Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:43 (15576): wrapper (7.7.26015): starting
22:01:43 (15576): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 22:01:43] Arguments: --nthreads 4
[2025-11-21 22:01:43] Threads: 4
[2025-11-21 22:01:43] Checking for CVMFS
[2025-11-21 22:01:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:01:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:01:44] 2.11.2.0 2311 101117 72664 153155 2 81 18783007 20275201 1 130560 0 38568230 99.938 4466901 40353 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 22:01:44] CVMFS is ok
[2025-11-21 22:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:01:44] Further information can be found at the LHC@home message board.
[2025-11-21 22:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:01:44] Checking for apptainer binary...
[2025-11-21 22:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:01:44] Running /usr/bin/apptainer --version
[2025-11-21 22:01:44] apptainer version 1.3.2-1.el7
[2025-11-21 22:01:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:01:44] c-205-34.aglt2.org
[2025-11-21 22:01:44] apptainer works
[2025-11-21 22:01:44] Set ATHENA_PROC_NUMBER=4
[2025-11-21 22:01:44] Set ATHENA_CORE_NUMBER=4
[2025-11-21 22:01:44] Starting ATLAS job with PandaID=6894283565
[2025-11-21 22:01:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:01:51]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:01:51] 2025-11-22 12:00:55,639 | INFO     | time since job start (32343s) is within the limit (172800.0s)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,863 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 07:01:51] 2025-11-22 12:00:55,864 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3313.24725
[2025-11-22 07:01:51] 2025-11-22 12:00:55,865 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894283565/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,865 | INFO     | extracted standard info from prmon json
[2025-11-22 07:01:51] 2025-11-22 12:00:55,865 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:01:51] 2025-11-22 12:00:55,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:01:51] 2025-11-22 12:00:55,870 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:01:51] 2025-11-22 12:00:55,870 | INFO     | sum of square deviations: 46164112072.5
[2025-11-22 07:01:51] 2025-11-22 12:00:55,873 | INFO     | sum of deviations: 226119726603.9997
[2025-11-22 07:01:51] 2025-11-22 12:00:55,873 | INFO     | mean x: 1763796667.5
[2025-11-22 07:01:51] 2025-11-22 12:00:55,873 | INFO     | mean y: 2259358.6603773586
[2025-11-22 07:01:51] 2025-11-22 12:00:55,873 | INFO     | intersect: -8637118771.558846
[2025-11-22 07:01:51] 2025-11-22 12:00:55,874 | INFO     | chi2: 2.416949640741369
[2025-11-22 07:01:51] 2025-11-22 12:00:55,874 | INFO     | sum of square deviations: 44869864550.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,877 | INFO     | sum of deviations: 293546376480.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,877 | INFO     | mean x: 1763796515.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,877 | INFO     | mean y: 2267274.257142857
[2025-11-22 07:01:51] 2025-11-22 12:00:55,877 | INFO     | intersect: -11536793095.522867
[2025-11-22 07:01:51] 2025-11-22 12:00:55,877 | INFO     | chi2: 1.232722975012959
[2025-11-22 07:01:51] 2025-11-22 12:00:55,878 | INFO     | current chi2=1.232722975012959 (change=48.99674555756005 %)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,878 | INFO     | sum of square deviations: 43600036090.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | sum of deviations: 288444610858.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | mean x: 1763796362.5
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | mean y: 2266661.5038461536
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | intersect: -11666474950.633394
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | chi2: 1.2318276348288024
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | current chi2=1.2318276348288024 (change=0.0726310941148053 %)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,881 | INFO     | right removable region: 519
[2025-11-22 07:01:51] 2025-11-22 12:00:55,882 | INFO     | sum of square deviations: 44869864550.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | sum of deviations: 167441695691.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | mean x: 1763796820.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | mean y: 2266236.100952381
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | intersect: -6579726675.112182
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | chi2: 1.25914956263205
[2025-11-22 07:01:51] 2025-11-22 12:00:55,885 | INFO     | current chi2=1.25914956263205 (change=47.90335961464958 %)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,886 | INFO     | sum of square deviations: 43600036090.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | sum of deviations: 153468994058.49997
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | mean x: 1763796972.5
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | mean y: 2267915.8134615384
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | intersect: -6206170685.802447
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | chi2: 1.2441999134276298
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | current chi2=1.2441999134276298 (change=1.187281451551336 %)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,889 | INFO     | left removable region: 20
[2025-11-22 07:01:51] 2025-11-22 12:00:55,890 | INFO     | sum of square deviations: 38528164250.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,892 | INFO     | sum of deviations: 189113073946.99997
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | mean x: 1763796942.0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | mean y: 2278780.9599198396
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | intersect: -8655207710.105858
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | chi2: 0.036338074183194354
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | current memory leak: 4.91 B/s (using 499 data points, chi2=0.04)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | could have reported an average CPU frequency of 3248 MHz (21 samples)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | ..............................
