34:16,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:35:02] 2025-11-25 06:34:16,196 | INFO     | ***************************************
[2025-11-25 07:35:02] 2025-11-25 06:34:16,197 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:35:02] 2025-11-25 06:34:16,197 | INFO     | ***************************************
[2025-11-25 07:35:02] 2025-11-25 06:34:16,197 | INFO     | 
[2025-11-25 07:35:02] 2025-11-25 06:34:16,197 | INFO     | architecture information:
[2025-11-25 07:35:02] 2025-11-25 06:34:16,197 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:35:02] 2025-11-25 06:34:16,206 | INFO     | cat /etc/os-release:
[2025-11-25 07:35:02] NAME="CentOS Linux"
[2025-11-25 07:35:02] VERSION="7 (Core)"
[2025-11-25 07:35:02] ID="centos"
[2025-11-25 07:35:02] ID_LIKE="rhel fedora"
[2025-11-25 07:35:02] VERSION_ID="7"
[2025-11-25 07:35:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:35:02] ANSI_COLOR="0;31"
[2025-11-25 07:35:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:35:02] HOME_URL="https://www.centos.org/"
[2025-11-25 07:35:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:35:02] 
[2025-11-25 07:35:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:35:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:35:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:35:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:35:02] 
[2025-11-25 07:35:02] 2025-11-25 06:34:16,206 | INFO     | ***************************************
[2025-11-25 07:35:02] 2025-11-25 06:34:16,709 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | INFO     | sufficient remaining disk space (242602737664 B)
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | INFO     | update_server=False
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:35:02] 2025-11-25 06:34:16,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:35:02] 2025-11-25 06:34:16,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:35:02] 2025-11-25 06:34:16,722 | INFO     | aborting loop
[2025-11-25 07:35:02] 2025-11-25 06:34:16,868 | INFO     | all job control threads have been joined
[2025-11-25 07:35:02] 2025-11-25 06:34:17,191 | INFO     | all payload control threads have been joined
[2025-11-25 07:35:02] 2025-11-25 06:34:17,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:35:02] 2025-11-25 06:34:17,727 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:17,727 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:17,727 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:17,794 | INFO     | all data control threads have been joined
[2025-11-25 07:35:02] 2025-11-25 06:34:17,870 | INFO     | [job] control thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,095 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,197 | INFO     | [payload] control thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,229 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,404 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,663 | INFO     | [job] validate thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,683 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,687 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:18,800 | INFO     | [data] control thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:19,041 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:19,465 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:19,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:35:02] 2025-11-25 06:34:23,990 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:27,329 | INFO     | job.realtimelogging is not enabled
[2025-11-25 07:35:02] 2025-11-25 06:34:28,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:35:02] 2025-11-25 06:34:46,456 | INFO     | PID=1656996 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:35:02] 2025-11-25 06:34:46,456 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:35:02] 2025-11-25 06:34:46,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:35:02] 2025-11-25 06:34:46,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:35:02] 2025-11-25 06:34:56,749 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:35:02] 2025-11-25 06:34:57,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405036824384)>', '<ExcThread(monitor, started 140404418668288)>']
[2025-11-25 07:35:02] 2025-11-25 06:34:57,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:35:02] 2025-11-25 06:34:57,515 | INFO     | [monitor] control thread has ended
[2025-11-25 07:35:02] 2025-11-25 06:35:02,528 | INFO     | all workflow threads have been joined
[2025-11-25 07:35:02] 2025-11-25 06:35:02,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:35:02] 2025-11-25 06:35:02,529 | INFO     | traces error code: 0
[2025-11-25 07:35:02] 2025-11-25 06:35:02,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:35:02] 2025-11-25 06:35:02,582 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:35:02] 2025-11-25 06:35:02,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:35:02] 2025-11-25 06:35:02,587 [wrapper] pilotpid: 1656996
