Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:38 (25508): wrapper (7.7.26015): starting
01:51:38 (25508): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:51:38] Arguments: --nthreads 8
[2025-11-25 01:51:38] Threads: 8
[2025-11-25 01:51:38] Checking for CVMFS
[2025-11-25 01:51:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:51:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:51:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:51:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:51:41] 2.11.2.0 18458 283071 144724 153264 2 85 21846149 25165825 4632 130560 12 125930366 99.878 77355824 2910 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 01:51:41] CVMFS is ok
[2025-11-25 01:51:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:51:41] Checking for apptainer binary...
[2025-11-25 01:51:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:51:41] Running /usr/bin/apptainer --version
[2025-11-25 01:51:41] apptainer version 1.3.2-1.el7
[2025-11-25 01:51:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:51:51] cg-vwn434.simple-grid.lan
[2025-11-25 01:51:51] apptainer works
[2025-11-25 01:51:51] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:51:51] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:51:51] Starting ATLAS job with PandaID=6894281564
[2025-11-25 01:51:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:43:35]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:43:35] 2025-11-26 01:42:29,052 | INFO     | time since job start (89199s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:30,003 | INFO     | monitor loop #5989: job 0:6894281564 is in state 'finished'
[2025-11-26 02:43:35] 2025-11-26 01:42:30,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:43:35] 2025-11-26 01:42:31,060 | INFO     | time since job start (89201s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:32,507 | INFO     | monitor loop #5990: job 0:6894281564 is in state 'finished'
[2025-11-26 02:43:35] 2025-11-26 01:42:32,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:43:35] 2025-11-26 01:42:33,069 | INFO     | time since job start (89203s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:35,020 | INFO     | monitor loop #5991: job 0:6894281564 is in state 'finished'
[2025-11-26 02:43:35] 2025-11-26 01:42:35,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:43:35] 2025-11-26 01:42:35,076 | INFO     | time since job start (89205s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:36,297 | INFO     | PID=29350 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:43:35] 2025-11-26 01:42:36,297 | INFO     | .. there are 9 such processes running
[2025-11-26 02:43:35] 2025-11-26 01:42:37,300 | INFO     | time since job start (89207s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:37,525 | INFO     | monitor loop #5992: job 0:6894281564 is in state 'finished'
[2025-11-26 02:43:35] 2025-11-26 01:42:37,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:43:35] 2025-11-26 01:42:38,825 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:43:35] 2025-11-26 01:42:38,826 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 02:43:35] 2025-11-26 01:42:38,828 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894281564/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:43:35] 2025-11-26 01:42:38,829 | INFO     | extracted standard info from prmon json
[2025-11-26 02:43:35] 2025-11-26 01:42:38,829 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:43:35] 2025-11-26 01:42:38,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:43:35] 2025-11-26 01:42:38,856 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:43:35] 2025-11-26 01:42:38,858 | INFO     | sum of square deviations: 951208630085.0111
[2025-11-26 02:43:35] 2025-11-26 01:42:38,925 | INFO     | sum of deviations: 3775125774919.7705
[2025-11-26 02:43:35] 2025-11-26 01:42:38,925 | INFO     | mean x: 1764076955.3103924
[2025-11-26 02:43:35] 2025-11-26 01:42:38,926 | INFO     | mean y: 2837415.3530626292
[2025-11-26 02:43:35] 2025-11-26 01:42:38,926 | INFO     | intersect: -6998373646.345435
[2025-11-26 02:43:35] 2025-11-26 01:42:38,927 | INFO     | chi2: 24.43782870940363
[2025-11-26 02:43:35] 2025-11-26 01:42:38,929 | INFO     | sum of square deviations: 941423204056.3975
[2025-11-26 02:43:35] 2025-11-26 01:42:38,991 | INFO     | sum of deviations: 4246542651843.935
[2025-11-26 02:43:35] 2025-11-26 01:42:38,992 | INFO     | mean x: 1764076802.814917
[2025-11-26 02:43:35] 2025-11-26 01:42:38,992 | INFO     | mean y: 2844760.828038674
[2025-11-26 02:43:35] 2025-11-26 01:42:38,992 | INFO     | intersect: -7954498283.197097
[2025-11-26 02:43:35] 2025-11-26 01:42:38,993 | INFO     | chi2: 21.34701124931959
[2025-11-26 02:43:35] 2025-11-26 01:42:38,994 | INFO     | current chi2=21.34701124931959 (change=12.6476762597763 %)
[2025-11-26 02:43:35] 2025-11-26 01:42:38,994 | INFO     | right removable region: 1447
[2025-11-26 02:43:35] 2025-11-26 01:42:38,996 | INFO     | sum of square deviations: 941422042616.3966
[2025-11-26 02:43:35] 2025-11-26 01:42:39,073 | INFO     | sum of deviations: 3163382654018.504