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | . Timing measurements:
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | . get job = 0 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | . initial setup = 1 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,893 | INFO     | . payload setup = 3 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,894 | INFO     | . stage-in = 0 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,894 | INFO     | . payload execution = 32312 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,894 | INFO     | . stage-out = 2 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,894 | INFO     | . log creation = 0 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,894 | INFO     | ..............................
[2025-11-22 07:01:51] 2025-11-22 12:00:55,931 | INFO     | 
[2025-11-22 07:01:51] 2025-11-22 12:00:55,931 | INFO     | job summary report
[2025-11-22 07:01:51] 2025-11-22 12:00:55,931 | INFO     | --------------------------------------------------
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | PanDA job id: 6894283565
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | task id: 47533967
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | errors: (none)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | pilot state: finished 
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | transexitcode: 0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | exeerrorcode: 0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | exeerrordiag: 
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | exitcode: 0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | exitmsg: OK
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | cpuconsumptiontime: 127235 s
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | nevents: 1000
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | neventsw: 0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | pid: 25672
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | pgrp: 25672
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | corecount: 4
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | event service: False
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | sizes: {0: 2298801, 3: 2299063, 11: 2299091, 32319: 2339641, 32320: 2339640, 32323: 2348690, 32324: 2348874, 32330: 2349120}
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | --------------------------------------------------
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | 
[2025-11-22 07:01:51] 2025-11-22 12:00:55,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 07:01:51] 2025-11-22 12:00:55,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,945 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:01:51] 2025-11-22 12:00:55,945 | INFO     | job 6894283565 has completed (purged errors)
[2025-11-22 07:01:51] 2025-11-22 12:00:55,945 | INFO     | overall cleanup function is called
[2025-11-22 07:01:51] 2025-11-22 12:00:56,681 | INFO     | PID=19233 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 07:01:51] 2025-11-22 12:00:56,953 | INFO     | --- collectZombieJob: --- 10, [25672]
[2025-11-22 07:01:51] 2025-11-22 12:00:56,953 | INFO     | zombie collector waiting for pid 25672
[2025-11-22 07:01:51] 2025-11-22 12:00:56,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:01:51] 2025-11-22 12:00:56,954 | INFO     | collected zombie processes
[2025-11-22 07:01:51] 2025-11-22 12:00:56,954 | INFO     | will attempt to kill all subprocesses of pid=25672
[2025-11-22 07:01:51] 2025-11-22 12:00:56,985 | INFO     | process IDs to be killed: [25672] (in reverse order)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,007 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:01:51] 2025-11-22 12:00:57,008 | INFO     | did not find any defunct processes belonging to 25672
[2025-11-22 07:01:51] 2025-11-22 12:00:57,009 | INFO     | did not find any defunct processes belonging to 25672
[2025-11-22 07:01:51] 2025-11-22 12:00:57,010 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:01:51] 2025-11-22 12:00:57,010 | INFO     | ready for new job
[2025-11-22 07:01:51] 2025-11-22 12:00:57,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:01:51] 2025-11-22 12:00:57,011 | INFO     | ***************************************
[2025-11-22 07:01:51] 2025-11-22 12:00:57,011 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:01:51] 2025-11-22 12:00:57,011 | INFO     | ***************************************
[2025-11-22 07:01:51] 2025-11-22 12:00:57,011 | INFO     | 
[2025-11-22 07:01:51] 2025-11-22 12:00:57,012 | INFO     | architecture information:
