Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:24:29 (23948): wrapper (7.7.26015): starting
01:24:29 (23948): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:24:29] Arguments: --nthreads 8
[2025-11-25 01:24:29] Threads: 8
[2025-11-25 01:24:29] Checking for CVMFS
[2025-11-25 01:24:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:24:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:24:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:24:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:24:31] 2.11.2.0 10419 83100 117452 153264 0 84 16879331 25165825 4632 130560 14 27053852 99.875 13984778 1476 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 01:24:31] CVMFS is ok
[2025-11-25 01:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:24:31] Checking for apptainer binary...
[2025-11-25 01:24:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:24:31] Running /usr/bin/apptainer --version
[2025-11-25 01:24:31] apptainer version 1.3.2-1.el7
[2025-11-25 01:24:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:24:49] cg-vwn422.simple-grid.lan
[2025-11-25 01:24:49] apptainer works
[2025-11-25 01:24:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:24:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:24:49] Starting ATLAS job with PandaID=6894283537
[2025-11-25 01:24:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:59:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:59:25] 2025-11-26 01:58:20,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:59:25] 2025-11-26 01:58:22,099 | INFO     | time since job start (91782s) is within the limit (172800.0s)
[2025-11-26 02:59:25] 2025-11-26 01:58:23,382 | INFO     | monitor loop #6138: job 0:6894283537 is in state 'finished'
[2025-11-26 02:59:25] 2025-11-26 01:58:23,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:59:25] 2025-11-26 01:58:24,105 | INFO     | time since job start (91784s) is within the limit (172800.0s)
[2025-11-26 02:59:25] 2025-11-26 01:58:25,888 | INFO     | monitor loop #6139: job 0:6894283537 is in state 'finished'
[2025-11-26 02:59:25] 2025-11-26 01:58:25,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:59:25] 2025-11-26 01:58:26,111 | INFO     | time since job start (91786s) is within the limit (172800.0s)
[2025-11-26 02:59:25] 2025-11-26 01:58:28,117 | INFO     | time since job start (91788s) is within the limit (172800.0s)
[2025-11-26 02:59:25] 2025-11-26 01:58:28,395 | INFO     | monitor loop #6140: job 0:6894283537 is in state 'finished'
[2025-11-26 02:59:25] 2025-11-26 01:58:28,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:59:25] 2025-11-26 01:58:30,123 | INFO     | time since job start (91790s) is within the limit (172800.0s)
[2025-11-26 02:59:25] 2025-11-26 01:58:30,900 | INFO     | monitor loop #6141: job 0:6894283537 is in state 'finished'
[2025-11-26 02:59:25] 2025-11-26 01:58:30,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,083 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:59:25] 2025-11-26 01:58:31,084 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 02:59:25] 2025-11-26 01:58:31,085 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894283537/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,086 | INFO     | extracted standard info from prmon json
[2025-11-26 02:59:25] 2025-11-26 01:58:31,086 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:59:25] 2025-11-26 01:58:31,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:59:25] 2025-11-26 01:58:31,114 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:59:25] 2025-11-26 01:58:31,117 | INFO     | sum of square deviations: 1038179628663.6298
[2025-11-26 02:59:25] 2025-11-26 01:58:31,212 | INFO     | sum of deviations: 3747026118733.266
[2025-11-26 02:59:25] 2025-11-26 01:58:31,213 | INFO     | mean x: 1764076654.7974598
[2025-11-26 02:59:25] 2025-11-26 01:58:31,213 | INFO     | mean y: 2845260.756684492
[2025-11-26 02:59:25] 2025-11-26 01:58:31,213 | INFO     | intersect: -6364108124.258486
[2025-11-26 02:59:25] 2025-11-26 01:58:31,215 | INFO     | chi2: 23.791146109527997
[2025-11-26 02:59:25] 2025-11-26 01:58:31,218 | INFO     | sum of square deviations: 1027805402880.1855
[2025-11-26 02:59:25] 2025-11-26 01:58:31,359 | INFO     | sum of deviations: 4235510949248.9214
[2025-11-26 02:59:25] 2025-11-26 01:58:31,365 | INFO     | mean x: 1764076502.301811
[2025-11-26 02:59:25] 2025-11-26 01:58:31,366 | INFO     | mean y: 2852440.1757209925
[2025-11-26 02:59:25] 2025-11-26 01:58:31,366 | INFO     | intersect: -7266777900.231301
[2025-11-26 02:59:25] 2025-11-26 01:58:31,368 | INFO     | chi2: 20.671031389125112
[2025-11-26 02:59:25] 2025-11-26 01:58:31,368 | INFO     | current chi2=20.671031389125112 (change=13.114604508915717 %)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,368 | INFO     | right removable region: 1490
[2025-11-26 02:59:25] 2025-11-26 01:58:31,370 | INFO     | sum of square deviations: 1027804218870.185
[2025-11-26 02:59:25] 2025-11-26 01:58:31,509 | INFO     | PID=27688 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:59:25] 2025-11-26 01:58:31,509 | INFO     | .. there are 9 such processes running