[2025-11-26 02:43:35] 2025-11-26 01:42:39,074 | INFO     | mean x: 1764077107.814917
[2025-11-26 02:43:35] 2025-11-26 01:42:39,074 | INFO     | mean y: 2846947.643646409
[2025-11-26 02:43:35] 2025-11-26 01:42:39,074 | INFO     | intersect: -5924835505.704982
[2025-11-26 02:43:35] 2025-11-26 01:42:39,076 | INFO     | chi2: 19.638750500384933
[2025-11-26 02:43:35] 2025-11-26 01:42:39,076 | INFO     | current chi2=19.638750500384933 (change=19.637907549339765 %)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,076 | INFO     | left removable region: 10
[2025-11-26 02:43:35] 2025-11-26 01:42:39,078 | INFO     | sum of square deviations: 920129688817.2335
[2025-11-26 02:43:35] 2025-11-26 01:42:39,155 | INFO     | sum of deviations: 3221180863598.4985
[2025-11-26 02:43:35] 2025-11-26 01:42:39,155 | INFO     | mean x: 1764077077.3249826
[2025-11-26 02:43:35] 2025-11-26 01:42:39,155 | INFO     | mean y: 2864255.097425191
[2025-11-26 02:43:35] 2025-11-26 01:42:39,156 | INFO     | intersect: -6172799232.835857
[2025-11-26 02:43:35] 2025-11-26 01:42:39,157 | INFO     | chi2: 12.366157190803733
[2025-11-26 02:43:35] 2025-11-26 01:42:39,158 | INFO     | current memory leak: 3.50 B/s (using 1437 data points, chi2=12.37)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,159 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | ..............................
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . Timing measurements:
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . get job = 0 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . initial setup = 13 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . payload setup = 157 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . stage-in = 0 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . payload execution = 88747 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . stage-out = 5 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | . log creation = 2 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,160 | INFO     | ..............................
[2025-11-26 02:43:35] 2025-11-26 01:42:39,277 | INFO     | 
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | job summary report
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | --------------------------------------------------
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | PanDA job id: 6894281564
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | task id: 47533967
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | errors: (none)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | pilot state: finished 
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | transexitcode: 0
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | exeerrorcode: 0
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | exeerrordiag: 
[2025-11-26 02:43:35] 2025-11-26 01:42:39,278 | INFO     | exitcode: 0
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | exitmsg: OK
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | cpuconsumptiontime: 333550 s
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | nevents: 1000
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | neventsw: 0
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | pid: 3499
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | pgrp: 3499
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | corecount: 8
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | event service: False
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | sizes: {0: 2284083, 1: 2284167, 2: 2284366, 13: 2284366, 24: 2284422, 35: 2284450, 45: 2284606, 56: 2284634, 67: 2284662, 78: 2284690, 88: 2284746, 99: 2285054, 10
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | --------------------------------------------------
[2025-11-26 02:43:35] 2025-11-26 01:42:39,279 | INFO     | 
[2025-11-26 02:43:35] 2025-11-26 01:42:39,280 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-26 02:43:35] 2025-11-26 01:42:39,308 | INFO     | time since job start (89209s) is within the limit (172800.0s)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:43:35] 2025-11-26 01:42:39,734 | INFO     | job 6894281564 has completed (purged errors)
[2025-11-26 02:43:35] 2025-11-26 01:42:39,734 | INFO     | overall cleanup function is called
[2025-11-26 02:43:35] 2025-11-26 01:42:40,756 | INFO     | --- collectZombieJob: --- 10, [3499]
[2025-11-26 02:43:35] 2025-11-26 01:42:40,756 | INFO     | zombie collector waiting for pid 3499
[2025-11-26 02:43:35] 2025-11-26 01:42:40,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:43:35] 2025-11-26 01:42:40,757 | INFO     | collected zombie processes
[2025-11-26 02:43:35] 2025-11-26 01:42:40,757 | INFO     | will attempt to kill all subprocesses of pid=3499
[2025-11-26 02:43:35] 2025-11-26 01:42:40,880 | INFO     | process IDs to be killed: [3499] (in reverse order)
[2025-11-26 02:43:35] 2025-11-26 01:42:40,935 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:43:35] 2025-11-26 01:42:40,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:43:35] 2025-11-26 01:42:40,939 | INFO     | did not find any defunct processes belonging to 3499
