Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:20 (30879): wrapper (7.7.26015): starting
22:12:20 (30879): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:12:20] Arguments: --nthreads 8
[2025-11-24 22:12:20] Threads: 8
[2025-11-24 22:12:20] Checking for CVMFS
[2025-11-24 22:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:12:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:12:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:12:22] 2.11.2.0 24942 81164 87720 153258 3 85 20224692 25165824 1027 130560 14 22848888 99.878 15194127 1773 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 22:12:22] CVMFS is ok
[2025-11-24 22:12:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:12:22] Checking for apptainer binary...
[2025-11-24 22:12:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:12:22] Running /usr/bin/apptainer --version
[2025-11-24 22:12:22] apptainer version 1.3.2-1.el7
[2025-11-24 22:12:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:12:39] cg-vwn352.simple-grid.lan
[2025-11-24 22:12:39] apptainer works
[2025-11-24 22:12:39] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:12:39] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:12:39] Starting ATLAS job with PandaID=6893876654
[2025-11-24 22:12:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:07:58]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:07:58] 2025-11-25 22:07:10,723 | INFO     | time since job start (89403s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:11,187 | INFO     | monitor loop #6015: job 0:6893876654 is in state 'finished'
[2025-11-25 23:07:58] 2025-11-25 22:07:11,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:07:58] 2025-11-25 22:07:12,733 | INFO     | time since job start (89405s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:13,696 | INFO     | monitor loop #6016: job 0:6893876654 is in state 'finished'
[2025-11-25 23:07:58] 2025-11-25 22:07:13,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:07:58] 2025-11-25 22:07:14,740 | INFO     | time since job start (89407s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:16,208 | INFO     | monitor loop #6017: job 0:6893876654 is in state 'finished'
[2025-11-25 23:07:58] 2025-11-25 22:07:16,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:07:58] 2025-11-25 22:07:16,746 | INFO     | time since job start (89409s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:18,713 | INFO     | monitor loop #6018: job 0:6893876654 is in state 'finished'
[2025-11-25 23:07:58] 2025-11-25 22:07:18,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:07:58] 2025-11-25 22:07:18,755 | INFO     | time since job start (89411s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:20,761 | INFO     | time since job start (89413s) is within the limit (172800.0s)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,218 | INFO     | monitor loop #6019: job 0:6893876654 is in state 'finished'
[2025-11-25 23:07:58] 2025-11-25 22:07:21,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,233 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:07:58] 2025-11-25 22:07:21,234 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 23:07:58] 2025-11-25 22:07:21,236 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6893876654/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,237 | INFO     | extracted standard info from prmon json
[2025-11-25 23:07:58] 2025-11-25 22:07:21,237 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:07:58] 2025-11-25 22:07:21,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:07:58] 2025-11-25 22:07:21,273 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:07:58] 2025-11-25 22:07:21,283 | INFO     | sum of square deviations: 955146877282.9745
[2025-11-25 23:07:58] 2025-11-25 22:07:21,383 | INFO     | sum of deviations: 4250232332782.7476
[2025-11-25 23:07:58] 2025-11-25 22:07:21,384 | INFO     | mean x: 1764063951.204811
[2025-11-25 23:07:58] 2025-11-25 22:07:21,384 | INFO     | mean y: 2821432.034364261
[2025-11-25 23:07:58] 2025-11-25 22:07:21,384 | INFO     | intersect: -7846946829.612678
[2025-11-25 23:07:58] 2025-11-25 22:07:21,386 | INFO     | chi2: 31.330301614242213
[2025-11-25 23:07:58] 2025-11-25 22:07:21,388 | INFO     | sum of square deviations: 945334400043.1832
[2025-11-25 23:07:58] 2025-11-25 22:07:21,460 | INFO     | sum of deviations: 4715190629118.554
[2025-11-25 23:07:58] 2025-11-25 22:07:21,461 | INFO     | mean x: 1764063798.7089655
[2025-11-25 23:07:58] 2025-11-25 22:07:21,461 | INFO     | mean y: 2828656.7572413795
[2025-11-25 23:07:58] 2025-11-25 22:07:21,461 | INFO     | intersect: -8796065250.477942
[2025-11-25 23:07:58] 2025-11-25 22:07:21,463 | INFO     | chi2: 28.276429165300744
[2025-11-25 23:07:58] 2025-11-25 22:07:21,463 | INFO     | current chi2=28.276429165300744 (change=9.747344556533829 %)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,463 | INFO     | right removable region: 1449
[2025-11-25 23:07:58] 2025-11-25 22:07:21,466 | INFO     | sum of square deviations: 945333330713.1829
[2025-11-25 23:07:58] 2025-11-25 22:07:21,557 | INFO     | sum of deviations: 3626107887516.8584