[2025-11-22 07:01:51] 2025-11-22 12:00:57,012 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:01:51] 2025-11-22 12:00:57,021 | INFO     | cat /etc/os-release:
[2025-11-22 07:01:51] NAME="CentOS Linux"
[2025-11-22 07:01:51] VERSION="7 (Core)"
[2025-11-22 07:01:51] ID="centos"
[2025-11-22 07:01:51] ID_LIKE="rhel fedora"
[2025-11-22 07:01:51] VERSION_ID="7"
[2025-11-22 07:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:01:51] ANSI_COLOR="0;31"
[2025-11-22 07:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:01:51] HOME_URL="https://www.centos.org/"
[2025-11-22 07:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:01:51] 
[2025-11-22 07:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:01:51] 
[2025-11-22 07:01:51] 2025-11-22 12:00:57,021 | INFO     | ***************************************
[2025-11-22 07:01:51] 2025-11-22 12:00:57,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 07:01:51] 2025-11-22 12:00:57,539 | INFO     | sufficient remaining disk space (28255977472 B)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:01:51] 2025-11-22 12:00:57,539 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:01:51] 2025-11-22 12:00:57,540 | INFO     | update_server=False
[2025-11-22 07:01:51] 2025-11-22 12:00:57,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:01:51] 2025-11-22 12:00:57,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:01:51] 2025-11-22 12:00:57,541 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,541 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:01:51] 2025-11-22 12:00:57,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:01:51] 2025-11-22 12:00:57,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:01:51] 2025-11-22 12:00:57,744 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 07:01:51] 2025-11-22 12:00:57,744 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 07:01:51] 2025-11-22 12:00:57,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:01:51] 2025-11-22 12:00:57,744 | INFO     | will abort loop
[2025-11-22 07:01:51] 2025-11-22 12:00:57,985 | INFO     | all data control threads have been joined
[2025-11-22 07:01:51] 2025-11-22 12:00:58,340 | INFO     | all job control threads have been joined
[2025-11-22 07:01:51] 2025-11-22 12:00:58,403 | INFO     | all payload control threads have been joined
[2025-11-22 07:01:51] 2025-11-22 12:00:58,542 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:58,542 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:58,750 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:58,962 | INFO     | [job] validate thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:58,966 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:58,988 | INFO     | [data] control thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,046 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,047 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,077 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,319 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,345 | INFO     | [job] control thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,408 | INFO     | [payload] control thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,546 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,751 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:00:59,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:01:00,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:01:51] 2025-11-22 12:01:04,123 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:01:51] 2025-11-22 12:01:46,036 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:01:51] 2025-11-22 12:01:46,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867364902720)>', '<ExcThread(monitor, started 139866339796736)>']
[2025-11-22 07:01:51] 2025-11-22 12:01:46,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:01:51] 2025-11-22 12:01:46,737 | INFO     | [monitor] control thread has ended
[2025-11-22 07:01:51] 2025-11-22 12:01:51,626 | INFO     | all workflow threads have been joined
[2025-11-22 07:01:51] 2025-11-22 12:01:51,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:01:51] 2025-11-22 12:01:51,627 | INFO     | traces error code: 0
[2025-11-22 07:01:51] 2025-11-22 12:01:51,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:01:51] 2025-11-22 12:01:51,686 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:01:51] 2025-11-22 12:01:51,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:01:51] 2025-11-22 12:01:51,690 [wrapper] pilotpid: 19233
[2025-11-22 07:01:51] 2025-11-22 12:01:51,692 [wrapper] Pilot exit status: 0
[2025-11-22 07:01:51] 2025-11-22 12:01:51,698 [wrapper] pandaids: 6894283565
[2025-11-22 07:01:51] 2025-11-22 12:01:51,713 [wrapper] cleanup supervisor_pilot 32194 19234