[2025-11-26 02:43:35] 2025-11-26 01:42:40,942 | INFO     | did not find any defunct processes belonging to 3499
[2025-11-26 02:43:35] 2025-11-26 01:42:40,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:43:35] 2025-11-26 01:42:40,945 | INFO     | ready for new job
[2025-11-26 02:43:35] 2025-11-26 01:42:40,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:43:35] 2025-11-26 01:42:40,951 | INFO     | ***************************************
[2025-11-26 02:43:35] 2025-11-26 01:42:40,952 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:43:35] 2025-11-26 01:42:40,952 | INFO     | ***************************************
[2025-11-26 02:43:35] 2025-11-26 01:42:40,952 | INFO     | 
[2025-11-26 02:43:35] 2025-11-26 01:42:40,952 | INFO     | pilot is running in a VM
[2025-11-26 02:43:35] 2025-11-26 01:42:40,953 | INFO     | architecture information:
[2025-11-26 02:43:35] 2025-11-26 01:42:40,953 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:43:35] 2025-11-26 01:42:40,973 | INFO     | cat /etc/os-release:
[2025-11-26 02:43:35] NAME="CentOS Linux"
[2025-11-26 02:43:35] VERSION="7 (Core)"
[2025-11-26 02:43:35] ID="centos"
[2025-11-26 02:43:35] ID_LIKE="rhel fedora"
[2025-11-26 02:43:35] VERSION_ID="7"
[2025-11-26 02:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:43:35] ANSI_COLOR="0;31"
[2025-11-26 02:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:43:35] HOME_URL="https://www.centos.org/"
[2025-11-26 02:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:43:35] 
[2025-11-26 02:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:43:35] 
[2025-11-26 02:43:35] 2025-11-26 01:42:40,974 | INFO     | ***************************************
[2025-11-26 02:43:35] 2025-11-26 01:42:41,477 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-26 02:43:35] 2025-11-26 01:42:41,731 | INFO     | sufficient remaining disk space (495558066176 B)
[2025-11-26 02:43:35] 2025-11-26 01:42:41,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:43:35] 2025-11-26 01:42:41,731 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:43:35] 2025-11-26 01:42:41,731 | INFO     | update_server=False
[2025-11-26 02:43:35] 2025-11-26 01:42:41,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:43:35] 2025-11-26 01:42:41,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:43:35] 2025-11-26 01:42:41,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:43:35] 2025-11-26 01:42:41,736 | INFO     | aborting loop
[2025-11-26 02:43:35] 2025-11-26 01:42:41,890 | INFO     | all payload control threads have been joined
[2025-11-26 02:43:35] 2025-11-26 01:42:42,259 | INFO     | all data control threads have been joined
[2025-11-26 02:43:35] 2025-11-26 01:42:42,737 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:42,741 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:42,749 | INFO     | [job] validate thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:42,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:43:35] 2025-11-26 01:42:42,899 | INFO     | [payload] control thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,211 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,265 | INFO     | [data] control thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,305 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,371 | INFO     | all job control threads have been joined
[2025-11-26 02:43:35] 2025-11-26 01:42:43,664 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:43,956 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:44,087 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:44,237 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:44,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:43:35] 2025-11-26 01:42:44,377 | INFO     | [job] control thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:44,901 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:45,298 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:42:45,741 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:43:35] 2025-11-26 01:43:12,475 | INFO     | PID=29350 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:43:35] 2025-11-26 01:43:12,476 | INFO     | .. there are 9 such processes running
[2025-11-26 02:43:35] 2025-11-26 01:43:12,476 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:43:35] 2025-11-26 01:43:12,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:43:35] 2025-11-26 01:43:12,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:43:35] 2025-11-26 01:43:24,440 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:43:35] 2025-11-26 01:43:26,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539659585344)>', '<ExcThread(monitor, started 140539206805248)>']
[2025-11-26 02:43:35] 2025-11-26 01:43:26,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:43:35] 2025-11-26 01:43:26,561 | INFO     | [monitor] control thread has ended
[2025-11-26 02:43:35] 2025-11-26 01:43:31,154 | INFO     | all workflow threads have been joined
[2025-11-26 02:43:35] 2025-11-26 01:43:31,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:43:35] 2025-11-26 01:43:31,155 | INFO     | traces error code: 0