[2025-11-25 23:07:58] 2025-11-25 22:07:21,557 | INFO     | mean x: 1764064103.7089655
[2025-11-25 23:07:58] 2025-11-25 22:07:21,557 | INFO     | mean y: 2831131.01862069
[2025-11-25 23:07:58] 2025-11-25 22:07:21,558 | INFO     | intersect: -6763762781.118825
[2025-11-25 23:07:58] 2025-11-25 22:07:21,559 | INFO     | chi2: 26.1975117846136
[2025-11-25 23:07:58] 2025-11-25 22:07:21,560 | INFO     | current chi2=26.1975117846136 (change=16.382829290399606 %)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,560 | INFO     | left removable region: 10
[2025-11-25 23:07:58] 2025-11-25 22:07:21,562 | INFO     | sum of square deviations: 923981883807.4825
[2025-11-25 23:07:58] 2025-11-25 22:07:21,641 | INFO     | sum of deviations: 3619539921784.922
[2025-11-25 23:07:58] 2025-11-25 22:07:21,641 | INFO     | mean x: 1764064073.2182071
[2025-11-25 23:07:58] 2025-11-25 22:07:21,641 | INFO     | mean y: 2849194.7741487143
[2025-11-25 23:07:58] 2025-11-25 22:07:21,641 | INFO     | intersect: -6907568043.373992
[2025-11-25 23:07:58] 2025-11-25 22:07:21,643 | INFO     | chi2: 18.035705611824785
[2025-11-25 23:07:58] 2025-11-25 22:07:21,643 | INFO     | current memory leak: 3.92 B/s (using 1439 data points, chi2=18.04)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | ..............................
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | . Timing measurements:
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | . get job = 0 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | . initial setup = 4 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,646 | INFO     | . payload setup = 193 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,647 | INFO     | . stage-in = 0 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,647 | INFO     | . payload execution = 88893 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,647 | INFO     | . stage-out = 5 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,647 | INFO     | . log creation = 1 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,647 | INFO     | ..............................
[2025-11-25 23:07:58] 2025-11-25 22:07:21,783 | INFO     | 
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | job summary report
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | --------------------------------------------------
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | PanDA job id: 6893876654
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | task id: 47523449
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | errors: (none)
[2025-11-25 23:07:58] 2025-11-25 22:07:21,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | pilot state: finished 
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | transexitcode: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | exeerrorcode: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | exeerrordiag: 
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | exitcode: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | exitmsg: OK
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | cpuconsumptiontime: 339943 s
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | nevents: 1000
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | neventsw: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | pid: 8717
[2025-11-25 23:07:58] 2025-11-25 22:07:21,785 | INFO     | pgrp: 8717
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | corecount: 8
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | event service: False
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | sizes: {0: 2283431, 1: 2284116, 2: 2284315, 13: 2284315, 23: 2284371, 34: 2284399, 45: 2284555, 56: 2284583, 66: 2284611, 77: 2284639, 88: 2284695, 99: 2285003, 10
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | --------------------------------------------------
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | 
[2025-11-25 23:07:58] 2025-11-25 22:07:21,786 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-25 23:07:58] 2025-11-25 22:07:22,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:07:58] 2025-11-25 22:07:22,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:07:58] 2025-11-25 22:07:22,287 | INFO     | job 6893876654 has completed (purged errors)
[2025-11-25 23:07:58] 2025-11-25 22:07:22,287 | INFO     | overall cleanup function is called
[2025-11-25 23:07:58] 2025-11-25 22:07:23,312 | INFO     | --- collectZombieJob: --- 10, [8717]
[2025-11-25 23:07:58] 2025-11-25 22:07:23,312 | INFO     | zombie collector waiting for pid 8717
[2025-11-25 23:07:58] 2025-11-25 22:07:23,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:07:58] 2025-11-25 22:07:23,312 | INFO     | collected zombie processes
[2025-11-25 23:07:58] 2025-11-25 22:07:23,312 | INFO     | will attempt to kill all subprocesses of pid=8717
[2025-11-25 23:07:58] 2025-11-25 22:07:23,422 | INFO     | process IDs to be killed: [8717] (in reverse order)
[2025-11-25 23:07:58] 2025-11-25 22:07:24,267 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:07:58] 2025-11-25 22:07:24,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:07:58] 2025-11-25 22:07:24,272 | INFO     | did not find any defunct processes belonging to 8717
[2025-11-25 23:07:58] 2025-11-25 22:07:24,276 | INFO     | did not find any defunct processes belonging to 8717
[2025-11-25 23:07:58] 2025-11-25 22:07:24,333 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:07:58] 2025-11-25 22:07:24,333 | INFO     | ready for new job
[2025-11-25 23:07:58] 2025-11-25 22:07:24,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:07:58] 2025-11-25 22:07:24,340 | INFO     | ***************************************
[2025-11-25 23:07:58] 2025-11-25 22:07:24,341 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:07:58] 2025-11-25 22:07:24,341 | INFO     | ***************************************
[2025-11-25 23:07:58] 2025-11-25 22:07:24,341 | INFO     | 
[2025-11-25 23:07:58] 2025-11-25 22:07:24,341 | INFO     | pilot is running in a VM
[2025-11-25 23:07:58] 2025-11-25 22:07:24,342 | INFO     | architecture information:
[2025-11-25 23:07:58] 2025-11-25 22:07:24,357 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:07:58] 2025-11-25 22:07:24,650 | INFO     | cat /etc/os-release:
[2025-11-25 23:07:58] NAME="CentOS Linux"
[2025-11-25 23:07:58] VERSION="7 (Core)"
[2025-11-25 23:07:58] ID="centos"
[2025-11-25 23:07:58] ID_LIKE="rhel fedora"
[2025-11-25 23:07:58] VERSION_ID="7"
[2025-11-25 23:07:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:07:58] ANSI_COLOR="0;31"
[2025-11-25 23:07:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:07:58] HOME_URL="https://www.centos.org/"
[2025-11-25 23:07:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:07:58] 
[2025-11-25 23:07:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:07:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:07:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:07:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:07:58] 
[2025-11-25 23:07:58] 2025-11-25 22:07:24,651 | INFO     | ***************************************
[2025-11-25 23:07:58] 2025-11-25 22:07:25,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-25 23:07:58] 2025-11-25 22:07:25,483 | INFO     | sufficient remaining disk space (494665728000 B)
[2025-11-25 23:07:58] 2025-11-25 22:07:25,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:07:58] 2025-11-25 22:07:25,484 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:07:58] 2025-11-25 22:07:25,484 | INFO     | update_server=False
[2025-11-25 23:07:58] 2025-11-25 22:07:25,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:07:58] 2025-11-25 22:07:25,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:07:58] 2025-11-25 22:07:25,485 | INFO     | aborting loop
[2025-11-25 23:07:58] 2025-11-25 22:07:25,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:07:58] 2025-11-25 22:07:25,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:07:58] 2025-11-25 22:07:25,790 | INFO     | all data control threads have been joined
[2025-11-25 23:07:58] 2025-11-25 22:07:25,821 | INFO     | all payload control threads have been joined
[2025-11-25 23:07:58] 2025-11-25 22:07:26,491 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,492 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,672 | INFO     | all job control threads have been joined
[2025-11-25 23:07:58] 2025-11-25 22:07:26,708 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,730 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,796 | INFO     | [data] control thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:07:58] 2025-11-25 22:07:26,826 | INFO     | [job] validate thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,827 | INFO     | [payload] control thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,956 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:26,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,433 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,493 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,678 | INFO     | [job] control thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,806 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,815 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:27,867 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:29,496 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:07:58] 2025-11-25 22:07:42,391 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:07:58] 2025-11-25 22:07:44,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356728444736)>', '<ExcThread(monitor, started 140356268041984)>']
[2025-11-25 23:07:58] 2025-11-25 22:07:49,464 | INFO     | all workflow threads have been joined
[2025-11-25 23:07:58] 2025-11-25 22:07:49,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:07:58] 2025-11-25 22:07:49,465 | INFO     | traces error code: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:49,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:07:58] 2025-11-25 22:07:54,016 | INFO     | PID=2235 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 23:07:58] 2025-11-25 22:07:54,017 | INFO     | .. there are 9 such processes running
[2025-11-25 23:07:58] 2025-11-25 22:07:54,019 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:07:58] 2025-11-25 22:07:54,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:07:58] 2025-11-25 22:07:54,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:07:58] 2025-11-25 22:07:54,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:07:58] 2025-11-25 22:07:54,019 | INFO     | [monitor] control thread has ended
[2025-11-25 23:07:58] 2025-11-25 22:07:54,349 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:07:58] 2025-11-25 22:07:54,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:07:58] 2025-11-25 22:07:54,463 [wrapper] pilotpid: 2235
[2025-11-25 23:07:58] 2025-11-25 22:07:54,523 [wrapper] Pilot exit status: 0
[2025-11-25 23:07:58] 2025-11-25 22:07:54,888 [wrapper] pandaids: 6893876654
[2025-11-25 23:07:58] 2025-11-25 22:07:55,932 [wrapper] cleanup supervisor_pilot  6236 2236
[2025-11-25 23:07:58] 2025-11-25 22:07:56,042 [wrapper] Test setup, not cleaning
[2025-11-25 23:07:58] 2025-11-25 22:07:56,154 [wrapper] apfmon messages muted
[2025-11-25 23:07:58] 2025-11-25 22:07:56,247 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:07:58] 2025-11-25 22:07:56,320 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:07:58]  *** Error codes and diagnostics ***
[2025-11-25 23:07:58]     "exeErrorCode": 0,
[2025-11-25 23:07:58]     "exeErrorDiag": "",
[2025-11-25 23:07:58]     "pilotErrorCode": 0,
[2025-11-25 23:07:58]     "pilotErrorDiag": "",
[2025-11-25 23:07:58]  *** Listing of results directory ***
[2025-11-25 23:07:58] total 1323996
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc    576529 Nov 20 18:21 pilot3.tar.gz
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc      5112 Nov 20 18:33 queuedata.json
[2025-11-25 23:07:58] -rwx------. 1 boinc boinc     36292 Nov 20 18:33 runpilot2-wrapper.sh
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:07:58] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:12 run_atlas
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:12 job.xml
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc      6392 Nov 24 22:12 init_data.xml
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc 410643891 Nov 24 22:12 EVNT.47493127._000766.pool.root.1
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:12 start_atlas.sh
[2025-11-25 23:07:58] drwxrwx--x. 2 boinc boinc        68 Nov 24 22:12 shared
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc    590101 Nov 24 22:12 input.tar.gz
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:12 boinc_lockfile
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc      2785 Nov 24 22:12 pandaJob.out
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc    991801 Nov 24 22:17 agis_schedconf.cvmfs.json
[2025-11-25 23:07:58] drwx------. 5 boinc boinc      4096 Nov 24 22:17 pilot3
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc       533 Nov 25 22:40 boinc_task_state.xml
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc 912319438 Nov 25 23:04 HITS.47523449._007658.pool.root.1
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc      1033 Nov 25 23:05 memory_monitor_summary.json
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc   1516240 Nov 25 23:05 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc   2539650 Nov 25 23:05 log.47523449._007658.job.log.tgz.1
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc      8628 Nov 25 23:07 heartbeat.json
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc      8192 Nov 25 23:07 boinc_mmap_file
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc        29 Nov 25 23:07 wrapper_checkpoint.txt
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc        95 Nov 25 23:07 pilot_heartbeat.json
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc       819 Nov 25 23:07 pilotlog.txt
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc  11912980 Nov 25 23:07 log.47523449._007658.job.log.1
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc       353 Nov 25 23:07 output.list
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc       620 Nov 25 23:07 runtime_log
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc  14469120 Nov 25 23:07 result.tar.gz
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc      8817 Nov 25 23:07 runtime_log.err
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc       662 Nov 25 23:07 Oe5NDmoiNg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9uGKDmQVzeJo.diag
[2025-11-25 23:07:58] -rw-r--r--. 1 boinc boinc     21426 Nov 25 23:07 stderr.txt
[2025-11-25 23:07:58] HITS file was successfully produced:
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc 912319438 Nov 25 23:04 shared/HITS.pool.root.1
[2025-11-25 23:07:58]  *** Contents of shared directory: ***
[2025-11-25 23:07:58] total 1306688
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc 410643891 Nov 24 22:12 ATLAS.root_0
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:12 start_atlas.sh
[2025-11-25 23:07:58] -rw-r--r--. 2 boinc boinc    590101 Nov 24 22:12 input.tar.gz
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc 912319438 Nov 25 23:04 HITS.pool.root.1
[2025-11-25 23:07:58] -rw-------. 1 boinc boinc  14469120 Nov 25 23:07 result.tar.gz
23:07:59 (30879): run_atlas exited; CPU time 340407.557687
23:07:59 (30879): called boinc_finish(0)

</stderr_txt>
]]>

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