[2025-11-26 02:59:25] 2025-11-26 01:58:31,523 | INFO     | sum of deviations: 3118930689999.7153
[2025-11-26 02:59:25] 2025-11-26 01:58:31,524 | INFO     | mean x: 1764076807.301811
[2025-11-26 02:59:25] 2025-11-26 01:58:31,524 | INFO     | mean y: 2854492.362843729
[2025-11-26 02:59:25] 2025-11-26 01:58:31,524 | INFO     | intersect: -5350337480.188552
[2025-11-26 02:59:25] 2025-11-26 01:58:31,526 | INFO     | chi2: 19.075129830167153
[2025-11-26 02:59:25] 2025-11-26 01:58:31,526 | INFO     | current chi2=19.075129830167153 (change=19.822568688576755 %)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,526 | INFO     | left removable region: 10
[2025-11-26 02:59:25] 2025-11-26 01:58:31,528 | INFO     | sum of square deviations: 1005223523172.405
[2025-11-26 02:59:25] 2025-11-26 01:58:31,597 | INFO     | sum of deviations: 3172701775504.5713
[2025-11-26 02:59:25] 2025-11-26 01:58:31,597 | INFO     | mean x: 1764076776.8114865
[2025-11-26 02:59:25] 2025-11-26 01:58:31,598 | INFO     | mean y: 2871402.6722972975
[2025-11-26 02:59:25] 2025-11-26 01:58:31,598 | INFO     | intersect: -5564934555.80035
[2025-11-26 02:59:25] 2025-11-26 01:58:31,600 | INFO     | chi2: 11.76680813006275
[2025-11-26 02:59:25] 2025-11-26 01:58:31,600 | INFO     | current memory leak: 3.16 B/s (using 1480 data points, chi2=11.77)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | ..............................
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . Timing measurements:
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . get job = 0 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . initial setup = 12 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . payload setup = 170 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . stage-in = 0 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,602 | INFO     | . payload execution = 91371 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,603 | INFO     | . stage-out = 5 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,603 | INFO     | . log creation = 2 s
[2025-11-26 02:59:25] 2025-11-26 01:58:31,603 | INFO     | ..............................
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | 
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | job summary report
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | --------------------------------------------------
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | PanDA job id: 6894283537
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | task id: 47533967
[2025-11-26 02:59:25] 2025-11-26 01:58:32,120 | INFO     | errors: (none)
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | pilot state: finished 
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | transexitcode: 0
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | exeerrorcode: 0
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | exeerrordiag: 
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | exitcode: 0
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | exitmsg: OK
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | cpuconsumptiontime: 342763 s
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | nevents: 1000
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | neventsw: 0
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | pid: 1862
[2025-11-26 02:59:25] 2025-11-26 01:58:32,121 | INFO     | pgrp: 1862
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | corecount: 8
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | event service: False
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | sizes: {0: 2283482, 1: 2284083, 2: 2284195, 3: 2284366, 14: 2284394, 25: 2284422, 35: 2284578, 46: 2284606, 57: 2284634, 68: 2284662, 78: 2284690, 89: 2285026, 94:
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | --------------------------------------------------
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | 
[2025-11-26 02:59:25] 2025-11-26 01:58:32,122 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-26 02:59:25] 2025-11-26 01:58:32,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:59:25] 2025-11-26 01:58:32,156 | INFO     | job 6894283537 has completed (purged errors)
[2025-11-26 02:59:25] 2025-11-26 01:58:32,156 | INFO     | overall cleanup function is called
[2025-11-26 02:59:25] 2025-11-26 01:58:33,173 | INFO     | --- collectZombieJob: --- 10, [1862]
[2025-11-26 02:59:25] 2025-11-26 01:58:33,173 | INFO     | zombie collector waiting for pid 1862
[2025-11-26 02:59:25] 2025-11-26 01:58:33,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:59:25] 2025-11-26 01:58:33,173 | INFO     | collected zombie processes
[2025-11-26 02:59:25] 2025-11-26 01:58:33,173 | INFO     | will attempt to kill all subprocesses of pid=1862
[2025-11-26 02:59:25] 2025-11-26 01:58:33,279 | INFO     | process IDs to be killed: [1862] (in reverse order)
[2025-11-26 02:59:25] 2025-11-26 01:58:33,371 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:59:25] 2025-11-26 01:58:33,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:59:25] 2025-11-26 01:58:33,375 | INFO     | did not find any defunct processes belonging to 1862