[2025-11-26 02:43:35] 2025-11-26 01:43:31,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:43:35] 2025-11-26 01:43:31,347 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:43:35] 2025-11-26 01:43:31,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:43:35] 2025-11-26 01:43:31,489 [wrapper] pilotpid: 29350
[2025-11-26 02:43:35] 2025-11-26 01:43:31,556 [wrapper] Pilot exit status: 0
[2025-11-26 02:43:35] 2025-11-26 01:43:31,966 [wrapper] pandaids: 6894281564
[2025-11-26 02:43:35] 2025-11-26 01:43:32,272 [wrapper] cleanup supervisor_pilot  2011 29351
[2025-11-26 02:43:35] 2025-11-26 01:43:32,286 [wrapper] Test setup, not cleaning
[2025-11-26 02:43:35] 2025-11-26 01:43:32,301 [wrapper] apfmon messages muted
[2025-11-26 02:43:35] 2025-11-26 01:43:32,356 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:43:35] 2025-11-26 01:43:32,440 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:43:35]  *** Error codes and diagnostics ***
[2025-11-26 02:43:35]     "exeErrorCode": 0,
[2025-11-26 02:43:35]     "exeErrorDiag": "",
[2025-11-26 02:43:35]     "pilotErrorCode": 0,
[2025-11-26 02:43:35]     "pilotErrorDiag": "",
[2025-11-26 02:43:35]  *** Listing of results directory ***
[2025-11-26 02:43:35] total 1328844
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc    576529 Nov 21 10:12 pilot3.tar.gz
[2025-11-26 02:43:35] -rwx------. 1 boinc boinc     36292 Nov 21 10:14 runpilot2-wrapper.sh
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc      5112 Nov 21 10:14 queuedata.json
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc       100 Nov 25 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:43:35] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 01:51 run_atlas
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc       105 Nov 25 01:51 job.xml
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc      6392 Nov 25 01:51 init_data.xml
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc 409146247 Nov 25 01:51 EVNT.47493127._002343.pool.root.1
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:51 start_atlas.sh
[2025-11-26 02:43:35] drwxrwx--x. 2 boinc boinc        68 Nov 25 01:51 shared
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc    590104 Nov 25 01:51 input.tar.gz
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc         0 Nov 25 01:51 boinc_lockfile
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc      2786 Nov 25 01:51 pandaJob.out
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc    991801 Nov 25 01:55 agis_schedconf.cvmfs.json
[2025-11-26 02:43:35] drwx------. 5 boinc boinc      4096 Nov 25 01:55 pilot3
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:21 boinc_task_state.xml
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc 918805200 Nov 26 02:39 HITS.47533967._003148.pool.root.1
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc      1031 Nov 26 02:40 memory_monitor_summary.json
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc   1516240 Nov 26 02:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc   2543501 Nov 26 02:41 log.47533967._003148.job.log.tgz.1
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc      8645 Nov 26 02:42 heartbeat.json
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:43 wrapper_checkpoint.txt
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:43 boinc_mmap_file
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc        95 Nov 26 02:43 pilot_heartbeat.json
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc      4884 Nov 26 02:43 pilotlog.txt
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc  11896892 Nov 26 02:43 log.47533967._003148.job.log.1
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc       353 Nov 26 02:43 output.list
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:43 runtime_log
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc  14458880 Nov 26 02:43 result.tar.gz
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc       662 Nov 26 02:43 Xt7KDmGPcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVUHKDm4PxqTn.diag
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc      8817 Nov 26 02:43 runtime_log.err
[2025-11-26 02:43:35] -rw-r--r--. 1 boinc boinc     21493 Nov 26 02:43 stderr.txt
[2025-11-26 02:43:35] HITS file was successfully produced:
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc 918805200 Nov 26 02:39 shared/HITS.pool.root.1
[2025-11-26 02:43:35]  *** Contents of shared directory: ***
[2025-11-26 02:43:35] total 1311548
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc 409146247 Nov 25 01:51 ATLAS.root_0
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:51 start_atlas.sh
[2025-11-26 02:43:35] -rw-r--r--. 2 boinc boinc    590104 Nov 25 01:51 input.tar.gz
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc 918805200 Nov 26 02:39 HITS.pool.root.1
[2025-11-26 02:43:35] -rw-------. 1 boinc boinc  14458880 Nov 26 02:43 result.tar.gz
02:43:37 (25508): run_atlas exited; CPU time 334025.443591
02:43:37 (25508): called boinc_finish(0)

</stderr_txt>
]]>

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