[2025-11-22 07:01:51] 2025-11-22 12:01:51,715 [wrapper] Test setup, not cleaning
[2025-11-22 07:01:51] 2025-11-22 12:01:51,717 [wrapper] apfmon messages muted
[2025-11-22 07:01:51] 2025-11-22 12:01:51,719 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:01:51] 2025-11-22 12:01:51,721 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:01:51]  *** Error codes and diagnostics ***
[2025-11-22 07:01:51]     "exeErrorCode": 0,
[2025-11-22 07:01:51]     "exeErrorDiag": "",
[2025-11-22 07:01:51]     "pilotErrorCode": 0,
[2025-11-22 07:01:51]     "pilotErrorDiag": "",
[2025-11-22 07:01:51]  *** Listing of results directory ***
[2025-11-22 07:01:51] total 1303908
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 04:12 pilot3.tar.gz
[2025-11-22 07:01:51] -rwx------ 1 boincer umatlas     36292 Nov 21 04:24 runpilot2-wrapper.sh
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 04:24 queuedata.json
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas       100 Nov 21 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:01:51] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 22:01 run_atlas
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas       105 Nov 21 22:01 job.xml
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas 412480384 Nov 21 22:01 EVNT.47493127._002351.pool.root.1
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 22:01 start_atlas.sh
[2025-11-22 07:01:51] drwxrwx--x 2 boincer umatlas      4096 Nov 21 22:01 shared
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas    590102 Nov 21 22:01 input.tar.gz
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas         0 Nov 21 22:01 boinc_lockfile
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas      2783 Nov 21 22:01 pandaJob.out
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas        57 Nov 21 22:01 setup.sh.local
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas    989776 Nov 21 22:01 agis_schedconf.cvmfs.json
[2025-11-22 07:01:51] drwx------ 5 boincer umatlas      4096 Nov 21 22:01 pilot3
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas       532 Nov 22 06:55 boinc_task_state.xml
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas      6240 Nov 22 06:57 init_data.xml
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas 907058432 Nov 22 07:00 HITS.47533967._003221.pool.root.1
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas        95 Nov 22 07:00 pilot_heartbeat.json
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas      1052 Nov 22 07:00 memory_monitor_summary.json
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas   1526164 Nov 22 07:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas   1354620 Nov 22 07:00 log.47533967._003221.job.log.tgz.1
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas      8639 Nov 22 07:00 heartbeat.json
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas        29 Nov 22 07:01 wrapper_checkpoint.txt
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 07:01 boinc_mmap_file
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas      4738 Nov 22 07:01 pilotlog.txt
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas   4510905 Nov 22 07:01 log.47533967._003221.job.log.1
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas       353 Nov 22 07:01 output.list
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas       620 Nov 22 07:01 runtime_log
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas   5888000 Nov 22 07:01 result.tar.gz
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 07:01 runtime_log.err
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas       665 Nov 22 07:01 anRNDmNYcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOVHKDm8lFAdn.diag
[2025-11-22 07:01:51] -rw-r--r-- 1 boincer umatlas     21245 Nov 22 07:01 stderr.txt
[2025-11-22 07:01:51] HITS file was successfully produced:
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas 907058432 Nov 22 07:00 shared/HITS.pool.root.1
[2025-11-22 07:01:51]  *** Contents of shared directory: ***
[2025-11-22 07:01:51] total 1294972
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas 412480384 Nov 21 22:01 ATLAS.root_0
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 22:01 start_atlas.sh
[2025-11-22 07:01:51] -rw-r--r-- 2 boincer umatlas    590102 Nov 21 22:01 input.tar.gz
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas 907058432 Nov 22 07:00 HITS.pool.root.1
[2025-11-22 07:01:51] -rw------- 1 boincer umatlas   5888000 Nov 22 07:01 result.tar.gz
07:01:53 (15576): run_atlas exited; CPU time 127187.702473
07:01:53 (15576): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN