Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:01 (12091): wrapper (7.7.26015): starting
22:18:01 (12091): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:18:01] Arguments: --nthreads 8
[2025-11-21 22:18:01] Threads: 8
[2025-11-21 22:18:01] Checking for CVMFS
[2025-11-21 22:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:18:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:18:02] 2.11.2.0 2857 61326 86284 153156 2 81 11545127 20275201 1 130560 0 15914402 99.839 3577533 29286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 22:18:02] CVMFS is ok
[2025-11-21 22:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:18:02] Further information can be found at the LHC@home message board.
[2025-11-21 22:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:18:02] Checking for apptainer binary...
[2025-11-21 22:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:18:02] Running /usr/bin/apptainer --version
[2025-11-21 22:18:02] apptainer version 1.3.2-1.el7
[2025-11-21 22:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:18:04] c-204-10.aglt2.org
[2025-11-21 22:18:04] apptainer works
[2025-11-21 22:18:04] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:18:04] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:18:04] Starting ATLAS job with PandaID=6894283534
[2025-11-21 22:18:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:01:43]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:01:43] 2025-11-22 16:00:56,082 | INFO     | time since job start (45754s) is within the limit (172800.0s)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,088 | INFO     | time since job start (45756s) is within the limit (172800.0s)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,158 | INFO     | monitor loop #3367: job 0:6894283534 is in state 'finished'
[2025-11-22 11:01:43] 2025-11-22 16:00:58,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 11:01:43] 2025-11-22 16:00:58,854 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-22 11:01:43] 2025-11-22 16:00:58,857 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894283534/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,858 | INFO     | extracted standard info from prmon json
[2025-11-22 11:01:43] 2025-11-22 16:00:58,858 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:01:43] 2025-11-22 16:00:58,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:01:43] 2025-11-22 16:00:58,872 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:01:43] 2025-11-22 16:00:58,873 | INFO     | sum of square deviations: 130816932039.81859
[2025-11-22 11:01:43] 2025-11-22 16:00:58,885 | INFO     | sum of deviations: 792513341382.5236
[2025-11-22 11:01:43] 2025-11-22 16:00:58,885 | INFO     | mean x: 1763804380.0746667
[2025-11-22 11:01:43] 2025-11-22 16:00:58,886 | INFO     | mean y: 2865993.4906666665
[2025-11-22 11:01:43] 2025-11-22 16:00:58,886 | INFO     | intersect: -10682589482.354195
[2025-11-22 11:01:43] 2025-11-22 16:00:58,887 | INFO     | chi2: 6.398387942066434
[2025-11-22 11:01:43] 2025-11-22 16:00:58,888 | INFO     | sum of square deviations: 128218140345.65637
[2025-11-22 11:01:43] 2025-11-22 16:00:58,900 | INFO     | sum of deviations: 1065695704537.2535
[2025-11-22 11:01:43] 2025-11-22 16:00:58,900 | INFO     | mean x: 1763804227.5785234
[2025-11-22 11:01:43] 2025-11-22 16:00:58,900 | INFO     | mean y: 2882026.3033557045
[2025-11-22 11:01:43] 2025-11-22 16:00:58,900 | INFO     | intersect: -14657123054.941439
[2025-11-22 11:01:43] 2025-11-22 16:00:58,901 | INFO     | chi2: 2.72016342493795
[2025-11-22 11:01:43] 2025-11-22 16:00:58,901 | INFO     | current chi2=2.72016342493795 (change=57.486738072661446 %)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,902 | INFO     | sum of square deviations: 125654000463.97163
[2025-11-22 11:01:43] 2025-11-22 16:00:58,914 | INFO     | sum of deviations: 1135909886017.2573
[2025-11-22 11:01:43] 2025-11-22 16:00:58,914 | INFO     | mean x: 1763804075.0824325
[2025-11-22 11:01:43] 2025-11-22 16:00:58,914 | INFO     | mean y: 2886193.635135135
[2025-11-22 11:01:43] 2025-11-22 16:00:58,914 | INFO     | intersect: -15941870666.359333
[2025-11-22 11:01:43] 2025-11-22 16:00:58,915 | INFO     | chi2: 2.3122923744910024
[2025-11-22 11:01:43] 2025-11-22 16:00:58,915 | INFO     | current chi2=2.3122923744910024 (change=14.99435830610992 %)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,916 | INFO     | right removable region: 739
[2025-11-22 11:01:43] 2025-11-22 16:00:58,916 | INFO     | sum of square deviations: 128217877435.65651
[2025-11-22 11:01:43] 2025-11-22 16:00:58,929 | INFO     | sum of deviations: 590366004064.897
[2025-11-22 11:01:43] 2025-11-22 16:00:58,929 | INFO     | mean x: 1763804532.5785234
[2025-11-22 11:01:43] 2025-11-22 16:00:58,929 | INFO     | mean y: 2877836.5060402686
[2025-11-22 11:01:43] 2025-11-22 16:00:58,929 | INFO     | intersect: -8118378377.335794
[2025-11-22 11:01:43] 2025-11-22 16:00:58,930 | INFO     | chi2: 4.256416548027222
[2025-11-22 11:01:43] 2025-11-22 16:00:58,930 | INFO     | current chi2=4.256416548027222 (change=33.47673528759867 %)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,931 | INFO     | sum of square deviations: 125653520333.13515
