Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:49 (903139): wrapper (7.7.26015): starting
00:25:49 (903139): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 00:25:49] Arguments: --nthreads 4
[2025-11-27 00:25:49] Threads: 4
[2025-11-27 00:25:49] Checking for CVMFS
[2025-11-27 00:25:49] No cvmfs_config command found, will try listing directly
[2025-11-27 00:25:49] CVMFS is ok
[2025-11-27 00:25:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:25:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:25:49] Further information can be found at the LHC@home message board.
[2025-11-27 00:25:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:25:49] Checking for apptainer binary...
[2025-11-27 00:25:49] which: no apptainer in ((null))
[2025-11-27 00:25:49] apptainer is not installed, using version from CVMFS
[2025-11-27 00:25:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:25:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-11-27 00:25:49] apptainer works
[2025-11-27 00:25:49] Set ATHENA_PROC_NUMBER=4
[2025-11-27 00:25:49] Set ATHENA_CORE_NUMBER=4
[2025-11-27 00:25:49] Starting ATLAS job with PandaID=6893935578
[2025-11-27 00:25:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:52:03]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:52:03] 2025-11-27 05:48:42,118 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:52:03] 2025-11-27 05:48:42,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:52:03] 2025-11-27 05:48:42,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 06:52:03] 2025-11-27 05:48:42,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 06:52:03] 2025-11-27 05:48:42,125 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:52:03] 2025-11-27 05:48:42,126 | INFO     | sum of square deviations: 16483099750.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,129 | INFO     | sum of deviations: -134941926835.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,130 | INFO     | mean x: 1764211032.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,130 | INFO     | mean y: 2443806.1436170214
[2025-11-27 06:52:03] 2025-11-27 05:48:42,130 | INFO     | intersect: 14445481807.482826
[2025-11-27 06:52:03] 2025-11-27 05:48:42,130 | INFO     | chi2: 2.617141838887826
[2025-11-27 06:52:03] 2025-11-27 05:48:42,131 | INFO     | sum of square deviations: 15834231770.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,134 | INFO     | sum of deviations: -110577125787.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,134 | INFO     | mean x: 1764210880.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,135 | INFO     | mean y: 2449476.1105121295
[2025-11-27 06:52:03] 2025-11-27 05:48:42,135 | INFO     | intersect: 12322678914.848476
[2025-11-27 06:52:03] 2025-11-27 05:48:42,135 | INFO     | chi2: 1.959832139890456
[2025-11-27 06:52:03] 2025-11-27 05:48:42,135 | INFO     | current chi2=1.959832139890456 (change=25.115555039107047 %)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,136 | INFO     | sum of square deviations: 15202619927.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | sum of deviations: -108821711737.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | mean x: 1764210727.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | mean y: 2449899.975409836
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | intersect: 12630827912.960512
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | chi2: 1.956192648913823
[2025-11-27 06:52:03] 2025-11-27 05:48:42,140 | INFO     | current chi2=1.956192648913823 (change=0.1857042193846398 %)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,141 | INFO     | right removable region: 365
[2025-11-27 06:52:03] 2025-11-27 05:48:42,141 | INFO     | sum of square deviations: 15834231770.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,146 | INFO     | sum of deviations: -178870189651.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,146 | INFO     | mean x: 1764211185.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,147 | INFO     | mean y: 2454039.5229110513
[2025-11-27 06:52:03] 2025-11-27 05:48:42,147 | INFO     | intersect: 19931730927.03467
[2025-11-27 06:52:03] 2025-11-27 05:48:42,147 | INFO     | chi2: 1.3021566182301405
[2025-11-27 06:52:03] 2025-11-27 05:48:42,148 | INFO     | current chi2=1.3021566182301405 (change=50.24508802383054 %)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,148 | INFO     | sum of square deviations: 15202619927.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,152 | INFO     | sum of deviations: -165366941670.00003
[2025-11-27 06:52:03] 2025-11-27 05:48:42,152 | INFO     | mean x: 1764211337.5
[2025-11-27 06:52:03] 2025-11-27 05:48:42,152 | INFO     | mean y: 2450772.601092896
[2025-11-27 06:52:03] 2025-11-27 05:48:42,152 | INFO     | intersect: 19192711052.290325
[2025-11-27 06:52:03] 2025-11-27 05:48:42,153 | INFO     | chi2: 1.2878831624334643
[2025-11-27 06:52:03] 2025-11-27 05:48:42,153 | INFO     | current chi2=1.2878831624334643 (change=1.0961397113717621 %)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,153 | INFO     | left removable region: 20
[2025-11-27 06:52:03] 2025-11-27 05:48:42,153 | INFO     | sum of square deviations: 12733038740.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,156 | INFO     | sum of deviations: -102712788260.99998
[2025-11-27 06:52:03] 2025-11-27 05:48:42,157 | INFO     | mean x: 1764211307.0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,157 | INFO     | mean y: 2447695.6608695653
[2025-11-27 06:52:03] 2025-11-27 05:48:42,157 | INFO     | intersect: 14233698076.94676
[2025-11-27 06:52:03] 2025-11-27 05:48:42,157 | INFO     | chi2: 0.5315305501385923
[2025-11-27 06:52:03] 2025-11-27 05:48:42,158 | INFO     | current memory leak: -8.07 B/s (using 345 data points, chi2=0.53)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,159 | INFO     | could have reported an average CPU frequency of 2699 MHz (16 samples)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,159 | INFO     | ..............................