[2025-11-25 07:35:02] 2025-11-25 06:35:02,589 [wrapper] Pilot exit status: 0
[2025-11-25 07:35:02] 2025-11-25 06:35:02,596 [wrapper] pandaids: 6894283547
[2025-11-25 07:35:02] 2025-11-25 06:35:02,614 [wrapper] cleanup supervisor_pilot 1715550 1656997
[2025-11-25 07:35:02] 2025-11-25 06:35:02,616 [wrapper] Test setup, not cleaning
[2025-11-25 07:35:02] 2025-11-25 06:35:02,618 [wrapper] apfmon messages muted
[2025-11-25 07:35:02] 2025-11-25 06:35:02,621 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:35:02] 2025-11-25 06:35:02,623 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:35:02]  *** Error codes and diagnostics ***
[2025-11-25 07:35:02]     "exeErrorCode": 0,
[2025-11-25 07:35:02]     "exeErrorDiag": "",
[2025-11-25 07:35:02]     "pilotErrorCode": 0,
[2025-11-25 07:35:02]     "pilotErrorDiag": "",
[2025-11-25 07:35:02]  *** Listing of results directory ***
[2025-11-25 07:35:02] total 1313140
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc    576529 Nov 21 10:12 pilot3.tar.gz
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc      5112 Nov 21 10:22 queuedata.json
[2025-11-25 07:35:02] -rwx------ 1 boinc boinc     36292 Nov 21 10:23 runpilot2-wrapper.sh
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc       100 Nov 24 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:35:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 23:20 run_atlas
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc       105 Nov 24 23:20 job.xml
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc 409584061 Nov 24 23:20 EVNT.47493127._002349.pool.root.1
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc    590105 Nov 24 23:20 input.tar.gz
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:20 start_atlas.sh
[2025-11-25 07:35:02] drwxrwx--x 2 boinc boinc      4096 Nov 24 23:20 shared
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:20 boinc_setup_complete
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc      6440 Nov 24 23:20 init_data.xml
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:20 boinc_lockfile
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc      2785 Nov 24 23:20 pandaJob.out
[2025-11-25 07:35:02] -rw------- 1 boinc boinc    991801 Nov 24 23:20 agis_schedconf.cvmfs.json
[2025-11-25 07:35:02] drwx------ 5 boinc boinc      4096 Nov 24 23:20 pilot3
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc       531 Nov 25 07:29 boinc_task_state.xml
[2025-11-25 07:35:02] -rw------- 1 boinc boinc        95 Nov 25 07:33 pilot_heartbeat.json
[2025-11-25 07:35:02] -rw------- 1 boinc boinc 920455661 Nov 25 07:33 HITS.47533967._003203.pool.root.1
[2025-11-25 07:35:02] -rw------- 1 boinc boinc      1027 Nov 25 07:34 memory_monitor_summary.json
[2025-11-25 07:35:02] -rw------- 1 boinc boinc   1516227 Nov 25 07:34 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:35:02] -rw------- 1 boinc boinc   1177797 Nov 25 07:34 log.47533967._003203.job.log.tgz.1
[2025-11-25 07:35:02] -rw------- 1 boinc boinc      8573 Nov 25 07:34 heartbeat.json
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc      8192 Nov 25 07:34 boinc_mmap_file
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc        28 Nov 25 07:34 wrapper_checkpoint.txt
[2025-11-25 07:35:02] -rw------- 1 boinc boinc      4824 Nov 25 07:35 pilotlog.txt
[2025-11-25 07:35:02] -rw------- 1 boinc boinc   4170996 Nov 25 07:35 log.47533967._003203.job.log.1
[2025-11-25 07:35:02] -rw------- 1 boinc boinc       353 Nov 25 07:35 output.list
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc       620 Nov 25 07:35 runtime_log
[2025-11-25 07:35:02] -rw------- 1 boinc boinc   5365760 Nov 25 07:35 result.tar.gz
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc      8898 Nov 25 07:35 runtime_log.err
[2025-11-25 07:35:02] -rw------- 1 boinc boinc       665 Nov 25 07:35 DpELDm9Xcg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHFJKDmEorQum.diag
[2025-11-25 07:35:02] -rw-r--r-- 1 boinc boinc     21453 Nov 25 07:35 stderr.txt
[2025-11-25 07:35:02] HITS file was successfully produced:
[2025-11-25 07:35:02] -rw------- 1 boinc boinc 920455661 Nov 25 07:33 shared/HITS.pool.root.1
[2025-11-25 07:35:02]  *** Contents of shared directory: ***
[2025-11-25 07:35:02] total 1304716
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc 409584061 Nov 24 23:20 ATLAS.root_0
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc    590105 Nov 24 23:20 input.tar.gz
[2025-11-25 07:35:02] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:20 start_atlas.sh
[2025-11-25 07:35:02] -rw------- 1 boinc boinc 920455661 Nov 25 07:33 HITS.pool.root.1
[2025-11-25 07:35:02] -rw------- 1 boinc boinc   5365760 Nov 25 07:35 result.tar.gz
07:35:03 (1653272): run_atlas exited; CPU time 87592.446669
07:35:03 (1653272): called boinc_finish(0)

</stderr_txt>
]]>

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