[2025-11-22 11:01:43] 2025-11-22 16:00:58,944 | INFO     | sum of deviations: 541578659546.5403
[2025-11-22 11:01:43] 2025-11-22 16:00:58,944 | INFO     | mean x: 1763804685.0810812
[2025-11-22 11:01:43] 2025-11-22 16:00:58,944 | INFO     | mean y: 2880736.4243243244
[2025-11-22 11:01:43] 2025-11-22 16:00:58,944 | INFO     | intersect: -7599285717.134403
[2025-11-22 11:01:43] 2025-11-22 16:00:58,945 | INFO     | chi2: 4.19648062821643
[2025-11-22 11:01:43] 2025-11-22 16:00:58,945 | INFO     | current chi2=4.19648062821643 (change=1.4081309743655301 %)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,945 | INFO     | left removable region: 20
[2025-11-22 11:01:43] 2025-11-22 16:00:58,946 | INFO     | sum of square deviations: 115257022963.96364
[2025-11-22 11:01:43] 2025-11-22 16:00:58,957 | INFO     | sum of deviations: 820079432476.7222
[2025-11-22 11:01:43] 2025-11-22 16:00:58,958 | INFO     | mean x: 1763804654.5897079
[2025-11-22 11:01:43] 2025-11-22 16:00:58,958 | INFO     | mean y: 2905051.1515994435
[2025-11-22 11:01:43] 2025-11-22 16:00:58,958 | INFO     | intersect: -12546958574.84176
[2025-11-22 11:01:43] 2025-11-22 16:00:58,959 | INFO     | chi2: 0.06264428533172453
[2025-11-22 11:01:43] 2025-11-22 16:00:58,959 | INFO     | current memory leak: 7.12 B/s (using 719 data points, chi2=0.06)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,959 | INFO     | could have reported an average CPU frequency of 2166 MHz (29 samples)
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | ..............................
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . Timing measurements:
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . get job = 0 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . initial setup = 2 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . payload setup = 9 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . stage-in = 0 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . payload execution = 45711 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,960 | INFO     | . stage-out = 3 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,961 | INFO     | . log creation = 0 s
[2025-11-22 11:01:43] 2025-11-22 16:00:58,961 | INFO     | ..............................
[2025-11-22 11:01:43] 2025-11-22 16:00:59,170 | INFO     | 
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | job summary report
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | --------------------------------------------------
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | PanDA job id: 6894283534
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | task id: 47533967
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | errors: (none)
[2025-11-22 11:01:43] 2025-11-22 16:00:59,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:01:43] 2025-11-22 16:00:59,172 | INFO     | pilot state: finished 
[2025-11-22 11:01:43] 2025-11-22 16:00:59,172 | INFO     | transexitcode: 0
[2025-11-22 11:01:43] 2025-11-22 16:00:59,172 | INFO     | exeerrorcode: 0
[2025-11-22 11:01:43] 2025-11-22 16:00:59,172 | INFO     | exeerrordiag: 
[2025-11-22 11:01:43] 2025-11-22 16:00:59,172 | INFO     | exitcode: 0
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | exitmsg: OK
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | cpuconsumptiontime: 354106 s
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | nevents: 1000
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | neventsw: 0
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | pid: 23226
[2025-11-22 11:01:43] 2025-11-22 16:00:59,173 | INFO     | pgrp: 23226
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | corecount: 8
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | event service: False
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | sizes: {0: 2297979, 1: 2298835, 7: 2299097, 12: 2299125, 45723: 2345328, 45724: 2345327, 45728: 2354505, 45730: 2354561, 45739: 2354807}
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | --------------------------------------------------
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | 
[2025-11-22 11:01:43] 2025-11-22 16:00:59,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 11:01:43] 2025-11-22 16:00:59,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:01:43] 2025-11-22 16:00:59,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:01:43] 2025-11-22 16:00:59,210 | INFO     | job 6894283534 has completed (purged errors)
[2025-11-22 11:01:43] 2025-11-22 16:00:59,210 | INFO     | overall cleanup function is called
[2025-11-22 11:01:43] 2025-11-22 16:01:00,226 | INFO     | --- collectZombieJob: --- 10, [23226]
[2025-11-22 11:01:43] 2025-11-22 16:01:00,227 | INFO     | zombie collector waiting for pid 23226
[2025-11-22 11:01:43] 2025-11-22 16:01:00,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:01:43] 2025-11-22 16:01:00,227 | INFO     | collected zombie processes
[2025-11-22 11:01:43] 2025-11-22 16:01:00,227 | INFO     | will attempt to kill all subprocesses of pid=23226
[2025-11-22 11:01:43] 2025-11-22 16:01:00,318 | INFO     | process IDs to be killed: [23226] (in reverse order)
[2025-11-22 11:01:43] 2025-11-22 16:01:00,383 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:01:43] 2025-11-22 16:01:00,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:01:43] 2025-11-22 16:01:00,388 | INFO     | did not find any defunct processes belonging to 23226
[2025-11-22 11:01:43] 2025-11-22 16:01:00,391 | INFO     | did not find any defunct processes belonging to 23226
[2025-11-22 11:01:43] 2025-11-22 16:01:00,394 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:01:43] 2025-11-22 16:01:00,394 | INFO     | ready for new job
[2025-11-22 11:01:43] 2025-11-22 16:01:00,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:01:43] 2025-11-22 16:01:00,399 | INFO     | ***************************************
[2025-11-22 11:01:43] 2025-11-22 16:01:00,399 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:01:43] 2025-11-22 16:01:00,400 | INFO     | ***************************************
[2025-11-22 11:01:43] 2025-11-22 16:01:00,400 | INFO     | 
[2025-11-22 11:01:43] 2025-11-22 16:01:00,401 | INFO     | architecture information:
[2025-11-22 11:01:43] 2025-11-22 16:01:00,401 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:01:43] 2025-11-22 16:01:00,421 | INFO     | cat /etc/os-release:
[2025-11-22 11:01:43] NAME="CentOS Linux"
[2025-11-22 11:01:43] VERSION="7 (Core)"
[2025-11-22 11:01:43] ID="centos"
[2025-11-22 11:01:43] ID_LIKE="rhel fedora"
[2025-11-22 11:01:43] VERSION_ID="7"
[2025-11-22 11:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:01:43] ANSI_COLOR="0;31"
[2025-11-22 11:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:01:43] HOME_URL="https://www.centos.org/"
[2025-11-22 11:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:01:43] 
[2025-11-22 11:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:01:43] 
[2025-11-22 11:01:43] 2025-11-22 16:01:00,422 | INFO     | ***************************************
[2025-11-22 11:01:43] 2025-11-22 16:01:00,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 11:01:43] 2025-11-22 16:01:00,948 | INFO     | sufficient remaining disk space (17479761920 B)
[2025-11-22 11:01:43] 2025-11-22 16:01:00,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:01:43] 2025-11-22 16:01:00,949 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:01:43] 2025-11-22 16:01:00,949 | INFO     | update_server=False
[2025-11-22 11:01:43] 2025-11-22 16:01:00,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:01:43] 2025-11-22 16:01:00,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:01:43] 2025-11-22 16:01:00,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:01:43] 2025-11-22 16:01:01,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:01:43] 2025-11-22 16:01:01,628 | INFO     | all job control threads have been joined
[2025-11-22 11:01:43] 2025-11-22 16:01:01,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:01:43] 2025-11-22 16:01:01,667 | INFO     | aborting loop
[2025-11-22 11:01:43] 2025-11-22 16:01:01,811 | INFO     | all payload control threads have been joined
[2025-11-22 11:01:43] 2025-11-22 16:01:01,955 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:01,955 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,034 | INFO     | all data control threads have been joined
[2025-11-22 11:01:43] 2025-11-22 16:01:02,098 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,260 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,488 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,513 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,575 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,634 | INFO     | [job] control thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,672 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,742 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:02,816 | INFO     | [payload] control thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:03,040 | INFO     | [data] control thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:03,110 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:03,410 | INFO     | [job] validate thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:04,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:01:43] 2025-11-22 16:01:31,310 | INFO     | PID=15879 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 11:01:43] 2025-11-22 16:01:31,311 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:01:43] 2025-11-22 16:01:31,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:01:43] 2025-11-22 16:01:31,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:01:43] 2025-11-22 16:01:37,891 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:01:43] 2025-11-22 16:01:38,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764026996544)>', '<ExcThread(monitor, started 139763579340544)>']
[2025-11-22 11:01:43] 2025-11-22 16:01:38,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:01:43] 2025-11-22 16:01:38,343 | INFO     | [monitor] control thread has ended
[2025-11-22 11:01:43] 2025-11-22 16:01:43,129 | INFO     | all workflow threads have been joined
[2025-11-22 11:01:43] 2025-11-22 16:01:43,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:01:43] 2025-11-22 16:01:43,130 | INFO     | traces error code: 0