[2025-11-27 06:52:03] 2025-11-27 05:48:42,159 | INFO     | . Timing measurements:
[2025-11-27 06:52:03] 2025-11-27 05:48:42,159 | INFO     | . get job = 0 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . initial setup = 1 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . payload setup = 9 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . stage-in = 0 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . payload execution = 22919 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . stage-out = 1 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | . log creation = 0 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,160 | INFO     | ..............................
[2025-11-27 06:52:03] 2025-11-27 05:48:42,305 | INFO     | 
[2025-11-27 06:52:03] 2025-11-27 05:48:42,305 | INFO     | job summary report
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | --------------------------------------------------
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | PanDA job id: 6893935578
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | task id: 47523634
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | errors: (none)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | pilot state: finished 
[2025-11-27 06:52:03] 2025-11-27 05:48:42,306 | INFO     | transexitcode: 0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | exeerrorcode: 0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | exeerrordiag: 
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | exitcode: 0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | exitmsg: OK
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | cpuconsumptiontime: 88771 s
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | nevents: 400
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | neventsw: 0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | pid: 914914
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | pgrp: 914914
[2025-11-27 06:52:03] 2025-11-27 05:48:42,307 | INFO     | corecount: 4
[2025-11-27 06:52:03] 2025-11-27 05:48:42,308 | INFO     | event service: False
[2025-11-27 06:52:03] 2025-11-27 05:48:42,308 | INFO     | sizes: {0: 2283087, 1: 2283955, 7: 2284217, 12: 2284245, 22932: 2320095, 22933: 2320094, 22934: 2329356, 22943: 2329522}
[2025-11-27 06:52:03] 2025-11-27 05:48:42,308 | INFO     | --------------------------------------------------
[2025-11-27 06:52:03] 2025-11-27 05:48:42,308 | INFO     | 
[2025-11-27 06:52:03] 2025-11-27 05:48:42,308 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-11-27 06:52:03] 2025-11-27 05:48:42,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:52:03] 2025-11-27 05:48:42,348 | INFO     | job 6893935578 has completed (purged errors)
[2025-11-27 06:52:03] 2025-11-27 05:48:42,348 | INFO     | overall cleanup function is called
[2025-11-27 06:52:03] 2025-11-27 05:48:43,045 | INFO     | number of running child processes to parent process 914914: 1
[2025-11-27 06:52:03] 2025-11-27 05:48:43,045 | INFO     | maximum number of monitored processes: 6
[2025-11-27 06:52:03] 2025-11-27 05:48:43,045 | INFO     | aborting job monitoring since job object (job id=6893935578) has expired
[2025-11-27 06:52:03] 2025-11-27 05:48:43,359 | INFO     | --- collectZombieJob: --- 10, [914914]
[2025-11-27 06:52:03] 2025-11-27 05:48:43,359 | INFO     | zombie collector waiting for pid 914914
[2025-11-27 06:52:03] 2025-11-27 05:48:43,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:52:03] 2025-11-27 05:48:43,359 | INFO     | collected zombie processes
[2025-11-27 06:52:03] 2025-11-27 05:48:43,360 | INFO     | will attempt to kill all subprocesses of pid=914914
[2025-11-27 06:52:03] 2025-11-27 05:48:44,183 | INFO     | process IDs to be killed: [914914] (in reverse order)
[2025-11-27 06:52:03] 2025-11-27 05:48:44,436 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:52:03] 2025-11-27 05:48:44,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:52:03] 2025-11-27 05:48:44,472 | INFO     | did not find any defunct processes belonging to 914914
[2025-11-27 06:52:03] 2025-11-27 05:48:44,505 | INFO     | did not find any defunct processes belonging to 914914
[2025-11-27 06:52:03] 2025-11-27 05:48:44,507 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:52:03] 2025-11-27 05:48:44,507 | INFO     | ready for new job
[2025-11-27 06:52:03] 2025-11-27 05:48:44,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:52:03] 2025-11-27 05:48:44,511 | INFO     | ***************************************
[2025-11-27 06:52:03] 2025-11-27 05:48:44,511 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:52:03] 2025-11-27 05:48:44,511 | INFO     | ***************************************
[2025-11-27 06:52:03] 2025-11-27 05:48:44,511 | INFO     | 
[2025-11-27 06:52:03] 2025-11-27 05:48:44,519 | INFO     | architecture information:
[2025-11-27 06:52:03] 2025-11-27 05:48:44,520 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:52:03] 2025-11-27 05:48:44,544 | INFO     | cat /etc/os-release:
[2025-11-27 06:52:03] NAME="CentOS Linux"
[2025-11-27 06:52:03] VERSION="7 (Core)"
[2025-11-27 06:52:03] ID="centos"
[2025-11-27 06:52:03] ID_LIKE="rhel fedora"
[2025-11-27 06:52:03] VERSION_ID="7"
[2025-11-27 06:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:52:03] ANSI_COLOR="0;31"
[2025-11-27 06:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:52:03] HOME_URL="https://www.centos.org/"
[2025-11-27 06:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:52:03] 
[2025-11-27 06:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:52:03] 
[2025-11-27 06:52:03] 2025-11-27 05:48:44,544 | INFO     | ***************************************
[2025-11-27 06:52:03] 2025-11-27 05:48:45,047 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-11-27 06:52:03] 2025-11-27 05:48:45,074 | INFO     | sufficient remaining disk space (3285262008320 B)
[2025-11-27 06:52:03] 2025-11-27 05:48:45,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:52:03] 2025-11-27 05:48:45,074 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:52:03] 2025-11-27 05:48:45,074 | INFO     | update_server=False
[2025-11-27 06:52:03] 2025-11-27 05:48:45,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:52:03] 2025-11-27 05:48:45,548 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 06:52:03] 2025-11-27 05:48:45,548 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 06:52:03] 2025-11-27 05:48:45,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:52:03] 2025-11-27 05:48:45,548 | INFO     | will abort loop
[2025-11-27 06:52:03] 2025-11-27 05:48:45,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:52:03] 2025-11-27 05:48:45,804 | INFO     | all data control threads have been joined
[2025-11-27 06:52:03] 2025-11-27 05:48:45,812 | INFO     | all payload control threads have been joined
[2025-11-27 06:52:03] 2025-11-27 05:48:45,813 | INFO     | all job control threads have been joined
[2025-11-27 06:52:03] 2025-11-27 05:48:46,080 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,553 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,615 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,718 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,741 | INFO     | [job] validate thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,809 | INFO     | [data] control thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,817 | INFO     | [payload] control thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,818 | INFO     | [job] control thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,829 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:46,945 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:47,071 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:47,156 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:47,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:52:03] 2025-11-27 05:48:47,450 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:47,805 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:48,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:52:03] 2025-11-27 05:48:48,284 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:48:52,125 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:52:03] 2025-11-27 05:49:15,214 | INFO     | PID=907531 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 06:52:03] 2025-11-27 05:49:15,214 | INFO     | .. there are 5 such processes running
[2025-11-27 06:52:03] 2025-11-27 05:49:15,214 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:52:03] 2025-11-27 05:49:15,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:52:03] 2025-11-27 05:49:15,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:52:03] 2025-11-27 05:49:37,894 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:52:03] 2025-11-27 05:49:38,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22378421200704)>', '<ExcThread(monitor, started 22377977063168)>']
[2025-11-27 06:52:03] 2025-11-27 05:49:39,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:52:03] 2025-11-27 05:49:39,334 | INFO     | [monitor] control thread has ended
[2025-11-27 06:52:03] 2025-11-27 05:49:43,501 | INFO     | all workflow threads have been joined
[2025-11-27 06:52:03] 2025-11-27 05:49:43,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:52:03] 2025-11-27 05:49:43,502 | INFO     | traces error code: 0
[2025-11-27 06:52:03] 2025-11-27 05:49:43,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:52:03] 2025-11-27 05:49:43,669 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:52:03] 2025-11-27 05:49:43,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:52:03] 2025-11-27 05:49:43,677 [wrapper] pilotpid: 907531
[2025-11-27 06:52:03] 2025-11-27 05:49:43,681 [wrapper] Pilot exit status: 0
[2025-11-27 06:52:03] 2025-11-27 05:49:43,698 [wrapper] pandaids: 6893935578
[2025-11-27 06:52:03] 2025-11-27 05:49:43,875 [wrapper] cleanup supervisor_pilot 1477514 907532
[2025-11-27 06:52:03] 2025-11-27 05:49:43,879 [wrapper] Test setup, not cleaning
[2025-11-27 06:52:03] 2025-11-27 05:49:43,883 [wrapper] apfmon messages muted
[2025-11-27 06:52:03] 2025-11-27 05:49:43,887 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:52:03] 2025-11-27 05:49:43,890 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:52:03]  *** Error codes and diagnostics ***
[2025-11-27 06:52:03]     "exeErrorCode": 0,
[2025-11-27 06:52:03]     "exeErrorDiag": "",
[2025-11-27 06:52:03]     "pilotErrorCode": 0,
[2025-11-27 06:52:03]     "pilotErrorDiag": "",
[2025-11-27 06:52:03]  *** Listing of results directory ***
[2025-11-27 06:52:03] total 626796
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc    576529 Nov 21 10:12 pilot3.tar.gz
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc      5112 Nov 21 10:19 queuedata.json
[2025-11-27 06:52:03] -rwx------ 1 boinc boinc     36292 Nov 21 10:21 runpilot2-wrapper.sh
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc       100 Nov 27 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:52:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 00:25 run_atlas
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc       105 Nov 27 00:25 job.xml
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc      6687 Nov 27 00:25 init_data.xml
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc 298610588 Nov 27 00:25 EVNT.47523632._000004.pool.root.1
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:25 start_atlas.sh
[2025-11-27 06:52:03] drwxrwx--x 2 boinc boinc      4096 Nov 27 00:25 shared
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc    589956 Nov 27 00:25 input.tar.gz
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:25 boinc_lockfile
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc      2628 Nov 27 00:25 pandaJob.out
[2025-11-27 06:52:03] -rw------- 1 boinc boinc    991538 Nov 27 00:26 agis_schedconf.cvmfs.json
[2025-11-27 06:52:03] drwx------ 5 boinc boinc      4096 Nov 27 00:26 pilot3
[2025-11-27 06:52:03] -rw------- 1 boinc boinc 331965498 Nov 27 06:47 HITS.47523634._000089.pool.root.1
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc       529 Nov 27 06:47 boinc_task_state.xml
[2025-11-27 06:52:03] -rw------- 1 boinc boinc      1035 Nov 27 06:48 memory_monitor_summary.json
[2025-11-27 06:52:03] -rw------- 1 boinc boinc        95 Nov 27 06:48 pilot_heartbeat.json
[2025-11-27 06:52:03] -rw------- 1 boinc boinc   1516240 Nov 27 06:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:52:03] -rw------- 1 boinc boinc    523609 Nov 27 06:48 log.47523634._000089.job.log.tgz.1
[2025-11-27 06:52:03] -rw------- 1 boinc boinc      7788 Nov 27 06:48 heartbeat.json
[2025-11-27 06:52:03] -rw------- 1 boinc boinc      5020 Nov 27 06:49 pilotlog.txt
[2025-11-27 06:52:03] -rw------- 1 boinc boinc   3149518 Nov 27 06:49 log.47523634._000089.job.log.1
[2025-11-27 06:52:03] -rw------- 1 boinc boinc       357 Nov 27 06:49 output.list
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc       620 Nov 27 06:49 runtime_log
[2025-11-27 06:52:03] -rw------- 1 boinc boinc   3696640 Nov 27 06:49 result.tar.gz
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc      9223 Nov 27 06:49 runtime_log.err
[2025-11-27 06:52:03] -rw------- 1 boinc boinc       667 Nov 27 06:49 hKxKDmPVcg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFFJKDmLgUvXo.diag
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc        27 Nov 27 06:51 wrapper_checkpoint.txt
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc      8192 Nov 27 06:52 boinc_mmap_file
[2025-11-27 06:52:03] -rw-r--r-- 1 boinc boinc     20945 Nov 27 06:52 stderr.txt
[2025-11-27 06:52:03] HITS file was successfully produced:
[2025-11-27 06:52:03] -rw------- 1 boinc boinc 331965498 Nov 27 06:47 shared/HITS.pool.root.1
[2025-11-27 06:52:03]  *** Contents of shared directory: ***
[2025-11-27 06:52:03] total 620016
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc 298610588 Nov 27 00:25 ATLAS.root_0
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:25 start_atlas.sh
[2025-11-27 06:52:03] -rw-r--r-- 2 boinc boinc    589956 Nov 27 00:25 input.tar.gz
[2025-11-27 06:52:03] -rw------- 1 boinc boinc 331965498 Nov 27 06:47 HITS.pool.root.1
[2025-11-27 06:52:03] -rw------- 1 boinc boinc   3696640 Nov 27 06:49 result.tar.gz
06:52:04 (903139): run_atlas exited; CPU time 90440.026464
06:52:04 (903139): called boinc_finish(0)

</stderr_txt>
]]>

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