[2025-11-26 02:59:25] 2025-11-26 01:58:33,378 | INFO     | did not find any defunct processes belonging to 1862
[2025-11-26 02:59:25] 2025-11-26 01:58:33,379 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:59:25] 2025-11-26 01:58:33,380 | INFO     | ready for new job
[2025-11-26 02:59:25] 2025-11-26 01:58:33,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:59:25] 2025-11-26 01:58:33,385 | INFO     | ***************************************
[2025-11-26 02:59:25] 2025-11-26 01:58:33,386 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:59:25] 2025-11-26 01:58:33,386 | INFO     | ***************************************
[2025-11-26 02:59:25] 2025-11-26 01:58:33,386 | INFO     | 
[2025-11-26 02:59:25] 2025-11-26 01:58:33,386 | INFO     | pilot is running in a VM
[2025-11-26 02:59:25] 2025-11-26 01:58:33,387 | INFO     | architecture information:
[2025-11-26 02:59:25] 2025-11-26 01:58:33,387 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:59:25] 2025-11-26 01:58:33,434 | INFO     | cat /etc/os-release:
[2025-11-26 02:59:25] NAME="CentOS Linux"
[2025-11-26 02:59:25] VERSION="7 (Core)"
[2025-11-26 02:59:25] ID="centos"
[2025-11-26 02:59:25] ID_LIKE="rhel fedora"
[2025-11-26 02:59:25] VERSION_ID="7"
[2025-11-26 02:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:59:25] ANSI_COLOR="0;31"
[2025-11-26 02:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:59:25] HOME_URL="https://www.centos.org/"
[2025-11-26 02:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:59:25] 
[2025-11-26 02:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:59:25] 
[2025-11-26 02:59:25] 2025-11-26 01:58:33,435 | INFO     | ***************************************
[2025-11-26 02:59:25] 2025-11-26 01:58:33,937 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-26 02:59:25] 2025-11-26 01:58:33,993 | INFO     | sufficient remaining disk space (494666776576 B)
[2025-11-26 02:59:25] 2025-11-26 01:58:33,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:59:25] 2025-11-26 01:58:33,994 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:59:25] 2025-11-26 01:58:33,994 | INFO     | update_server=False
[2025-11-26 02:59:25] 2025-11-26 01:58:33,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:59:25] 2025-11-26 01:58:33,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:59:25] 2025-11-26 01:58:34,208 | INFO     | all data control threads have been joined
[2025-11-26 02:59:25] 2025-11-26 01:58:34,301 | INFO     | all payload control threads have been joined
[2025-11-26 02:59:25] 2025-11-26 01:58:34,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:59:25] 2025-11-26 01:58:34,410 | INFO     | aborting loop
[2025-11-26 02:59:25] 2025-11-26 01:58:34,999 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,166 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,213 | INFO     | [data] control thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,294 | INFO     | all job control threads have been joined
[2025-11-26 02:59:25] 2025-11-26 01:58:35,307 | INFO     | [payload] control thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,379 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,415 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,434 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,726 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:35,905 | INFO     | [job] validate thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:36,000 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:36,146 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:36,300 | INFO     | [job] control thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:36,392 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:36,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:59:25] 2025-11-26 01:58:37,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:59:25] 2025-11-26 01:58:37,756 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:58:41,065 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:59:25] 2025-11-26 01:59:03,723 | INFO     | PID=27688 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:59:25] 2025-11-26 01:59:03,723 | INFO     | .. there are 9 such processes running
[2025-11-26 02:59:25] 2025-11-26 01:59:03,725 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:59:25] 2025-11-26 01:59:03,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:59:25] 2025-11-26 01:59:03,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:59:25] 2025-11-26 01:59:19,551 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:59:25] 2025-11-26 01:59:20,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966465746752)>', '<ExcThread(monitor, started 139965719631616)>']
[2025-11-26 02:59:25] 2025-11-26 01:59:21,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:59:25] 2025-11-26 01:59:21,010 | INFO     | [monitor] control thread has ended
[2025-11-26 02:59:25] 2025-11-26 01:59:25,185 | INFO     | all workflow threads have been joined
[2025-11-26 02:59:25] 2025-11-26 01:59:25,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:59:25] 2025-11-26 01:59:25,185 | INFO     | traces error code: 0
[2025-11-26 02:59:25] 2025-11-26 01:59:25,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:59:25] 2025-11-26 01:59:25,353 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:59:25] 2025-11-26 01:59:25,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:59:25] 2025-11-26 01:59:25,361 [wrapper] pilotpid: 27688
[2025-11-26 02:59:25] 2025-11-26 01:59:25,363 [wrapper] Pilot exit status: 0
[2025-11-26 02:59:25] 2025-11-26 01:59:25,389 [wrapper] pandaids: 6894283537
[2025-11-26 02:59:25] 2025-11-26 01:59:25,426 [wrapper] cleanup supervisor_pilot  8642 27689
[2025-11-26 02:59:25] 2025-11-26 01:59:25,522 [wrapper] Test setup, not cleaning
[2025-11-26 02:59:25] 2025-11-26 01:59:25,550 [wrapper] apfmon messages muted
[2025-11-26 02:59:25] 2025-11-26 01:59:25,553 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:59:25] 2025-11-26 01:59:25,557 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:59:25]  *** Error codes and diagnostics ***
[2025-11-26 02:59:25]     "exeErrorCode": 0,
[2025-11-26 02:59:25]     "exeErrorDiag": "",
[2025-11-26 02:59:25]     "pilotErrorCode": 0,
[2025-11-26 02:59:25]     "pilotErrorDiag": "",
[2025-11-26 02:59:25]  *** Listing of results directory ***
[2025-11-26 02:59:25] total 1340552
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc    576529 Nov 21 10:12 pilot3.tar.gz
[2025-11-26 02:59:25] -rwx------. 1 boinc boinc     36292 Nov 21 10:19 runpilot2-wrapper.sh
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc      5112 Nov 21 10:19 queuedata.json
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc       100 Nov 25 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:59:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 01:24 run_atlas
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc       105 Nov 25 01:24 job.xml
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc      6391 Nov 25 01:24 init_data.xml
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc 411434970 Nov 25 01:24 EVNT.47493127._002348.pool.root.1
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:24 start_atlas.sh
[2025-11-26 02:59:25] drwxrwx--x. 2 boinc boinc        68 Nov 25 01:24 shared
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc    590101 Nov 25 01:24 input.tar.gz
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc         0 Nov 25 01:24 boinc_lockfile
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc      2786 Nov 25 01:24 pandaJob.out
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc    991801 Nov 25 01:28 agis_schedconf.cvmfs.json
[2025-11-26 02:59:25] drwx------. 5 boinc boinc      4096 Nov 25 01:28 pilot3
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:34 boinc_task_state.xml
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc 927879135 Nov 26 02:56 HITS.47533967._003193.pool.root.1
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc      1031 Nov 26 02:57 memory_monitor_summary.json
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc   1516240 Nov 26 02:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc   2564012 Nov 26 02:57 log.47533967._003193.job.log.tgz.1
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc      7945 Nov 26 02:58 heartbeat.json
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc        95 Nov 26 02:59 pilot_heartbeat.json
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:59 boinc_mmap_file
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:59 wrapper_checkpoint.txt
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc      4884 Nov 26 02:59 pilotlog.txt
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc  12191678 Nov 26 02:59 log.47533967._003193.job.log.1
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc       353 Nov 26 02:59 output.list
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:59 runtime_log
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc  14776320 Nov 26 02:59 result.tar.gz
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc       662 Nov 26 02:59 zcdMDmaTcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCVHKDmvnGlWo.diag
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc      8817 Nov 26 02:59 runtime_log.err
[2025-11-26 02:59:25] -rw-r--r--. 1 boinc boinc     21516 Nov 26 02:59 stderr.txt
[2025-11-26 02:59:25] HITS file was successfully produced:
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc 927879135 Nov 26 02:56 shared/HITS.pool.root.1
[2025-11-26 02:59:25]  *** Contents of shared directory: ***
[2025-11-26 02:59:25] total 1322952
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc 411434970 Nov 25 01:24 ATLAS.root_0
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:24 start_atlas.sh
[2025-11-26 02:59:25] -rw-r--r--. 2 boinc boinc    590101 Nov 25 01:24 input.tar.gz
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc 927879135 Nov 26 02:56 HITS.pool.root.1
[2025-11-26 02:59:25] -rw-------. 1 boinc boinc  14776320 Nov 26 02:59 result.tar.gz
02:59:27 (23948): run_atlas exited; CPU time 343261.513381
02:59:27 (23948): called boinc_finish(0)

</stderr_txt>
]]>

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