Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 14:53:41 (21828): vboxwrapper version 26210
2025-11-23 14:53:41 (21828): BOINC client version: 7.16.11
2025-11-23 14:53:42 (21828): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-11-23 14:53:42 (21828): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 14:53:42 (21828): Create VM. (boinc_40a0b8f737257478, slot#2)
2025-11-23 14:53:43 (21828): Setting Memory Size for VM. (4400MB)
2025-11-23 14:53:43 (21828): Setting CPU Count for VM. (4)
2025-11-23 14:53:43 (21828): Setting Chipset Options for VM.
2025-11-23 14:53:43 (21828): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 14:53:44 (21828): Setting Boot Options for VM.
2025-11-23 14:53:44 (21828): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 14:53:44 (21828): Enabling VM Network Access.
2025-11-23 14:53:45 (21828): Disabling USB Support for VM.
2025-11-23 14:53:45 (21828): Disabling COM Port Support for VM.
2025-11-23 14:53:45 (21828): Disabling LPT Port Support for VM.
2025-11-23 14:53:46 (21828): Disabling Audio Support for VM.
2025-11-23 14:53:46 (21828): Disabling Clipboard Support for VM.
2025-11-23 14:53:46 (21828): Disabling Drag and Drop Support for VM.
2025-11-23 14:53:46 (21828): Adding storage controller(s) to VM.
2025-11-23 14:53:47 (21828): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 14:53:47 (21828): Adding VirtualBox Guest Additions to VM.
2025-11-23 14:53:47 (21828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 14:53:48 (21828): forwarding host port 54690 to guest port 80
2025-11-23 14:53:48 (21828): Enabling remote desktop for VM.
2025-11-23 14:53:48 (21828): Required extension pack not installed, remote desktop not enabled.
2025-11-23 14:53:48 (21828): Enabling shared directory for VM.
2025-11-23 14:53:49 (21828): Starting VM using VBoxManage interface. (boinc_40a0b8f737257478, slot#2)
2025-11-23 14:53:53 (21828): Successfully started VM. (PID = '10676')
2025-11-23 14:53:53 (21828): Reporting VM Process ID to BOINC.
2025-11-23 14:53:53 (21828): Guest Log: BIOS: VirtualBox 6.1.12
2025-11-23 14:53:53 (21828): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 14:53:53 (21828): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 14:53:53 (21828): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 14:53:53 (21828): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 14:53:53 (21828): Detected: Web Application Enabled (http://localhost:54690)
2025-11-23 14:53:53 (21828): Preference change detected
2025-11-23 14:53:53 (21828): Setting CPU throttle for VM. (100%)
2025-11-23 14:53:53 (21828): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 14:53:55 (21828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 14:53:55 (21828): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 14:53:58 (21828): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 14:53:58 (21828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 14:53:58 (21828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 14:54:07 (21828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 14:54:07 (21828): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-23 14:54:18 (21828): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000162 main     Log opened 2025-11-23T14:54:16.357441000Z
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000270 main     OS Product: Linux
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000303 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000328 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000354 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000355 main     Process ID: 1309
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.000356 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 14:54:18 (21828): Guest Log: 00:00:00.002352 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 14:54:18 (21828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 14:54:18 (21828): Guest Log: [INFO] Mounting shared directory
2025-11-23 14:54:18 (21828): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 14:54:28 (21828): Guest Log: 00:00:10.005142 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 412 322 000ns (GuestNow=1 763 934 867 773 857 000 ns GuestLast=1 763 909 656 361 535 000 ns fSetTimeLastLoop=true )
2025-11-23 14:55:12 (21828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 14:55:12 (21828): Guest Log: [INFO] Detected branch: prod
2025-11-23 14:55:13 (21828): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 14:55:13 (21828): Guest Log: Copying input files
2025-11-23 14:55:20 (21828): Guest Log: Copied input files into RunAtlas.
2025-11-23 14:55:20 (21828): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 14:55:20 (21828): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 14:55:20 (21828): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 14:55:20 (21828): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 14:55:32 (21828): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 14:55:33 (21828): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 14:55:33 (21828): Guest Log: 2.6.3.0 1611 0 32180 153221 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 14:55:34 (21828): Guest Log: copied the webapp to /var/www
2025-11-23 14:55:34 (21828): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-23 14:55:34 (21828): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-23 14:55:34 (21828): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 14:55:34 (21828): Guest Log:  *** Starting ATLAS job. (PandaID=6894279262 taskID=47533967) ***
2025-11-23 16:41:18 (21828): Status Report: Elapsed Time: '6000.657925'
2025-11-23 16:41:18 (21828): Status Report: CPU Time: '23074.250000'
2025-11-23 18:25:19 (21828): Status Report: Elapsed Time: '12001.030954'
2025-11-23 18:25:19 (21828): Status Report: CPU Time: '47691.156250'
2025-11-23 20:09:43 (21828): Status Report: Elapsed Time: '18001.758373'
2025-11-23 20:09:43 (21828): Status Report: CPU Time: '72446.343750'
2025-11-23 21:53:05 (21828): Status Report: Elapsed Time: '24001.948706'
2025-11-23 21:53:05 (21828): Status Report: CPU Time: '96891.312500'
2025-11-23 23:37:01 (21828): Status Report: Elapsed Time: '30002.756809'
2025-11-23 23:37:01 (21828): Status Report: CPU Time: '121441.234375'
2025-11-24 01:21:05 (21828): Status Report: Elapsed Time: '36003.610712'
2025-11-24 01:21:05 (21828): Status Report: CPU Time: '146104.828125'
2025-11-24 03:04:49 (21828): Status Report: Elapsed Time: '42004.385773'
2025-11-24 03:04:49 (21828): Status Report: CPU Time: '170665.359375'
2025-11-24 04:48:31 (21828): Status Report: Elapsed Time: '48004.394953'
2025-11-24 04:48:31 (21828): Status Report: CPU Time: '195244.109375'
2025-11-24 06:32:34 (21828): Status Report: Elapsed Time: '54005.390381'
2025-11-24 06:32:34 (21828): Status Report: CPU Time: '219860.812500'
2025-11-24 08:16:10 (21828): Status Report: Elapsed Time: '60005.929565'
2025-11-24 08:16:10 (21828): Status Report: CPU Time: '244313.703125'
2025-11-24 09:59:46 (21828): Status Report: Elapsed Time: '66005.971481'
2025-11-24 09:59:46 (21828): Status Report: CPU Time: '268847.375000'
2025-11-24 10:42:56 (21828): Guest Log:  *** Job finished ***
2025-11-24 10:42:56 (21828): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:39,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:40,898 [wrapper] supervise_pilot (15 min periods counter: 80)
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:49,623 | INFO     | [monitor] cgroup control has ended
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:49,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700160313152)>', '<ExcThread(monitor, started 139699565876992)>']
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:49,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:49,986 | INFO     | [monitor] control thread has ended
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:54,930 | INFO     | all workflow threads have been joined
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:54,930 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:54,931 | INFO     | traces error code: 0
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:54,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,038 [wrapper] ==== pilot stdout END ====
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,045 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,052 [wrapper] pilotpid: 6011
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,056 [wrapper] Pilot exit status: 0
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,073 [wrapper] pandaids: 6894279262
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,110 [wrapper] cleanup supervisor_pilot 10354 6012
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,120 [wrapper] Test setup, not cleaning
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,128 [wrapper] apfmon messages muted
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,133 [wrapper] ==== wrapper stdout END ====
2025-11-24 10:42:56 (21828): Guest Log: 2025-11-24 17:42:55,139 [wrapper] ==== wrapper stderr END ====
2025-11-24 10:42:56 (21828): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 10:42:56 (21828): Guest Log:     "exeErrorCode": 0,
2025-11-24 10:42:56 (21828): Guest Log:     "exeErrorDiag": "",
2025-11-24 10:42:56 (21828): Guest Log:     "pilotErrorCode": 0,
2025-11-24 10:42:56 (21828): Guest Log:     "pilotErrorDiag": "",
2025-11-24 10:42:56 (21828): Guest Log:  *** Listing of results directory ***
2025-11-24 10:42:56 (21828): Guest Log: total 920512
2025-11-24 10:42:56 (21828): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 08:27 pilot3.tar.gz
2025-11-24 10:42:56 (21828): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 08:52 queuedata.json
2025-11-24 10:42:56 (21828): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 08:52 runpilot2-wrapper.sh
2025-11-24 10:42:56 (21828): Guest Log: -rwxr-xr-x. 1 atlas atlas     12101 Nov 23 21:55 init_data.xml
2025-11-24 10:42:56 (21828): Guest Log: -rwxr-xr-x. 1 atlas atlas    590104 Nov 23 21:55 input.tar.gz
2025-11-24 10:42:56 (21828): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 21:55 start_atlas.sh
2025-11-24 10:42:56 (21828): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 21:55 EVNT.47493127._002331.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 10:42:56 (21828): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 23 21:55 pandaJob.out
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas    989786 Nov 23 21:56 agis_schedconf.cvmfs.json
2025-11-24 10:42:56 (21828): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 21:56 pilot3
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas 916494669 Nov 24 17:41 HITS.47533967._003029.pool.root.1
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 24 17:41 memory_monitor_summary.json
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas        95 Nov 24 17:41 pilot_heartbeat.json
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 24 17:41 agis_ddmendpoints.agis.ALL.json
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas   1819974 Nov 24 17:41 log.47533967._003029.job.log.tgz.1
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas      8662 Nov 24 17:42 heartbeat.json
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 24 17:42 pilotlog.txt
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas   9311457 Nov 24 17:42 log.47533967._003029.job.log.1
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas       353 Nov 24 17:42 output.list
2025-11-24 10:42:56 (21828): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 24 17:42 runtime_log
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas  11151360 Nov 24 17:42 result.tar.gz
2025-11-24 10:42:56 (21828): Guest Log: -rw-r--r--. 1 atlas atlas      8789 Nov 24 17:42 runtime_log.err
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas       677 Nov 24 17:42 5WsLDm13bg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrTHKDmxpVBLo.diag
2025-11-24 10:42:56 (21828): Guest Log: Looking for outputfile HITS.47533967._003029.pool.root.1
2025-11-24 10:42:56 (21828): Guest Log: HITS file was successfully produced
2025-11-24 10:42:56 (21828): Guest Log: -rw-------. 1 atlas atlas 916494669 Nov 24 17:41 /home/atlas/RunAtlas/HITS.47533967._003029.pool.root.1
2025-11-24 10:43:01 (21828): Guest Log: Successfully finished the ATLAS job!
2025-11-24 10:43:01 (21828): Guest Log: Copying the results back to the shared directory!
2025-11-24 10:43:01 (21828): Guest Log:  *** Contents of shared directory: ***
2025-11-24 10:43:01 (21828): Guest Log: total 1305256
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root 408306310 Nov 23 21:53 ATLAS.root_0
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root 916494669 Nov 24 17:43 HITS.pool.root.1
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root     12101 Nov 23 21:53 init_data.xml
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root    590104 Nov 22 02:56 input.tar.gz
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root  11151360 Nov 24 17:43 result.tar.gz
2025-11-24 10:43:01 (21828): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 22 02:56 start_atlas.sh
2025-11-24 10:43:01 (21828): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 10:43:02 (21828): VM Completion File Detected.
2025-11-24 10:43:02 (21828): Powering off VM.
2025-11-24 10:43:03 (21828): Successfully stopped VM.
2025-11-24 10:43:03 (21828): Deregistering VM. (boinc_40a0b8f737257478, slot#2)
2025-11-24 10:43:03 (21828): Removing network bandwidth throttle group from VM.
2025-11-24 10:43:03 (21828): Removing VM from VirtualBox.
2025-11-24 10:43:08 (21828): called boinc_finish(0)

</stderr_txt>
]]>

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