[2025-11-22 11:01:43] 2025-11-22 16:01:43,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:01:43] 2025-11-22 16:01:43,253 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:01:43] 2025-11-22 16:01:43,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:01:43] 2025-11-22 16:01:43,262 [wrapper] pilotpid: 15879
[2025-11-22 11:01:43] 2025-11-22 16:01:43,268 [wrapper] Pilot exit status: 0
[2025-11-22 11:01:43] 2025-11-22 16:01:43,285 [wrapper] pandaids: 6894283534
[2025-11-22 11:01:43] 2025-11-22 16:01:43,337 [wrapper] cleanup supervisor_pilot  9592 15880
[2025-11-22 11:01:43] 2025-11-22 16:01:43,342 [wrapper] Test setup, not cleaning
[2025-11-22 11:01:43] 2025-11-22 16:01:43,347 [wrapper] apfmon messages muted
[2025-11-22 11:01:43] 2025-11-22 16:01:43,351 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:01:43] 2025-11-22 16:01:43,355 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:01:43]  *** Error codes and diagnostics ***
[2025-11-22 11:01:43]     "exeErrorCode": 0,
[2025-11-22 11:01:43]     "exeErrorDiag": "",
[2025-11-22 11:01:43]     "pilotErrorCode": 0,
[2025-11-22 11:01:43]     "pilotErrorDiag": "",
[2025-11-22 11:01:43]  *** Listing of results directory ***
[2025-11-22 11:01:43] total 1309116
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 04:12 pilot3.tar.gz
[2025-11-22 11:01:43] -rwx------ 1 boincer umatlas     36292 Nov 21 04:19 runpilot2-wrapper.sh
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 04:19 queuedata.json
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas       100 Nov 21 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:01:43] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 22:17 run_atlas
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas       105 Nov 21 22:17 job.xml
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas 408745298 Nov 21 22:18 EVNT.47493127._002347.pool.root.1
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 22:18 start_atlas.sh
[2025-11-22 11:01:43] drwxrwx--x 2 boincer umatlas      4096 Nov 21 22:18 shared
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas    590105 Nov 21 22:18 input.tar.gz
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas         0 Nov 21 22:18 boinc_lockfile
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 22:18 pandaJob.out
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas        57 Nov 21 22:18 setup.sh.local
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas    989776 Nov 21 22:18 agis_schedconf.cvmfs.json
[2025-11-22 11:01:43] drwx------ 5 boincer umatlas      4096 Nov 21 22:18 pilot3
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas       533 Nov 22 10:50 boinc_task_state.xml
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas 911274153 Nov 22 11:00 HITS.47533967._003190.pool.root.1
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas      1062 Nov 22 11:00 memory_monitor_summary.json
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas        95 Nov 22 11:00 pilot_heartbeat.json
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas   1526164 Nov 22 11:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas   1984960 Nov 22 11:00 log.47533967._003190.job.log.tgz.1
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 11:00 init_data.xml
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas      8673 Nov 22 11:00 heartbeat.json
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 11:01 boinc_mmap_file
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas        29 Nov 22 11:01 wrapper_checkpoint.txt
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas      4746 Nov 22 11:01 pilotlog.txt
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas   6305838 Nov 22 11:01 log.47533967._003190.job.log.1
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas       353 Nov 22 11:01 output.list
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas       620 Nov 22 11:01 runtime_log
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas   8314880 Nov 22 11:01 result.tar.gz
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 11:01 runtime_log.err
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas       668 Nov 22 11:01 CxaMDmaTcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAVHKDmxqFlQn.diag
[2025-11-22 11:01:43] -rw-r--r-- 1 boincer umatlas     21331 Nov 22 11:01 stderr.txt
[2025-11-22 11:01:43] HITS file was successfully produced:
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas 911274153 Nov 22 11:00 shared/HITS.pool.root.1
[2025-11-22 11:01:43]  *** Contents of shared directory: ***
[2025-11-22 11:01:43] total 1297812
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas 408745298 Nov 21 22:18 ATLAS.root_0
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 22:18 start_atlas.sh
[2025-11-22 11:01:43] -rw-r--r-- 2 boincer umatlas    590105 Nov 21 22:18 input.tar.gz
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas 911274153 Nov 22 11:00 HITS.pool.root.1
[2025-11-22 11:01:43] -rw------- 1 boincer umatlas   8314880 Nov 22 11:01 result.tar.gz
11:01:44 (12091): run_atlas exited; CPU time 350144.419580
11:01:44 (12091): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN